Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P09
         (307 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    50   4e-09
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    50   4e-09
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    41   3e-06
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    34   3e-04
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    32   0.001
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    29   0.008
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   6.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    20   6.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   8.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    19   8.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    19   8.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    19   8.8  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 50.4 bits (115), Expect = 4e-09
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +2

Query: 11  IECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPC 190
           I+C   F +  +L  HVRT H     F  C +C +RF  + S   H++  HS     + C
Sbjct: 25  IDCNKSFSQAANLTAHVRT-HSGEKPF-RCPVCDRRFSQSSSVTTHMRT-HS-GERPYRC 80

Query: 191 GLCTISFSSNEALTIHLQTKHLAEDEMCECEECNIVF 301
            LC  +FS +  LT HL+  H  E +  EC+ C + F
Sbjct: 81  RLCKKAFSDSSTLTKHLRI-HSGE-KPYECKLCLLRF 115



 Score = 27.9 bits (59), Expect = 0.025
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 17  CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKL 157
           C+  F +  +L KH+R  H     + EC +C  RF  + +   H+++
Sbjct: 83  CKKAFSDSSTLTKHLRI-HSGEKPY-ECKLCLLRFSQSGNLNRHMRV 127



 Score = 24.2 bits (50), Expect = 0.31
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +2

Query: 113 KRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMCECEECN 292
           K +    + K HL+  HS     + C  C  SFS    LT H++T H  E     C  C+
Sbjct: 1   KSYARPSTLKTHLRT-HS-GEKPYRCIDCNKSFSQAANLTAHVRT-HSGEKPF-RCPVCD 56


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 50.4 bits (115), Expect = 4e-09
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +2

Query: 11  IECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPC 190
           I+C   F +  +L  HVRT H     F  C +C +RF  + S   H++  HS     + C
Sbjct: 281 IDCNKSFSQAANLTAHVRT-HSGEKPF-RCPVCDRRFSQSSSVTTHMRT-HS-GERPYRC 336

Query: 191 GLCTISFSSNEALTIHLQTKHLAEDEMCECEECNIVF 301
            LC  +FS +  LT HL+  H  E +  EC+ C + F
Sbjct: 337 RLCKKAFSDSSTLTKHLRI-HSGE-KPYECKLCLLRF 371



 Score = 32.3 bits (70), Expect = 0.001
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = +2

Query: 98  CHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMCE 277
           C IC K +    + K HL+  HS     + C  C  SFS    LT H++T H  E     
Sbjct: 252 CRICGKSYARPSTLKTHLR-THS-GEKPYRCIDCNKSFSQAANLTAHVRT-HSGEKPF-R 307

Query: 278 CEECN 292
           C  C+
Sbjct: 308 CPVCD 312



 Score = 27.9 bits (59), Expect = 0.025
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 17  CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKL 157
           C+  F +  +L KH+R  H     + EC +C  RF  + +   H+++
Sbjct: 339 CKKAFSDSSTLTKHLRI-HSGEKPY-ECKLCLLRFSQSGNLNRHMRV 383


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 41.1 bits (92), Expect = 3e-06
 Identities = 32/95 (33%), Positives = 40/95 (42%)
 Frame = +2

Query: 17  CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGL 196
           C   F  K  L+ H RT H     F EC  CHKRF      K H++ LH+     + C  
Sbjct: 140 CNRSFGYKHVLQNHERT-HTGEKPF-ECQECHKRFTRDHHLKTHMR-LHT-GERPYRCEH 195

Query: 197 CTISFSSNEALTIHLQTKHLAEDEMCECEECNIVF 301
           C   F     L  HL+  H  E     CE C++ F
Sbjct: 196 CDRQFVQVANLRRHLRV-HTGE-RPYGCEHCSMKF 228


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 34.3 bits (75), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +2

Query: 17  CETLFKEKRSLRKHV---RTKHPNSVLFPECHICHKRFESAKSCKIHLKL 157
           C   F  K +L+ H+   R K P  VL  +C +CHK+F +A   + H++L
Sbjct: 168 CGRAFTTKGNLKTHMGVHRAKPPMRVLH-QCPVCHKKFTNALVLQQHIRL 216



 Score = 29.1 bits (62), Expect = 0.011
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 17  CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSF-NMNT-HPC 190
           C  +   K +L+ H RT H     F +C IC + F +  + K H+ +  +   M   H C
Sbjct: 140 CHRVLSCKSALQMHYRT-HTGERPF-KCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQC 197

Query: 191 GLCTISFSSNEALTIHLQ 244
            +C   F++   L  H++
Sbjct: 198 PVCHKKFTNALVLQQHIR 215


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 32.3 bits (70), Expect = 0.001
 Identities = 22/67 (32%), Positives = 29/67 (43%)
 Frame = +2

Query: 95  ECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMC 274
           EC  CHKRF      K H++ LH+     + C  C   F     L  HL+  H  E    
Sbjct: 11  ECQECHKRFTRDHHLKTHMR-LHT-GERPYRCEHCDRQFVQVANLRRHLRV-HTGE-RPY 66

Query: 275 ECEECNI 295
            CE C++
Sbjct: 67  GCEHCSM 73


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 0.008
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +2

Query: 17  CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGL 196
           C   F     L++H+RT H     F  C IC+KRF  +     H+K  H+ N        
Sbjct: 352 CGKRFTRSDELQRHLRT-HTGEKRFA-CPICNKRFMRSDHLAKHVK-THNGNGKKGSSDS 408

Query: 197 CTISFSSNEA 226
           C+ S  ++++
Sbjct: 409 CSDSEENSQS 418


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 188 CGLCTISFSSNEALTIHL 241
           C  C I+F      TIH+
Sbjct: 473 CQYCNIAFGDAVLYTIHM 490


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 78  FGCFVRTCFLKLRFSLNSV 22
           FG FV   F  L+F+L+ +
Sbjct: 76  FGAFVMGLFCILKFALDGL 94


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 248 KHLAEDEMCECEECNIV 298
           K+L EDE      CN++
Sbjct: 55  KYLVEDEETSLATCNML 71


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 195 YAPFHSVRTKLSQFT 239
           Y PF +V   ++QFT
Sbjct: 169 YKPFVNVNAHVAQFT 183


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 195 YAPFHSVRTKLSQFT 239
           Y PF +V   ++QFT
Sbjct: 169 YKPFINVNAHVAQFT 183


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 96  SGNNTEFGCFVR 61
           SGN  E GC++R
Sbjct: 220 SGNMFENGCYLR 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,794
Number of Sequences: 336
Number of extensions: 1556
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)