Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P21
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   186   1e-47
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   186   1e-47
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   186   1e-47
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   181   3e-46
AY058551-1|AAL13780.1|  806|Drosophila melanogaster LD24714p pro...    31   0.85 
AE014134-539|AAF51161.1|  757|Drosophila melanogaster CG3542-PB,...    31   0.85 
AE014134-538|AAF51160.1|  806|Drosophila melanogaster CG3542-PA,...    31   0.85 

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  186 bits (453), Expect = 1e-47
 Identities = 88/104 (84%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
 Frame = +3

Query: 117 KDIEKPHA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 293
           KDIEKPH  + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT  LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 294 TTRKTPCGEGSKTWDRFPMRIHKRVIDLHSPSEIVKQITSINIE 425
           TTRKTPCGEGSKTWDRF MRIHKR+IDLHSPSEIVK+ITSINIE
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIE 109


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  186 bits (453), Expect = 1e-47
 Identities = 88/104 (84%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
 Frame = +3

Query: 117 KDIEKPHA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 293
           KDIEKPH  + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT  LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 294 TTRKTPCGEGSKTWDRFPMRIHKRVIDLHSPSEIVKQITSINIE 425
           TTRKTPCGEGSKTWDRF MRIHKR+IDLHSPSEIVK+ITSINIE
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIE 109


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  186 bits (453), Expect = 1e-47
 Identities = 88/104 (84%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
 Frame = +3

Query: 117 KDIEKPHA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 293
           KDIEKPH  + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT  LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 294 TTRKTPCGEGSKTWDRFPMRIHKRVIDLHSPSEIVKQITSINIE 425
           TTRKTPCGEGSKTWDRF MRIHKR+IDLHSPSEIVK+ITSINIE
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIE 109


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  181 bits (441), Expect = 3e-46
 Identities = 86/104 (82%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
 Frame = +3

Query: 117 KDIEKPHA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 293
           KDIEKPH  + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPT  LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 294 TTRKTPCGEGSKTWDRFPMRIHKRVIDLHSPSEIVKQITSINIE 425
           TTRKTPCGEGSKTWDRF MRIHKR+IDLHSPSEIVK+ITSINIE
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIE 109


>AY058551-1|AAL13780.1|  806|Drosophila melanogaster LD24714p
           protein.
          Length = 806

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 27  SGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPHAEISPIHRIRITLTSRNVRSLEK 206
           S  A S+    S  S+   ++      VS  DIE  H E+    R R    S ++ S+  
Sbjct: 634 SEDACSHHHSRSRKSKKNKKHKKRVRSVSRSDIENEHIEVEKSKRRRSKTRSHSLTSIGS 693

Query: 207 VCSD-LINGAKKQKLRVKG 260
           + S+ L+   KK+K +++G
Sbjct: 694 IESEKLLKKKKKRKNKLRG 712


>AE014134-539|AAF51161.1|  757|Drosophila melanogaster CG3542-PB,
           isoform B protein.
          Length = 757

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 27  SGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPHAEISPIHRIRITLTSRNVRSLEK 206
           S  A S+    S  S+   ++      VS  DIE  H E+    R R    S ++ S+  
Sbjct: 585 SEDACSHHHSRSRKSKKNKKHKKRVRSVSRSDIENEHIEVEKSKRRRSKTRSHSLTSIGS 644

Query: 207 VCSD-LINGAKKQKLRVKG 260
           + S+ L+   KK+K +++G
Sbjct: 645 IESEKLLKKKKKRKNKLRG 663


>AE014134-538|AAF51160.1|  806|Drosophila melanogaster CG3542-PA,
           isoform A protein.
          Length = 806

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 27  SGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPHAEISPIHRIRITLTSRNVRSLEK 206
           S  A S+    S  S+   ++      VS  DIE  H E+    R R    S ++ S+  
Sbjct: 634 SEDACSHHHSRSRKSKKNKKHKKRVRSVSRSDIENEHIEVEKSKRRRSKTRSHSLTSIGS 693

Query: 207 VCSD-LINGAKKQKLRVKG 260
           + S+ L+   KK+K +++G
Sbjct: 694 IESEKLLKKKKKRKNKLRG 712


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,564,811
Number of Sequences: 53049
Number of extensions: 451591
Number of successful extensions: 1163
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)