Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P14
(321 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 50 3e-07
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 50 5e-07
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 49 9e-07
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 48 2e-06
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 46 9e-06
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 44 2e-05
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 44 4e-05
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 42 1e-04
04_04_0598 - 26514226-26514545,26516080-26516302 41 2e-04
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 39 8e-04
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 39 8e-04
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 36 0.007
04_04_1575 + 34548774-34549109,34549979-34550185 36 0.009
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 34 0.029
07_03_1550 + 27641099-27641288,27641433-27641646,27641738-276418... 33 0.038
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 33 0.038
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 33 0.066
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 32 0.087
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 32 0.087
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367... 32 0.087
04_04_0782 + 28038292-28038413,28038577-28038778,28039221-280392... 31 0.15
12_02_0670 - 21700523-21700932,21701266-21701390,21701476-217016... 31 0.20
03_06_0089 - 31565454-31565517,31565594-31565618,31565743-315659... 31 0.20
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 31 0.27
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 31 0.27
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 30 0.35
03_01_0225 + 1784211-1784324,1784398-1784668,1784992-1785248,178... 30 0.47
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 30 0.47
07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 29 0.81
11_03_0099 - 9983044-9983052,9983145-9983939,9984031-9984301,998... 29 1.1
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 29 1.1
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 29 1.1
09_06_0265 + 21933913-21933993,21934108-21934404 28 1.4
07_03_0670 + 20562188-20562923,20564288-20564826,20564967-205654... 28 1.4
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 28 1.4
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 28 1.4
06_03_0730 - 23948801-23949079,23949528-23949588,23949828-239499... 28 1.9
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 28 1.9
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 28 1.9
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789... 28 1.9
12_02_1277 + 27497773-27500241 27 2.5
06_03_1277 + 28918140-28918279,28919552-28919761,28920179-289203... 27 3.3
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 27 3.3
03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814... 27 3.3
03_06_0144 - 31969609-31969866,31969961-31970371,31970472-319705... 27 3.3
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 27 3.3
01_07_0141 - 41390483-41391448 27 3.3
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 27 3.3
12_01_0883 + 8507425-8507512,8507749-8507786,8507973-8508698,850... 27 4.3
07_03_0956 - 22869166-22871145,22871800-22871959,22872311-228723... 27 4.3
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 27 4.3
06_03_1048 + 27146475-27146652,27146739-27146804,27146880-271469... 27 4.3
06_02_0226 + 13269065-13269153,13269941-13270057,13270148-13270178 27 4.3
11_04_0330 - 16446685-16446776,16446968-16447119,16447172-164472... 26 5.7
08_01_0846 - 8294616-8294828,8294938-8295019,8295661-8295803 26 5.7
01_01_0458 + 3396508-3396636,3396752-3396807,3397451-3397565,339... 26 5.7
11_01_0610 + 4889158-4889386,4889584-4890297,4890814-4891166,489... 26 7.6
06_01_0082 + 656362-657798 26 7.6
03_05_0961 - 29224548-29225125,29225286-29225308,29225736-292258... 26 7.6
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 50.4 bits (115), Expect = 3e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +3
Query: 18 DDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
D NF+ + + FV F+A WCGHC P A L ++P+ V V A K+
Sbjct: 53 DGNFDAAVRAAGLLFVDFYAPWCGHCKRLAPQLDEAAPVLAGLSTPIVVAKVNADKYKKL 112
Query: 198 ADLAGVEILPAFKL 239
GV+ P L
Sbjct: 113 GSKYGVDGFPTLML 126
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 49.6 bits (113), Expect = 5e-07
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +3
Query: 18 DDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
+ FE+ +G D V F+A WCGHC P + +L + K S V + V ++ V
Sbjct: 37 ESTFEKEVGQDRAALVEFYAPWCGHCKKLAPEYEKLGASFKKAKS-VLIAKVDCDEHKSV 95
Query: 198 ADLAGVEILPAFK 236
GV P +
Sbjct: 96 CSKYGVSGYPTIQ 108
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 DNFEQIIGSDAP-TFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
+ F+ ++ + V F+A WCGHC P + +LA+ K + V + + A + +
Sbjct: 156 ETFDSVVLDETKDVLVEFYAPWCGHCKHLAPIYEKLASVYKQ-DEGVVIANLDADKHTAL 214
Query: 198 ADLAGVEILPAFK 236
A+ GV P K
Sbjct: 215 AEKYGVSGFPTLK 227
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 48.8 bits (111), Expect = 9e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +3
Query: 18 DDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
+ +FE +G+ FV F+A WCGHC P A L + P+ V V A K+
Sbjct: 49 ESSFEAALGAIDYLFVDFYAPWCGHCKRLAPELDEAAPVLAGLSEPIIVAKVNADKYRKL 108
Query: 198 ADLAGVEILPAFKL 239
GV+ P L
Sbjct: 109 GSKYGVDGFPTLML 122
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 48.0 bits (109), Expect = 2e-06
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 24 NFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASD--NPKV 197
NF +++G+ V F+A WCGHC P + A L++ + PV + V AS N +
Sbjct: 34 NFTEVVGAHDFIVVEFYAPWCGHCNQLAPEYEAAAAALRSHDPPVVLAKVDASADLNRGL 93
Query: 198 ADLAGVEILPAFKL 239
A GV+ P ++
Sbjct: 94 AGEHGVQGYPTIRI 107
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 21 DNFEQIIGSDAPTFVM-FFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
DN +++ + ++ F+A WCGHC P +A +LK+ + V + + + N
Sbjct: 378 DNLREVVFNSGKNVLLEFYAPWCGHCQKLAPILEEVAVSLKD-DEDVVIAKMDGTANDVP 436
Query: 198 ADLAGVEILPA 230
+D A VE P+
Sbjct: 437 SDFA-VEGYPS 446
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 45.6 bits (103), Expect = 9e-06
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 DNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASD--NPK 194
D F++ + V F+A WCGHC P + + A L + P+ + V A+D N
Sbjct: 48 DGFDEAVAKHPFMVVEFYAPWCGHCKKLAPEYEKAAQELSKHDPPIVLAKVDANDEKNKP 107
Query: 195 VADLAGVEILPAFKL 239
+A ++ P K+
Sbjct: 108 LATKYEIQGFPTLKI 122
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 18 DDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPV-KVVAVGASDNPK 194
D+ + + S V F+A WCGHC P ATTLK+ V + A+D P
Sbjct: 392 DNVHDFVFKSGKNVLVEFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPS 451
Query: 195 VADLAGVEIL 224
D+ G L
Sbjct: 452 EFDVQGYPTL 461
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 DNFEQII-GSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
DNF+ I+ + V F+A WCGHC P + +LA+ K + V + + A + +
Sbjct: 127 DNFDSIVLDENKDILVEFYAPWCGHCKHLAPIYEKLASVYKLDDG-VVIANLDADKHKDL 185
Query: 198 ADLAGVEILPAFK 236
A+ GV P K
Sbjct: 186 AEKYGVSGYPTLK 198
Score = 29.5 bits (63), Expect = 0.62
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 84 CGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVEILPAFK 236
CGHC P + +L + K S V + V ++ V GV P +
Sbjct: 30 CGHCKKLAPEYEKLGASFKKAKS-VFIAKVDCDEHKSVCSKYGVSGYPTIQ 79
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 43.6 bits (98), Expect = 4e-05
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 DNFE-QIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
+NF+ +++ S+ V FFA WCGHC P + + A LK V A+ A + ++
Sbjct: 37 NNFKSKVLNSNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLK---GVATVAALDADAHKEL 93
Query: 198 ADLAGVEILPAFKL 239
A G+ P K+
Sbjct: 94 AQEYGIRGFPTIKV 107
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 24 NFEQIIGSDAPTFVM-FFASWCGHCATAKPAFSRLATTLK 140
NF++++ +++ FFA WCGHC P + + A LK
Sbjct: 174 NFDKLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKAAKNLK 213
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 36 IIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGV 215
++ S+ P V F+ASWCG C P +L+ K + + +NP +A G+
Sbjct: 120 VVESELPVLVEFWASWCGPCKMIDPVIGKLS---KEYEGKLNCYKLNTDENPDIATQFGI 176
Query: 216 EILPAFKL 239
+P +
Sbjct: 177 RSIPTMMI 184
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 36 IIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGV 215
++ S+ P V ++A+WCG C P +L+ K +K + +NP +A GV
Sbjct: 87 VMESELPVLVGYWATWCGPCKMIDPVVGKLS---KEYEGKLKCYKLNTDENPDIASQYGV 143
Query: 216 EILPAFKL 239
+P +
Sbjct: 144 RSIPTMMI 151
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 39.1 bits (87), Expect = 8e-04
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +3
Query: 18 DDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKV 197
+DN + + +A ++ +A WC A P F+ A L+ S V + PK
Sbjct: 75 NDNARRAVEENAEVLLLGYAPWCERSAQLMPRFAEAAAALRAMGSAVAFAKLDGERYPKA 134
Query: 198 ADLAGVEILPAFKL 239
A GV+ P L
Sbjct: 135 ASAVGVKGFPTVLL 148
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 39.1 bits (87), Expect = 8e-04
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +3
Query: 24 NFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVAD 203
NF + S V F+A WC HC P ++ A L V + V A+++ +A
Sbjct: 82 NFSDFLASHRHVMVEFYAPWCAHCQALAPDYAAAAADLSPLAHQVALAKVDATEDTDLAQ 141
Query: 204 LAGVEILP 227
V+ P
Sbjct: 142 KYDVQGFP 149
Score = 33.1 bits (72), Expect = 0.050
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 72 FASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVG-ASDNPK 194
+A WCGHC +P +++L L+ +S V G A+++P+
Sbjct: 454 YAPWCGHCQELEPTYNKLGKHLRGIDSLVIAKMDGTANEHPR 495
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 35.9 bits (79), Expect = 0.007
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 DNFEQIIGSDAPTFVMF--FASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPK 194
D F I+ S P V+ + WCG C P F ++ + V + DN
Sbjct: 88 DTFWPIVKSAGPKVVVLDMYTQWCGPCKVMAPKFQEMS---EKDQDVVFLKLDCNQDNKS 144
Query: 195 VADLAGVEILPAFKL 239
+A G++++P FK+
Sbjct: 145 LAKELGIKVVPTFKI 159
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 35.5 bits (78), Expect = 0.009
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 RLAFDDNFE-QIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGAS 182
R FE +++ SD P V F A WCG C P A + +K+V +
Sbjct: 70 RFIGQSEFEAEVLQSDLPVLVDFVADWCGPCRLIAPVVDWAA---EEYEGRLKIVKIDHD 126
Query: 183 DNPKVADLAGVEILPAFKL 239
NP++ + V LP+ L
Sbjct: 127 ANPQLIEEYKVYGLPSLIL 145
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 33.9 bits (74), Expect = 0.029
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 48 DAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVEILP 227
D P + F+ASWCG C +A + +K + D P+VA +E +P
Sbjct: 33 DIPVLIEFWASWCGPCRMVHRIVDEIA---QEYAGRIKCYKLDTDDYPQVATSYSIERIP 89
Query: 228 AFKL 239
L
Sbjct: 90 TVLL 93
>07_03_1550 +
27641099-27641288,27641433-27641646,27641738-27641843,
27642213-27642257,27642275-27642540,27642980-27642991,
27643201-27643480,27643716-27643823,27644276-27644362,
27644448-27644552,27644995-27645125,27645249-27645309
Length = 534
Score = 33.5 bits (73), Expect = 0.038
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 63 VMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGV 215
V++ + CG C T KP S++ + N V V + ++P++A+ AG+
Sbjct: 452 VLYTSPTCGPCRTLKPILSKV---IDEYNEHVHFVEIDIEEDPEIAEAAGI 499
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 33.5 bits (73), Expect = 0.038
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 24 NFEQIIGSDAPTFVMFFASWCGHCATAKP 110
NF +++ V F+A WCGHC P
Sbjct: 41 NFSEVVAKHPFIVVKFYAPWCGHCKQLAP 69
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 21 DNFEQIIGSDAPTFVM-FFASWCGHCATAKPAFSRLATTLKN 143
DN + I+ + ++ F+A WCGHC +A +L++
Sbjct: 372 DNIDDIVFNSGKNVLLEFYAPWCGHCRKFALILEEIAVSLQD 413
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 32.7 bits (71), Expect = 0.066
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 69 FFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVEILPAFKL 239
F ASWCG C +P F +A + V + V + +VA VE +P F L
Sbjct: 50 FSASWCGPCKMMEPVFKEMAGRF----TDVAFLKVDVDELAEVARTWRVEAMPTFVL 102
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 32.3 bits (70), Expect = 0.087
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 69 FFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVEILPAF 233
F ASWCG C P F+ LA K+ N+ + V + +A+ VE +P F
Sbjct: 41 FTASWCGPCRIIAPVFADLAK--KHTNA--VFLKVDVDELKPIAEQFSVEAMPTF 91
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 32.3 bits (70), Expect = 0.087
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 48 DAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVEILP 227
D V F+ +WCG C P R A N + + V +N + V++LP
Sbjct: 107 DRLVIVEFYGTWCGSCRALFPRLCRTAVE----NPDILFLKVNFDENKPMCKRLNVKVLP 162
Query: 228 AF 233
F
Sbjct: 163 YF 164
>03_01_0480 -
3676529-3676687,3676767-3676931,3677044-3677220,
3678170-3678273,3678700-3678843,3679831-3679898,
3680059-3680162,3680759-3680767,3681572-3681657,
3681918-3683373
Length = 823
Score = 32.3 bits (70), Expect = 0.087
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 21 DNFEQ--IIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSP-VKVVAVGASDNP 191
D+F++ ++ SD T V FF+ CG C P +LA G P ++ + V +++
Sbjct: 684 DDFDKQLLLASDKLTVVHFFSPSCGACKALHPKVCQLA-----GMHPELQFLMVNSNEQK 738
Query: 192 KVADLAGVEILPAFK 236
++ V +LP F+
Sbjct: 739 EMCRRLNVHVLPMFR 753
>04_04_0782 +
28038292-28038413,28038577-28038778,28039221-28039246,
28039750-28039969
Length = 189
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 30 EQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKN 143
+ + S +P + + ASWC C+ P F R + KN
Sbjct: 100 DSLKSSKSPAVINYGASWCRVCSQILPPFCRFSNEFKN 137
>12_02_0670 -
21700523-21700932,21701266-21701390,21701476-21701651,
21702937-21703128
Length = 300
Score = 31.1 bits (67), Expect = 0.20
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 30 EQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASD-NPKVADL 206
+++ G + T V+F+ASWC +P F L++ +K +AV ++ P V
Sbjct: 72 KELSGKEECTAVLFYASWCPFSQRMRPVFDDLSSMFPR----IKHLAVEQTNAMPAVLSR 127
Query: 207 AGVEILPA 230
GV P+
Sbjct: 128 YGVRSFPS 135
>03_06_0089 -
31565454-31565517,31565594-31565618,31565743-31565927,
31566302-31566405,31567148-31567366,31567721-31567903
Length = 259
Score = 31.1 bits (67), Expect = 0.20
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 27 FEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADL 206
+E+ + + PT V F+A WC C P ++ K+ + V ++ V + + D
Sbjct: 132 YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFV-MLNVDNTKWEQELDE 190
Query: 207 AGVEILPAF 233
GVE +P F
Sbjct: 191 FGVEGIPHF 199
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = +3
Query: 15 FDDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPK 194
FD + + + F ASWCG C P F+ A + V + +
Sbjct: 17 FDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG----AVFLKVDVDELKE 72
Query: 195 VADLAGVEILPAF 233
VA+ VE +P F
Sbjct: 73 VAEKYNVEAMPTF 85
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 30.7 bits (66), Expect = 0.27
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = +3
Query: 33 QIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAG 212
QI D FV F WC HC + L ++ G +++ V + V
Sbjct: 53 QIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVME-GADEIEIGQVDCGVSKPVCSKVD 111
Query: 213 VEILPAFKL 239
+ P FK+
Sbjct: 112 IHSYPTFKV 120
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 30.3 bits (65), Expect = 0.35
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 54 PTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKV 164
P V F+A+WCG C LA +N VKV
Sbjct: 102 PLIVDFYATWCGPCVLMAQDIEMLAVEYENNALFVKV 138
>03_01_0225 +
1784211-1784324,1784398-1784668,1784992-1785248,
1785338-1785450,1791599-1791746,1791943-1792080,
1792448-1792525
Length = 372
Score = 29.9 bits (64), Expect = 0.47
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 66 MFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVAD---LAGVEILPAF 233
M+ A WC HC K F R AT + + V+ GA K+A AG+E P +
Sbjct: 287 MYGAFWCSHCNEQKQIFGREATKILD---YVECFPNGAGKGKKMAPECAAAGIEGFPTW 342
>01_05_0706 +
24457148-24458031,24458621-24458822,24458896-24459080,
24459170-24459503,24459614-24459818,24460022-24460128,
24460220-24460381
Length = 692
Score = 29.9 bits (64), Expect = 0.47
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 39 IGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVE 218
IGS + V F + C P+ + L + + N + V D+P VA V
Sbjct: 600 IGSPGVSVVYFMSIMNQQCTLITPSVNSLCSECPSLN----FLKVNVEDSPMVAKAENVR 655
Query: 219 ILPAFKL 239
I+P FK+
Sbjct: 656 IVPTFKI 662
>07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609
Length = 475
Score = 29.1 bits (62), Expect = 0.81
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 21 DNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKV 164
+N ++ P V+ +A WC C + ++ LA L VKV
Sbjct: 372 ENLLRLESRAEPWLVVLYAPWCPFCQAMEASYLELAERLGGAGGGVKV 419
>11_03_0099 -
9983044-9983052,9983145-9983939,9984031-9984301,
9984857-9985056
Length = 424
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 213 HRPNLPLWDYPTRQRRPL--SPASYRS 139
H+P++PL Y T+Q P SPA YRS
Sbjct: 90 HQPSIPLNYYATQQAAPWAPSPAEYRS 116
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 15 FDDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLA 128
+D+ E++ + F A WC C A P F+ L+
Sbjct: 633 WDNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFAELS 670
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 88 PHHDAKNMTKVGASDPIICSKLSSNASL 5
PHH+ K ++ G SDP + LSSN S+
Sbjct: 800 PHHNLKTLSITGYSDPNSPTWLSSNLSV 827
>09_06_0265 + 21933913-21933993,21934108-21934404
Length = 125
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 48 DAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVADLAGVEILP 227
D ++F A W +PA ++A+ LK+ + V ++V + + L VE LP
Sbjct: 25 DKLVVLVFMAPWSEPWKLMRPAVEKMASGLKSEEAEVCTISVDRFNT--LGRLLRVEALP 82
Query: 228 AFKL 239
F L
Sbjct: 83 TFVL 86
>07_03_0670 +
20562188-20562923,20564288-20564826,20564967-20565458,
20566803-20567018
Length = 660
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 295 CLLWNGRRCSPRRVYRICHSLNAGKIS 215
CL W G SPRR+ N GK S
Sbjct: 434 CLAWTGAVLSPRRLDHFIDEFNIGKAS 460
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 69 FFASWCGHCATAKPAFSRLA 128
F A+WCG C +PAF +A
Sbjct: 51 FSATWCGPCRFIEPAFKDMA 70
>01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 33 QIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPV 158
Q +G+D P+ ++F A AK A + +++ GN+P+
Sbjct: 1091 QTLGTDRPSQILFLTDVYQEAAAAKTAGLEVIISVRPGNAPL 1132
>06_03_0730 -
23948801-23949079,23949528-23949588,23949828-23949954,
23950449-23950485,23950987-23951061,23951489-23951598,
23952700-23952754,23952833-23952949,23953201-23953355,
23953577-23953634,23954239-23954460
Length = 431
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 247 ICHSLNAGKISTPAKSATLGLSDAPTATTFTGELPFFSVVA 125
IC S NA + P K T LS+ GE+P SV A
Sbjct: 115 ICVSENAMHLMLPCKKETYQLSEGVKLCKKKGEVPLLSVEA 155
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 21 DNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPVKVVAVGASDNPKVA 200
+ I S + V F A+ C P+ L + + V + V ++P VA
Sbjct: 607 EQLRDAIHSPGVSVVYFMATMNQQCQQITPSVDSLCSECPS----VNFLKVNVDESPMVA 662
Query: 201 DLAGVEILPAFKL 239
V I+P+FK+
Sbjct: 663 RAENVRIVPSFKI 675
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 27.9 bits (59), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 69 FFASWCGHCATAKPAFSRLATT 134
F ASWCG C P ++ ++ T
Sbjct: 51 FSASWCGPCRVIAPIYAEMSKT 72
>02_05_0792 -
31777775-31778220,31778506-31778630,31778724-31778911,
31779716-31779892
Length = 311
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 63 VMFFASWCGHCATAKPAFSRLAT 131
V+F+ASWC KP F LA+
Sbjct: 82 VLFYASWCPFSQECKPNFEILAS 104
>12_02_1277 + 27497773-27500241
Length = 822
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 99 TAKPAFSRLATTLKNGNSPVKVVAVGA 179
TA P +RLAT LK + V +AVGA
Sbjct: 148 TASPVLTRLATDLKIAKTAVGRLAVGA 174
>06_03_1277 +
28918140-28918279,28919552-28919761,28920179-28920374,
28920459-28920853,28921024-28921119,28921330-28921402,
28921650-28921935,28923824-28923946,28924123-28924404,
28924513-28924928
Length = 738
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 196 TLGLSDAPTATTFTGELPFFSVVAKRLKAGLAVAQ 92
++G + PTAT T PF + + +KAG+ VAQ
Sbjct: 382 SVGPNSPPTATRTTFLNPFDAALLSAVKAGVFVAQ 416
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 139 FSVVAKRLKAGLAVAQWPHHDAKNMTKVG 53
F ++ LKA A +WPH KN+ +G
Sbjct: 604 FGLLDPALKAWSAGRRWPHKTTKNIKPIG 632
>03_06_0376 +
33479776-33479958,33481055-33481236,33481345-33481469,
33481858-33482057,33482629-33482762,33483095-33483158,
33483764-33484441,33484723-33484839
Length = 560
Score = 27.1 bits (57), Expect = 3.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 63 VMFFASWCGHCATAKPAFSRLAT 131
V+F+A+WC + +P F L+T
Sbjct: 82 VLFYAAWCPFSSKFRPIFEALST 104
>03_06_0144 -
31969609-31969866,31969961-31970371,31970472-31970542,
31970637-31970723,31970816-31971389
Length = 466
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 279 VAGVVRDVSTGFVTV*TLARSLHRPNLPLWDYPTRQRRPLSPA 151
+AG R + FV TL LH LP+ +PTR R L A
Sbjct: 169 IAGARRVLVYEFVPNKTLEFHLHGKGLPVMPWPTRLRIALGSA 211
>03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -3
Query: 223 KISTPAKSATLGLSDAPTATTFTGELPFFSVVAKRLKAGLAVAQWPHHDAKNMTKVGAS 47
++ + KS + S+A A T P ++ + +AG+AVA PH K AS
Sbjct: 1777 QVGSKEKSTHIDPSEAQEAAAPT-PAPAAAIAPSQQEAGVAVASSPHEAQKTAAAAAAS 1834
>01_07_0141 - 41390483-41391448
Length = 321
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 223 KISTPAKSATLGLSDAPTATTFTGEL-PFFSVV 128
K++T AT+G+ P+A FT E PF S V
Sbjct: 132 KVTTSISQATIGVHIPPSAGEFTDEAKPFMSYV 164
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 27.1 bits (57), Expect = 3.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 69 FFASWCGHCATAKPAFSRLATT 134
F A+WCG C P ++ ++ T
Sbjct: 550 FSAAWCGPCRVIAPVYAEMSQT 571
>12_01_0883 +
8507425-8507512,8507749-8507786,8507973-8508698,
8508794-8508913
Length = 323
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 214 TPAKSA--TLGLSDAPTATTFTGE 149
TP A +LGLS AP ATT TGE
Sbjct: 151 TPTSPAGRSLGLSTAPGATTDTGE 174
>07_03_0956 -
22869166-22871145,22871800-22871959,22872311-22872375,
22872464-22872529,22872634-22872691,22872834-22872925,
22873093-22873332
Length = 886
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 300 DHVFYGTVAGVVRDVSTGFVTV*TLARSLHRPNLPLWDYPTRQ 172
+ FY + +D G +T ++ R+++ +PLWD T Q
Sbjct: 245 EDAFYNKAVKLTKDELNGKITQ-SVGRAIYTDPVPLWDSTTGQ 286
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 54 PTFVMFFASWCGHCATAKPAFS 119
PTF +A++C H A A P FS
Sbjct: 1617 PTFCEMYANFCFHLAGALPDFS 1638
>06_03_1048 +
27146475-27146652,27146739-27146804,27146880-27146975,
27147073-27147152,27148165-27148209,27148326-27148420,
27148623-27148632
Length = 189
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 54 PTFVMFFASWCGHCATAKPAFSRLAT 131
P + A WCG C P S+L++
Sbjct: 101 PAVFYYTAVWCGPCRAMAPVISKLSS 126
>06_02_0226 + 13269065-13269153,13269941-13270057,13270148-13270178
Length = 78
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 301 RPCLLWNGRRCSPRRVYRICHSLNAGKISTPAKSATLGLSDAPTATT 161
RPC W RRC P R R GK S+ A+ + PTAT+
Sbjct: 8 RPCRGWWARRCPPIRQIRQEGRRQEGKNSSVV--ASTADATFPTATS 52
>11_04_0330 -
16446685-16446776,16446968-16447119,16447172-16447281,
16447518-16447619,16447705-16447854,16448195-16448350,
16448552-16448713,16449549-16449638,16450152-16450271,
16451323-16451418,16451502-16451638,16453400-16453622
Length = 529
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 3 TRLAFDDNFEQIIGSDAPTFVMFFASWCGHCATAKPAFSRLATTLKNGNSPV 158
TR F+ Q +G D+P ++F AK A + +++ GN+P+
Sbjct: 465 TRSYFE--ISQSLGVDSPAQILFITDVFQEAVAAKSAGFEVIISIRPGNAPL 514
>08_01_0846 - 8294616-8294828,8294938-8295019,8295661-8295803
Length = 145
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 158 ESGRRWRVG*SQSGRFGRCRDLASVQTV 241
ESGRRWR G G GR R + ++ TV
Sbjct: 20 ESGRRWRRGLGLEGDDGRSRRM-TITTV 46
>01_01_0458 +
3396508-3396636,3396752-3396807,3397451-3397565,
3397671-3397787,3397908-3398095,3398198-3398257,
3398365-3398524,3398903-3398971,3399085-3399186
Length = 331
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 71 FRIMVRPLRDGQTGLQPFSYDAKER*LAGESGRRWRVG*SQSGRFGRC 214
+RI +R + D P+ +AKE L G+ +V R+GRC
Sbjct: 217 YRIRLRGI-DAPESAMPYGKEAKEALLKMVQGKSLKVYVYDEDRYGRC 263
>11_01_0610 +
4889158-4889386,4889584-4890297,4890814-4891166,
4891619-4891830,4892633-4892889,4892984-4893162,
4893901-4893948
Length = 663
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 213 HRPNLPLWDYPTRQRRPLSPASYRSLAS 130
HRP LP P+R RRP PA RS A+
Sbjct: 25 HRP-LPHASKPSRIRRPGKPARRRSPAA 51
>06_01_0082 + 656362-657798
Length = 478
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 219 SLHRPNLPLWDYPTRQRRPLSPASYR 142
S HR L L D P Q PLSP++ R
Sbjct: 70 SSHRATLLLPDSPHSQASPLSPSALR 95
>03_05_0961 -
29224548-29225125,29225286-29225308,29225736-29225864,
29226533-29228217
Length = 804
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 310 RKIRPCLLWNGRRCSPRRVYRI 245
R+ PC W G RCS RV +
Sbjct: 63 RRADPCTAWAGVRCSGGRVVSV 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,263,599
Number of Sequences: 37544
Number of extensions: 183476
Number of successful extensions: 621
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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