Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A01
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical ... 36 0.005
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 30 0.35
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 29 0.62
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 28 1.1
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 28 1.1
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 28 1.1
Z81083-2|CAB03101.3| 646|Caenorhabditis elegans Hypothetical pr... 28 1.4
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 28 1.4
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 28 1.4
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 1.4
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 27 1.9
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 27 1.9
Z81128-3|CAB03401.1| 410|Caenorhabditis elegans Hypothetical pr... 27 2.5
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 27 2.5
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 27 2.5
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 27 2.5
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 27 3.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 27 3.3
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 27 3.3
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 26 4.4
AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical... 26 4.4
U40415-1|AAK39255.4| 445|Caenorhabditis elegans Hypothetical pr... 26 5.8
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 26 5.8
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 25 7.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 7.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 7.6
AL032623-5|CAA21512.1| 533|Caenorhabditis elegans Hypothetical ... 25 7.6
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 25 7.6
>AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical
protein M01B12.5a protein.
Length = 506
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 161 MENKGRNFRTLHCSRDESPNSKKARKKSVKEDKADRRTNKTKKHVK 298
++ K R +R+E+ +K RK +VKE+K ++R K KH+K
Sbjct: 452 IQEKERKIAMHTRNREETAEERKERKAAVKEEKREQRKEKIPKHLK 497
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 203 RDESPNSKKARKKSVKEDKADRRTNKTKKHVK 298
+DE KK K K+DK D++ K KK K
Sbjct: 213 KDEKKKDKKKEDKKDKKDKKDKKDKKDKKEKK 244
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 29.1 bits (62), Expect = 0.62
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 206 DESPNSKKARKKSVKEDKADRRT 274
+E P++ ++RK S+K DK +RR+
Sbjct: 267 EEVPSTSRSRKNSIKSDKIERRS 289
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 191 LHCSRDESPNSKKARKKSVKEDKADRRTNKTKK 289
L C++ + SKK RKK+ KE+ D + K KK
Sbjct: 42 LECAKKKKKESKK-RKKTQKEEDCDSESIKQKK 73
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 158 VMENKGRNFRTLHCSRDESPNSKKARKKSVKE 253
++EN RN +++ SR S N K +KSV+E
Sbjct: 273 LVENHARNLKSVPISRTASRNLMKISRKSVEE 304
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 158 VMENKGRNFRTLHCSRDESPNSKKARKKSVKE 253
++EN RN +++ SR S N K +KSV+E
Sbjct: 273 LVENHARNLKSVPISRTASRNLMKISRKSVEE 304
>Z81083-2|CAB03101.3| 646|Caenorhabditis elegans Hypothetical
protein F44F1.3 protein.
Length = 646
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 269 FCRLYLL*HSSFWLSYYS--VIRHVNNEEFGNFD 174
FC +Y+ H S W +YY+ V+++ ++ F D
Sbjct: 343 FCSIYVCRHRSNWFAYYAKLVLKYPEDDAFPAID 376
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 170 KGRNFRTLHCSRDESPNSKKARKKSVKEDKA 262
K +NF S DE+ NS+K RK+ E ++
Sbjct: 632 KKKNFNMSESSDDETSNSRKRRKRESSESQS 662
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 170 KGRNFRTLHCSRDESPNSKKARKKSVKEDKA 262
K +NF S DE+ NS+K RK+ E ++
Sbjct: 632 KKKNFNMSESSDDETSNSRKRRKRESSESQS 662
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 209 ESPNSKKARKKSVKEDKADRRTNKTKK 289
+S SKK +KK KE K ++ NK K+
Sbjct: 298 KSKKSKKDKKKEKKEKKKSKKANKEKE 324
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +2
Query: 206 DESPNSKKARKKSVKEDKAD--RRTNKTKK 289
D+ SKK KK +KE+K + ++ NK KK
Sbjct: 114 DKKDGSKKLSKKKLKEEKKEKSKKVNKEKK 143
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 209 ESPNSKKARKKSVKEDKADRRTNKTKKHVK 298
E PN+ K K S + + + TN+T+++VK
Sbjct: 642 EDPNTTKKHKVSPSDKRPVKTTNQTERYVK 671
>Z81128-3|CAB03401.1| 410|Caenorhabditis elegans Hypothetical
protein T23D8.3 protein.
Length = 410
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 203 RDESPNSKKARKKSVKEDKADRRTNK 280
++E+P + RKK+VKE + RR K
Sbjct: 358 KNETPEQRSLRKKAVKEARKLRRVEK 383
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 164 ENKGRNFRTLHCSRDESPNSKKARKKSVKEDKADRRTNKTKKH 292
E K RN+ + ES KK + K +E+K DRR +H
Sbjct: 203 EPKTRNWLMRYSKSPESREEKK-KDKHGREEKRDRRRRSNDRH 244
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 164 ENKGRNFRTLHCSRDESPNSKKARKKSVKEDKADRRTNKTKKH 292
E K RN+ + ES KK + K +E+K DRR +H
Sbjct: 203 EPKTRNWLMRYSKSPESREEKK-KDKHGREEKRDRRRRSNDRH 244
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 164 ENKGRNFRTLHCSRDESPNSKKARKKSVKEDKADRRTNKTKKH 292
E K RN+ + ES KK + K +E+K DRR +H
Sbjct: 203 EPKTRNWLMRYSKSPESREEKK-KDKHGREEKRDRRRRSNDRH 244
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 167 NKGRNFRTLHCSRDESPNSKKARKKSVKEDKADRRTNKTKKH 292
+KGR H R + +S +KK D++ + K KH
Sbjct: 1120 DKGRKEEKSHKHRSDDDDSSPKKKKHRDSDESSEKKKKKHKH 1161
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 206 DESPNSKKARKKSVKEDKADRRTNKTKKHVK 298
DE KK +KK K+DK + K K+ K
Sbjct: 176 DEKDQDKKDKKKQKKKDKKKEKEKKEKEDKK 206
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 206 DESPNSKKARKKSVKEDKADRRTNKTKKHVK 298
DE KK +KK K+DK + K K+ K
Sbjct: 176 DEKDQDKKDKKKQKKKDKKKEKEKKEKEDKK 206
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 209 ESPNSKKARKKSVKEDKADRRTN--KTKKHVK 298
ES SKK +KK K+ K +++N K KK+ K
Sbjct: 211 ESKKSKKIKKKKNKKSKDKKKSNSRKNKKNKK 242
>AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical
protein C05C8.8 protein.
Length = 387
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 125 ADQ*TVLMITQVMENKGRNFRTLHCSRDESPNS 223
+DQ +++ +Q ++NK R C+RDE P S
Sbjct: 102 SDQISIVTTSQNIDNKKVTCRYYDCNRDEVPYS 134
>U40415-1|AAK39255.4| 445|Caenorhabditis elegans Hypothetical
protein K02G10.3 protein.
Length = 445
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 125 LGRSSSCKISGLVTVPERSSFKPAIFLYIKSSVSPVF 15
+G SS SG+ + E+ S +PA+ LY+ + S +
Sbjct: 111 MGLVSSILASGIAILVEKKSRRPALALYLINLASETY 147
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 167 NKGRNFRTLHCSRDESPNSKKARKKSVKEDKADRRTNKTKK 289
NK + T ++ + +K A+KK + KAD+ KTKK
Sbjct: 30 NKTKTKATKRKAQMKKKWTKTAQKKRKERKKADKAKKKTKK 70
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 25.4 bits (53), Expect = 7.6
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 233 WLSYYSVIRHVNNEEFGNFDP 171
W+ Y ++ ++ N+ F N+DP
Sbjct: 29 WIDYLNLQENLTNDLFANYDP 49
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 206 DESPNSKKARKKSVKEDKADRRTNKTKKHV 295
DE P K +KK+ K D + + ++T K V
Sbjct: 13413 DEKPKKKVLKKKTEKSDSSISQKSETSKTV 13442
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 206 DESPNSKKARKKSVKEDKADRRTNKTKKHV 295
DE P K +KK+ K D + + ++T K V
Sbjct: 13413 DEKPKKKVLKKKTEKSDSSISQKSETSKTV 13442
>AL032623-5|CAA21512.1| 533|Caenorhabditis elegans Hypothetical
protein Y43F8B.4 protein.
Length = 533
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 119 RSSSCKISGLVTVPERSSFKPAIFLYIKSSVSPVFA 12
R KISG T PE+S + A ++ + P FA
Sbjct: 96 RLEQLKISGFTTTPEKSQVRAANGTWLIHTGRPSFA 131
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 203 RDESPNSKKARKKSVKEDKADRRTNK 280
+DE+ +KK +++ K D+A+ +TN+
Sbjct: 409 KDEAEKAKKEKEEKRKRDEANDKTNE 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,256,195
Number of Sequences: 27780
Number of extensions: 108889
Number of successful extensions: 509
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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