Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P10
         (270 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   1.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   2.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   4.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   4.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   4.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   8.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 128 ANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAA 244
           +NEDE +  L   VVI  D S E  L    E    R +A
Sbjct: 434 SNEDEDETPLDPVVVISNDKSTEFFLATVVEEAACRFSA 472


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -2

Query: 188 MHLSQ*QHQRIAPVSLHLHSPPLVH 114
           +H +   H   A    H HS PL H
Sbjct: 426 IHATPHHHHSHAATPHHQHSTPLAH 450


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -3

Query: 148 FPFIFIRRPWCTPASYHHA 92
           FP  +I  PW  P +   A
Sbjct: 456 FPTRYIHEPWNAPLNVQRA 474


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 111 LQATTMHNTKHNTRIFSKF 55
           L +T  + +KHNT+ F+++
Sbjct: 380 LGSTETYYSKHNTQQFTQY 398


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 122 LVHPCKLPPCIIPNTI 75
           L +PCK P  I+P  +
Sbjct: 66  LSNPCKHPTIIMPQDV 81


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 158 FSGVVIEKDASGENKLNVKFE 220
           +SG  +  D + ENKLN   E
Sbjct: 205 YSGWYLNHDYNLENKLNYFIE 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,116
Number of Sequences: 438
Number of extensions: 1180
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5138079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)