Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A02
(307 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110... 29 0.72
01_02_0063 - 10746968-10747783,10747995-10748222 29 0.95
08_02_0796 - 21300251-21300373,21300846-21301721 28 1.3
07_03_0851 + 22012836-22014017,22016668-22016734,22016774-220168... 28 1.3
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052... 28 1.7
12_02_0819 + 23432681-23432998,23433118-23433348 27 2.2
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 27 2.2
03_06_0144 - 31969609-31969866,31969961-31970371,31970472-319705... 27 2.9
02_04_0460 - 23118221-23118406,23118417-23118671,23118763-231188... 27 2.9
01_05_0289 + 20482472-20482603,20483175-20483345,20483501-204835... 27 2.9
12_02_1169 - 26655170-26655332,26655429-26655504,26655603-266557... 27 3.8
01_01_0443 - 3314002-3314565 27 3.8
12_02_1064 - 25771870-25772102,25772222-25772375,25772487-257725... 26 5.1
01_02_0058 - 10699702-10700517,10700997-10701206 26 5.1
12_02_0145 - 14381089-14381154,14381351-14381494,14384678-14385547 26 6.7
02_04_0313 - 21947115-21948021,21948102-21948172 26 6.7
01_02_0006 + 10118766-10118775,10119383-10119526,10120534-101206... 26 6.7
10_08_0479 - 18199310-18199348,18199938-18200255 25 8.9
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 25 8.9
06_03_1339 + 29445324-29445395,29445487-29445598,29445673-294457... 25 8.9
04_04_1477 + 33873976-33874080,33874433-33874544,33874777-338748... 25 8.9
03_04_0193 + 18344984-18345946 25 8.9
02_05_0932 - 32841331-32842242 25 8.9
>11_03_0150 +
10810322-10810380,10810530-10810593,10810803-10811047,
10811627-10811747,10811821-10811895,10811986-10812112,
10812194-10812939,10813065-10813195,10813547-10813636,
10814000-10814105
Length = 587
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 159 QLEDSERLRGPGHEYRDQNSRYQAESS 79
+LE SER R P YR Q+S+ Q SS
Sbjct: 421 RLESSERQRPPSQSYRPQSSQGQRPSS 447
>01_02_0063 - 10746968-10747783,10747995-10748222
Length = 347
Score = 28.7 bits (61), Expect = 0.95
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 123 HEYRDQNSRYQAESSDSLLPSKRQPTPE 40
HEY D + + ++ SDSLL + P PE
Sbjct: 303 HEYADNATLWDSDFSDSLLKLSQLPMPE 330
>08_02_0796 - 21300251-21300373,21300846-21301721
Length = 332
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 159 QLEDSERLRGPGHEYRDQNSRYQAESSDS 73
Q +++R+RGPGH + D + +S DS
Sbjct: 145 QSPETDRVRGPGHHHDDDAAADDDDSEDS 173
>07_03_0851 +
22012836-22014017,22016668-22016734,22016774-22016868,
22017304-22017717
Length = 585
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -2
Query: 219 GEYGGAFHPRFSLSAQISCNQLEDSERLRGPGHEYRDQNSRYQAESSDSLLPSK---RQP 49
G GG F +S+ + + E E++ H YR R E L S+ +
Sbjct: 315 GSVGGTFDLHYSIWGKEGATRREQMEKIIPLDHGYR-YYIRGAMEKHLLLARSRGEGEED 373
Query: 48 TPELPDTSCWSV 13
TPE PD C+S+
Sbjct: 374 TPEEPDLECFSL 385
>02_03_0235 -
16702768-16702956,16703956-16704492,16705084-16705233,
16705310-16705625,16707005-16707286,16707895-16707971,
16708121-16708186,16708700-16709246,16709435-16709565,
16709642-16709746,16709859-16710039,16710123-16710185,
16711000-16711109,16711576-16711638,16711859-16712191
Length = 1049
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 131 DLVMNTEIKIVVIRQNHRIPFYH-PNGSQHQ 42
DL T++ IVV HRIP YH N SQ Q
Sbjct: 827 DLSRKTDLVIVVHNLAHRIPQYHQSNTSQPQ 857
>12_02_0819 + 23432681-23432998,23433118-23433348
Length = 182
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 30 YLVILVLAAVWMVEGNPMILPD--NDYFDLGIHDQVLG 137
Y V AA W V G +LP+ +FD G HDQ G
Sbjct: 73 YSAFEVAAAAWEVAGGATLLPEAMQLWFDFG-HDQGFG 109
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 201 TLHRILHGNDNKHEQDDNSSKAKHPAAE 284
TL ++HGN N+H D + H +AE
Sbjct: 513 TLFSLIHGNHNQHISLDTRLRIAHESAE 540
>03_06_0144 -
31969609-31969866,31969961-31970371,31970472-31970542,
31970637-31970723,31970816-31971389
Length = 466
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 300 YPF*RSLQQDAWLSNYCRPVHACCHYHGEYGGAFHPR 190
+P+ S +D L + RP A G+YGG PR
Sbjct: 312 HPWPASFMEDDSLVEWARPAMARALADGDYGGVADPR 348
>02_04_0460 -
23118221-23118406,23118417-23118671,23118763-23118851,
23119527-23119605,23121317-23121484,23121760-23122137
Length = 384
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 117 YRDQNSRYQAESSDSLLPSKRQPTPELP 34
Y D+ SR+++ SSD L P P +LP
Sbjct: 67 YLDELSRWESLSSDVLAPLPAAPAADLP 94
>01_05_0289 +
20482472-20482603,20483175-20483345,20483501-20483530,
20483640-20483847,20483952-20484033,20484128-20484236,
20484329-20484745
Length = 382
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 21 NMRYLVILVLAAVWMVEGNPMILPDNDYFDLGIHDQVLGVFPNLLTDYMKFERSVRSV 194
N ++L + V+G +L ++ H V GV P L+ Y F SVR++
Sbjct: 69 NFKWLDGFTIQGTGTVDGQSTLLRSVSPANVSQHWYVSGVKPTLIRFYSSFNVSVRNI 126
>12_02_1169 -
26655170-26655332,26655429-26655504,26655603-26655715,
26655808-26655913,26656001-26656235,26656415-26656573,
26657279-26657377,26657472-26657568,26657650-26657768,
26657860-26658000,26658100-26658184,26658287-26658488,
26659274-26659379
Length = 566
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 186 SLSAQISCNQLEDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPT 46
SL A +Q D E++RGP + + ES + L K+Q T
Sbjct: 368 SLEASFRLSQEYDEEKVRGPPVDANHEQLSSVVESINDTLIEKKQDT 414
>01_01_0443 - 3314002-3314565
Length = 187
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -2
Query: 225 YHGEYGGAFHPRFSLSAQISCNQLEDSERLRGPGHEYRDQNSRYQAESSDSLL 67
+ G+ A H R S + CN + G RD+ R+ E D+++
Sbjct: 118 FMGDPSKACHVRLQASPEFKCNNPTNINYSSIEGASLRDEGKRWTGEGYDNVM 170
>12_02_1064 -
25771870-25772102,25772222-25772375,25772487-25772569,
25772669-25772762,25773647-25773799,25774388-25774510
Length = 279
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 120 HDQVLGVFPNLLTDYMKFERSVRSVGET 203
H+Q L V P +TD E + S+GET
Sbjct: 74 HEQRLAVLPLDVTDESTIEAAAASIGET 101
>01_02_0058 - 10699702-10700517,10700997-10701206
Length = 341
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 159 QLEDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPTP 43
QL + RG HEY D + + + + SLL + P P
Sbjct: 286 QLLTQDEARGHVHEYADNAALWDHDFAASLLKLSKLPMP 324
>12_02_0145 - 14381089-14381154,14381351-14381494,14384678-14385547
Length = 359
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 183 LSAQISCNQLEDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPT-PELPDTSCWS 16
L + +ED + +G G E+ S+ ++ S +L R PT + T+ WS
Sbjct: 169 LEPSCPASPVEDGDSNQGGGAEFGISTSKSRSISGSKVLLRNRSPTSKKAAKTTVWS 225
>02_04_0313 - 21947115-21948021,21948102-21948172
Length = 325
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -2
Query: 219 GEYGGAFHPRFSLSAQISCNQLEDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPTP 43
G GGA + S + +Q ++ +G HE R Q R SS P +R P P
Sbjct: 181 GGGGGAATDQASSPTDQTADQENPGQQQQGEQHELRVQIDRRDQPSSPE--PPRRSPDP 237
>01_02_0006 +
10118766-10118775,10119383-10119526,10120534-10120659,
10120885-10121003,10121355-10121609
Length = 217
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 108 QNSRYQAESSDSLLPSKRQPTPELPDTS 25
+ S +Q E DS++ + R+ TPEL +S
Sbjct: 187 KKSAHQDEEHDSMIGATREVTPELTPSS 214
>10_08_0479 - 18199310-18199348,18199938-18200255
Length = 118
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 192 VGETLHRILHGNDNKHEQDDNSSKAKHPAAEIVRKGI 302
V ET H H +H+ S + H AA +VR G+
Sbjct: 25 VVETRHAQHHEKPPRHQSACLSRRRLHHAAHVVRTGV 61
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 222 HGEYGGAFHPRFSLSAQISCNQLEDSERLRGPGHE 118
HG +GG +HP +++ L+ + + G G E
Sbjct: 804 HGTFGGIYHPAQTMAGAAVHPLLQPPQAIAGVGGE 838
>06_03_1339 +
29445324-29445395,29445487-29445598,29445673-29445756,
29446156-29446182,29446879-29446966,29447070-29447151,
29447414-29447434,29448412-29448605,29449419-29449560,
29449805-29449889,29450123-29450250,29450940-29451032,
29451095-29451327,29453384-29453564,29454122-29454169
Length = 529
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 MILPDNDYFDLGIHDQVLGVFPNLLTDYMKFERSVRS-VGETLHRILHGNDNKHEQDDNS 257
+IL ND D+ + + L +D E +VRS +GE ++RI+ ND K + N+
Sbjct: 391 LILSSNDQ---EFQDECIALL-GLGSDQDLTEGAVRSCIGEKMNRIVEMNDTKENVEHNA 446
>04_04_1477 +
33873976-33874080,33874433-33874544,33874777-33874874,
33875548-33876261,33876348-33876518,33876955-33877011,
33877096-33878718
Length = 959
Score = 25.4 bits (53), Expect = 8.9
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3
Query: 30 YLVILVLAAVWMVEGNPMILPDNDYFDLG---IHDQVLGVFPNL---LTDYMKFERSVRS 191
YL++ VL V+ N P + ++G Q G P + ++D ++ RS
Sbjct: 62 YLLLKVLLTVYEKSSNRRRQPHHSVGEMGSGIFTGQPRGSVPTINKAISDKSRWSFRRRS 121
Query: 192 VGETLHRILHGNDNKHEQDDNSSKAK 269
T HR+L +D + +SSKAK
Sbjct: 122 ---TRHRVLKNSDISEPETLSSSKAK 144
>03_04_0193 + 18344984-18345946
Length = 320
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 186 SLSAQISCNQLEDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQP 49
S S+ SC S++ R N +A SSD+LLP +R+P
Sbjct: 110 SSSSSSSCVSRSTSQKSASSDTAGRS-NQPSKAASSDALLPPRRRP 154
>02_05_0932 - 32841331-32842242
Length = 303
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 165 CNQLEDS-ERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPTPELPDTS 25
CN L S +R P + + R + + SLL QP P +P+++
Sbjct: 61 CNNLSPSASSVRSPRLQKTPRPCRVRPDPQPSLLLPPPQPPPPMPEST 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,904,929
Number of Sequences: 37544
Number of extensions: 170508
Number of successful extensions: 574
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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