Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A02
(307 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical pr... 29 0.64
DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein. 29 0.64
DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein. 29 0.64
DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein. 29 0.64
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 1.5
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 1.5
U97403-9|AAB52469.1| 389|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 27 3.4
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 27 3.4
AC024788-1|AAF60612.2| 235|Caenorhabditis elegans Hypothetical ... 26 4.5
Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical pr... 26 6.0
U55370-5|AAA97996.1| 176|Caenorhabditis elegans Taf (tbp-associ... 26 6.0
U55370-4|AAK82906.1| 179|Caenorhabditis elegans Taf (tbp-associ... 26 6.0
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 26 6.0
Z81078-1|CAB03075.3| 441|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 25 7.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 25 7.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 25 7.9
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 25 7.9
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 25 7.9
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 25 7.9
>U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical
protein T20B5.3 protein.
Length = 837
Score = 29.1 bits (62), Expect = 0.64
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 36 VILVLAAVWMVEGNPMILPDNDYFD 110
V+L+ A WM++GN + P+N+ F+
Sbjct: 543 VLLIAVARWMMQGNALDNPENNLFE 567
>DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein.
Length = 856
Score = 29.1 bits (62), Expect = 0.64
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 36 VILVLAAVWMVEGNPMILPDNDYFD 110
V+L+ A WM++GN + P+N+ F+
Sbjct: 560 VLLIAVARWMMQGNALDNPENNLFE 584
>DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein.
Length = 854
Score = 29.1 bits (62), Expect = 0.64
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 36 VILVLAAVWMVEGNPMILPDNDYFD 110
V+L+ A WM++GN + P+N+ F+
Sbjct: 560 VLLIAVARWMMQGNALDNPENNLFE 584
>DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein.
Length = 870
Score = 29.1 bits (62), Expect = 0.64
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 36 VILVLAAVWMVEGNPMILPDNDYFD 110
V+L+ A WM++GN + P+N+ F+
Sbjct: 576 VLLIAVARWMMQGNALDNPENNLFE 600
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +3
Query: 51 AAVWMVEGNPMILPDNDYFDLGIHDQVLGVFPNLLTDYMKFERSVRSVGETLHRILHGND 230
AA +V+ + D ++ I D+++ ++ + R R +GE H++ H N
Sbjct: 2484 AAERLVQSAQQEMIARDDRNIAISDRLVNGIAQVMDAQEEVLRKERELGEARHKLAHLNK 2543
Query: 231 NKHEQD 248
++E+D
Sbjct: 2544 ARYERD 2549
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +3
Query: 51 AAVWMVEGNPMILPDNDYFDLGIHDQVLGVFPNLLTDYMKFERSVRSVGETLHRILHGND 230
AA +V+ + D ++ I D+++ ++ + R R +GE H++ H N
Sbjct: 2484 AAERLVQSAQQEMIARDDRNIAISDRLVNGIAQVMDAQEEVLRKERELGEARHKLAHLNK 2543
Query: 231 NKHEQD 248
++E+D
Sbjct: 2544 ARYERD 2549
>U97403-9|AAB52469.1| 389|Caenorhabditis elegans Hypothetical
protein T10E9.1 protein.
Length = 389
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 215 NTVERFTHASH*ALKFHVIS*KIRKDSEDLVMNTEIKIVVIRQ-NHRIPFYHPNGSQHQN 39
+T+ T+ ALK VIS K +K + DL+ + K V R ++ +P+G +N
Sbjct: 215 STITTATYEDVMALKASVISLKSKKFTGDLICDVIEKFVATRSTGSKLDIMNPSGLDFEN 274
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = -3
Query: 77 IPFYH--PNGSQHQNYQIPHV 21
+P +H P+ HQ+YQ+PH+
Sbjct: 19 VPMHHVYPSHHHHQHYQLPHL 39
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = -3
Query: 77 IPFYH--PNGSQHQNYQIPHV 21
+P +H P+ HQ+YQ+PH+
Sbjct: 19 VPMHHVYPSHHHHQHYQLPHL 39
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = -3
Query: 77 IPFYH--PNGSQHQNYQIPHV 21
+P +H P+ HQ+YQ+PH+
Sbjct: 19 VPMHHVYPSHHHHQHYQLPHL 39
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 152 KIRKDSEDLVMNTEIKIVVIRQNH 81
K+R+D ED +N+E + +R+ H
Sbjct: 1183 KLRQDLEDAAINSETSMAALRKKH 1206
>AC024788-1|AAF60612.2| 235|Caenorhabditis elegans Hypothetical
protein Y46E12A.3 protein.
Length = 235
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 108 DLGIHDQVLGVFPNLLTDYMKFERSVRSVGETLHRILHGNDNKHEQDDNSSKAKHPAAEI 287
D+ + D +LG + N + E R G + R+ HG+ +H+Q+ SS ++P +
Sbjct: 160 DVKLLDNILGKYQNQAPSSVCSECGNR--GYIVCRMCHGSRRRHQQNATSS-VENPFGLV 216
Query: 288 VR 293
+R
Sbjct: 217 LR 218
>Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical
protein ZK1307.7 protein.
Length = 436
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 6 RVKHSNMRYLVILVLAAVWMVEGNPMILPDNDYFD 110
R +HS++ YL+ L +A +++ ++ P N Y D
Sbjct: 72 RHRHSHLVYLMFLSVADIFLSAAYILLFPVNLYMD 106
>U55370-5|AAA97996.1| 176|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 10,
isoform a protein.
Length = 176
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 162 YMKFERSVRSVGETLHRILHGNDNKHEQDDNSSKAKHPAAE 284
Y E SV+++ +LH+ L GN + Q + K+P+ +
Sbjct: 34 YSTLEPSVQNLRSSLHKPLTGNQQQFVQKTLENVQKNPSQD 74
>U55370-4|AAK82906.1| 179|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 10,
isoform b protein.
Length = 179
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 162 YMKFERSVRSVGETLHRILHGNDNKHEQDDNSSKAKHPAAE 284
Y E SV+++ +LH+ L GN + Q + K+P+ +
Sbjct: 37 YSTLEPSVQNLRSSLHKPLTGNQQQFVQKTLENVQKNPSQD 77
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 147 NLLTDYMKFERSVRSVGETLHRILHGNDNKHEQDDNSSKAKHPAAEIVRK 296
N LTD +R+ + + + + L N+N EQ++N ++ A+ VR+
Sbjct: 322 NQLTD----QRTRNHLDDVMDQYLGRNNNPREQENNEQNIRNTIADHVRR 367
>Z81078-1|CAB03075.3| 441|Caenorhabditis elegans Hypothetical
protein F36H2.2 protein.
Length = 441
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 137 SEDLVMNTEIKIVVIRQNHRIPFYHPNGSQHQNYQIP 27
SE L+ N E + + NH P N Q + +Q+P
Sbjct: 230 SEGLIENEEEVSIEAQANHFPPIDSDNSGQTEEHQLP 266
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -3
Query: 302 DTLSDDLCSRMLGFRTIVVLFMLVVITMENTVERFT 195
D S+ ++LGF I++L + +++ V+RF+
Sbjct: 135 DETSEFWAKKLLGFSLIILLMFMNFFSLKTFVQRFS 170
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 153 EDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPTPELPD 31
++ +R P H ++ S++Q ESS + S++ E PD
Sbjct: 3965 KEQDRSDSPIHSQKEDISQFQNESSPEDVKSEQPHDEEKPD 4005
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 153 EDSERLRGPGHEYRDQNSRYQAESSDSLLPSKRQPTPELPD 31
++ +R P H ++ S++Q ESS + S++ E PD
Sbjct: 3965 KEQDRSDSPIHSQKEDISQFQNESSPEDVKSEQPHDEEKPD 4005
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 252 CRPVHACCHYHGEYGGAFHPRFSLSAQIS-CNQLEDSERLRGPGHEYRDQNSRYQAESSD 76
C+ + H E + +F++S + CN+ + R G EY N Y E +
Sbjct: 1479 CKASESIGHTISEQWNRPNDQFAISQIVKDCNKENEQFTFREAGEEYHTTNCFYTREQEE 1538
Query: 75 SLL 67
++
Sbjct: 1539 KVI 1541
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 252 CRPVHACCHYHGEYGGAFHPRFSLSAQIS-CNQLEDSERLRGPGHEYRDQNSRYQAESSD 76
C+ + H E + +F++S + CN+ + R G EY N Y E +
Sbjct: 6325 CKASESIGHTISEQWNRPNDQFAISQIVKDCNKENEQFTFREAGEEYHTTNCFYTREQEE 6384
Query: 75 SLL 67
++
Sbjct: 6385 KVI 6387
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 60 WMVEGNPMILPDNDYFDLGIHDQVLGVFPNLLTDYMKFERSVRSVGETLHRILHGNDNKH 239
WM G L FD+ I+DQ + +F +++ +R + + L N+NK
Sbjct: 1278 WMTLGTMYRLIKEYGFDMKIYDQQMAMFNDVVKRLEALDR-ISKYSDALCDEKKSNENKE 1336
Query: 240 E 242
E
Sbjct: 1337 E 1337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,449,836
Number of Sequences: 27780
Number of extensions: 143464
Number of successful extensions: 467
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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