Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A03
         (230 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   0.65 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   0.65 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   2.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   3.5  
AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly pro...    20   3.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   3.5  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       19   6.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   8.0  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 126 SLCLGIGISVRPTLVCI 76
           +LC+ I +S   TLVC+
Sbjct: 739 TLCVAISLSATVTLVCL 755


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 126 SLCLGIGISVRPTLVCI 76
           +LC+ I +S   TLVC+
Sbjct: 829 TLCVAISLSATVTLVCL 845


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 225  GSPQAPDPEPQPRD 184
            GSP+ P P P+  D
Sbjct: 1855 GSPEPPPPPPRNHD 1868


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
          RJP57-1 protein.
          Length = 544

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 87 LVCIGIGVQRATQTTQRHR 31
          +VC+GI  Q  T     H+
Sbjct: 8  VVCLGIACQDVTSAAVNHQ 26


>AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly
          protein MRJP3 protein.
          Length = 31

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 87 LVCIGIGVQRATQTTQRHR 31
          +VC+GI  Q  T     H+
Sbjct: 8  VVCLGIACQDVTSAAVNHQ 26


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
          protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 87 LVCIGIGVQRATQTTQR 37
          +VC+GI  Q  T  T R
Sbjct: 8  VVCLGIACQGITSVTVR 24


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 213 APDPEPQP 190
           AP+PEP P
Sbjct: 22  APEPEPAP 29


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 228 DGSPQAPDPEPQPRD 184
           + SP++P+  P P +
Sbjct: 735 EASPRSPNASPSPAE 749


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,933
Number of Sequences: 438
Number of extensions: 838
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3785850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)