Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A03
         (230 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p...    28   6.1  
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.         28   6.1  
AF104918-1|AAD17932.1| 1010|Homo sapiens myeloid/lymphoid leukem...    28   6.1  
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.     28   6.1  

>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
           protein.
          Length = 2715

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 225 GSPQAPDPEPQPRD 184
           G+P+AP+PEP P D
Sbjct: 672 GAPEAPEPEPPPAD 685


>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
          Length = 2605

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 225 GSPQAPDPEPQPRD 184
           G+P+AP+PEP P D
Sbjct: 562 GAPEAPEPEPPPAD 575


>AF104918-1|AAD17932.1| 1010|Homo sapiens myeloid/lymphoid leukemia
           2 protein.
          Length = 1010

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 225 GSPQAPDPEPQPRD 184
           G+P+AP+PEP P D
Sbjct: 10  GAPEAPEPEPPPAD 23


>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
          Length = 2415

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 225 GSPQAPDPEPQPRD 184
           G+P+AP+PEP P D
Sbjct: 372 GAPEAPEPEPPPAD 385


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,942,857
Number of Sequences: 237096
Number of extensions: 456654
Number of successful extensions: 1135
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 76,859,062
effective HSP length: 55
effective length of database: 63,818,782
effective search space used: 1340194422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)