Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A03
         (230 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023118-1|AAY55534.1|  221|Drosophila melanogaster IP08740p pro...    27   4.7  
BT022978-1|AAY55394.1|  151|Drosophila melanogaster IP08440p pro...    27   4.7  
AL138971-5|CAB72283.1|  295|Drosophila melanogaster EG:BACR43E12...    27   4.7  
AE014298-474|AAF45832.1|  215|Drosophila melanogaster CG3526-PA,...    27   4.7  
AE014298-473|AAN09090.1|  294|Drosophila melanogaster CG3526-PB,...    27   4.7  

>BT023118-1|AAY55534.1|  221|Drosophila melanogaster IP08740p
           protein.
          Length = 221

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  CLCVVCVAL*TPIPMH-TKVGRTLMPMPRHKLIGE 136
           C+C VC A+    P H   +   LM  P H+  G+
Sbjct: 123 CICPVCAAVPLSQPSHIAHIANHLMFSPSHRATGD 157


>BT022978-1|AAY55394.1|  151|Drosophila melanogaster IP08440p
           protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  CLCVVCVAL*TPIPMH-TKVGRTLMPMPRHKLIGE 136
           C+C VC A+    P H   +   LM  P H+  G+
Sbjct: 53  CICPVCAAVPLSQPSHIAHIANHLMFSPSHRATGD 87


>AL138971-5|CAB72283.1|  295|Drosophila melanogaster EG:BACR43E12.4
           protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  CLCVVCVAL*TPIPMH-TKVGRTLMPMPRHKLIGE 136
           C+C VC A+    P H   +   LM  P H+  G+
Sbjct: 197 CICPVCAAVPLSQPSHIAHIANHLMFSPSHRATGD 231


>AE014298-474|AAF45832.1|  215|Drosophila melanogaster CG3526-PA,
           isoform A protein.
          Length = 215

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  CLCVVCVAL*TPIPMH-TKVGRTLMPMPRHKLIGE 136
           C+C VC A+    P H   +   LM  P H+  G+
Sbjct: 117 CICPVCAAVPLSQPSHIAHIANHLMFSPSHRATGD 151


>AE014298-473|AAN09090.1|  294|Drosophila melanogaster CG3526-PB,
           isoform B protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  CLCVVCVAL*TPIPMH-TKVGRTLMPMPRHKLIGE 136
           C+C VC A+    P H   +   LM  P H+  G+
Sbjct: 196 CICPVCAAVPLSQPSHIAHIANHLMFSPSHRATGD 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,987,868
Number of Sequences: 53049
Number of extensions: 141638
Number of successful extensions: 387
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)