Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P09
(307 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 36 0.005
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 36 0.005
07_03_1165 - 24459156-24460139 30 0.31
07_03_1095 + 23926977-23927657 30 0.31
01_01_0476 + 3505799-3506479,3506639-3506897,3508427-3508550,350... 29 0.55
04_04_1327 + 32677408-32677460,32677563-32677658,32677737-326778... 29 0.95
11_04_0101 - 13469731-13469898,13470163-13470279,13470528-134707... 28 1.7
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 27 2.2
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 27 2.2
01_06_1614 - 38648495-38649706 27 2.2
12_02_0883 - 23982022-23982825 27 2.9
05_05_0045 + 21830291-21830343,21830446-21830541,21830620-218306... 27 2.9
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 27 2.9
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 27 2.9
10_08_1064 + 22636603-22636785,22636901-22637671,22637749-22638960 27 3.8
04_04_1371 + 32995337-32995358,32995745-32995822,32995876-329960... 27 3.8
01_07_0337 + 42838260-42838344,42838972-42839084,42839652-428397... 27 3.8
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 26 5.1
08_01_1070 + 10932102-10932291,10936686-10936947,10937158-109372... 26 5.1
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 26 5.1
05_07_0110 - 27747789-27747897,27748375-27748568,27748811-277488... 26 5.1
05_01_0058 + 415145-415210,415888-415906,415971-416083,416495-41... 26 5.1
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 26 5.1
09_04_0351 + 16904075-16904738,16906285-16906366,16906533-169066... 26 6.7
09_02_0157 + 5083771-5083996,5084007-5084326,5085958-5086392,508... 26 6.7
02_01_0007 - 48497-48880 26 6.7
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901... 25 8.9
09_06_0357 + 22502660-22502876,22503433-22504577 25 8.9
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 25 8.9
03_05_0255 + 22435027-22435072,22436022-22437085 25 8.9
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHP 187
C+ F +++ L +H + KH F +CH+CHK+ +A IH+ +H ++ P
Sbjct: 16 CDREFDDEKILVQHQKAKH-----F-KCHVCHKKLSTAGGMAIHVLQVHKESVTKVP 66
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Frame = +2
Query: 71 HPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNT----HPCGLCTISFSSNEALTIH 238
HP+ L +C IC + F + +H +H + + C +C SF++ L H
Sbjct: 458 HPSPGL--KCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERH 515
Query: 239 LQTKHLAE----DEMCECEECNIVF 301
+Q KH A+ + C CN F
Sbjct: 516 VQEKHGAQYLQYSTLLRCISCNSNF 540
>07_03_1165 - 24459156-24460139
Length = 327
Score = 30.3 bits (65), Expect = 0.31
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 89 FPECHICHKRFESAKSCKIHLKLLHSFN 172
FP CH+C+K F S K+ H+++ H+ N
Sbjct: 113 FP-CHLCNKEFGSRKAVHGHMRVHHAEN 139
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 185 PCGLCTISFSSNEALTIHLQTKHLAEDE 268
PC LC F S +A+ H++ H AE+E
Sbjct: 114 PCHLCNKEFGSRKAVHGHMRVHH-AENE 140
>07_03_1095 + 23926977-23927657
Length = 226
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +2
Query: 107 CHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMCECEE 286
CH+ + L + + H C +C + F S +AL H++ ++ E +E
Sbjct: 118 CHRNLFAQVVAGDELSSDRTMVVKGHKCSICRLEFPSGQALGGHMRVHYVGGVEGGSVKE 177
Query: 287 CNIV 298
N+V
Sbjct: 178 KNVV 181
>01_01_0476 +
3505799-3506479,3506639-3506897,3508427-3508550,
3508922-3509030
Length = 390
Score = 29.5 bits (63), Expect = 0.55
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 149 LKLLHSFNMNTHPCGLCTISFSSNEAL 229
LKLLH ++P GLC +S SN ++
Sbjct: 135 LKLLHQIETQSNPKGLCCLSHHSNTSV 161
>04_04_1327 +
32677408-32677460,32677563-32677658,32677737-32677811,
32678446-32678520,32678615-32678837,32678931-32679174,
32679740-32680197,32680276-32680470,32680660-32681361
Length = 706
Score = 28.7 bits (61), Expect = 0.95
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 8 GIECETLFKEKRSLRKHVRT-KHPNSVLFPE--CHICHKRFESAKSC 139
GIE + E S+ K + H + V FP CH CH+ ++++C
Sbjct: 650 GIEKKNTTNECESVEKENQVIDHEDEVPFPRRFCHTCHEAGHNSRTC 696
>11_04_0101 -
13469731-13469898,13470163-13470279,13470528-13470702,
13472702-13472804,13472847-13472971,13473252-13473457
Length = 297
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 183 CVFILN-ECSSFKWILQDFADSNLLWHI*HSGNNT 82
C++ L+ + W+L++F S L++HI +GN T
Sbjct: 91 CIYKLHRDYGKCVWVLENFLASLLVFHIQQTGNGT 125
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 140 KIHLKLLHS-FNMNTHPCGLCTISFSSNEALTIH 238
K H ++ + F+ +H C C + FS E L++H
Sbjct: 879 KYHAHVISTLFDDQSHQCNTCGLRFSLEEELSVH 912
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 98 CHICHKRFESAKSCKIHLKLL-HSFNMNTHPCGLCTISFSSNEALTIHL 241
C +C +F + HLK++ H N+ + + +++E+L++ L
Sbjct: 220 CRVCQAKFTCQSDLQSHLKVMKHQLNLRAPSSDGSSFTSATSESLSLEL 268
>01_06_1614 - 38648495-38649706
Length = 403
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 83 VLFPECHICHKRFESAKSCKIHLKL 157
V FP CH+C K F S K+ H+++
Sbjct: 103 VAFP-CHVCSKEFGSRKAVHGHMRV 126
>12_02_0883 - 23982022-23982825
Length = 267
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 95 ECHICHKRFESAKSCKIH 148
+C CHK FE SC H
Sbjct: 11 QCSFCHKDFEGRSSCAEH 28
>05_05_0045 +
21830291-21830343,21830446-21830541,21830620-21830694,
21831329-21831403,21831497-21831719,21831813-21832056,
21832621-21832769,21832913-21832944,21832991-21833078,
21833157-21833438,21833542-21834243
Length = 672
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 8 GIECETLFKEKRSLRKHVRT-KHPNSVLFPE--CHICHKRFESAKSC 139
GIE + E S+ + + H + V FP CH CH+ ++++C
Sbjct: 616 GIEKKNTTNECESVEEENQVIDHEDEVPFPRRFCHTCHEAGHNSRTC 662
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 8 GIECETLFKEKRSLRKHVRT-KHPNSVLFPE--CHICHKRFESAKSC 139
GIE + E S+ + + H + V FP CH CH+ ++++C
Sbjct: 679 GIEKKNTTNECESVEEENQVIDHEDEVPFPRRFCHTCHEAGHNSRTC 725
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 8 GIECETLFKEKRSLRKHVRT-KHPNSVLFPE--CHICHKRFESAKSC 139
GIE + E S+ + + H + V FP CH CH+ ++++C
Sbjct: 677 GIEKKNTTNECESVEEENQVIDHDDEVPFPRRFCHTCHEAGHNSRTC 723
>10_08_1064 + 22636603-22636785,22636901-22637671,22637749-22638960
Length = 721
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 161 AVVSNGSYKISPIRIFCGIYDIRETTLNSGAS 66
AV S GS ++ + C YDI T LN GAS
Sbjct: 399 AVTSAGSAELVAVSSLC-TYDIYRTYLNPGAS 429
>04_04_1371 +
32995337-32995358,32995745-32995822,32995876-32996019,
32997595-32997930,32998014-32998166,32998286-32998501,
32998600-33000695
Length = 1014
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 180 VFILNECSSFKWILQDFADSNLLWHI*HSGNNTEFGCFV--RTCFLKLRFSLNSVSHSMP 7
V +L EC+ K + D+ + +S +T GCFV RT + + SL + ++P
Sbjct: 55 VKLLAECTKTKLLPGAVTDATCELRLDYSNISTSHGCFVEERTALMDIGSSLTRSNGTVP 114
>01_07_0337 +
42838260-42838344,42838972-42839084,42839652-42839729,
42839831-42840054,42840084-42840128,42840156-42840264
Length = 217
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 89 FPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHL 256
FP C C+ E C HL+ H F+ C LC + + +Q HL
Sbjct: 37 FP-CPFCYIEVEVPFICN-HLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHL 90
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPC 190
C+ F+ ++ L +H +H N V C + + ++H LL F + H C
Sbjct: 965 CKKAFRAEKFLDQHFHNRHNNLVDNSLADSCFPINQGQSASRLHEFLLRQF-CDAHTC 1021
>08_01_1070 +
10932102-10932291,10936686-10936947,10937158-10937292,
10937468-10938791
Length = 636
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 143 SYKISPIRIFCGIYDIRETTLNSGASYAR 57
+Y +P+ FC Y + T +N A+Y +
Sbjct: 365 AYVAAPVFAFCNAYGVGVTDMNLSATYGK 393
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 188 CGLCTISFSSNEALTIHLQTKHLAEDEMCECEECNIVFKG 307
C LC +S +S AL HL+ K + ++ C N + G
Sbjct: 255 CALCQVSATSEGALNEHLEGKR-HKAKLAHCGASNAIKDG 293
>05_07_0110 -
27747789-27747897,27748375-27748568,27748811-27748888,
27749925-27750064,27750197-27750269
Length = 197
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 98 CHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKH 253
C C++ + C HL+ H F + PC +C+ + + + H+ +H
Sbjct: 44 CPYCYEDHDVVSLCA-HLEEEHPFEPHAAPCPICSDKIAKD--MLNHITVQH 92
>05_01_0058 +
415145-415210,415888-415906,415971-416083,416495-416572,
416731-416975,417083-417188
Length = 208
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/64 (23%), Positives = 23/64 (35%)
Frame = +2
Query: 98 CHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMCE 277
C C+ E C HL+ H F+M C +C + + +Q HL +
Sbjct: 39 CPFCYIEVEVHFLCD-HLQEEHCFDMKNAVCPICADNLDKDTDEHFRVQHSHLLKRRKSS 97
Query: 278 CEEC 289
C
Sbjct: 98 SFSC 101
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +2
Query: 2 HEGIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNT 181
HEG F +L+ H++T ++ + C +RF + H+K H
Sbjct: 106 HEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEKGGLQ 165
Query: 182 HPCGLCT 202
+P G T
Sbjct: 166 NPGGSAT 172
>09_04_0351 +
16904075-16904738,16906285-16906366,16906533-16906697,
16906811-16906929,16906930-16907156
Length = 418
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -3
Query: 200 CINHKDAYSY*MNAVVSNGSYKISPIRIFCGIYDIRETTLNS 75
C + A++ V+NG+Y ++ R+FC + ++T +S
Sbjct: 223 CTSSFPAFTADYGLAVANGTYAVTANRLFCVPAPLADSTCSS 264
>09_02_0157 +
5083771-5083996,5084007-5084326,5085958-5086392,
5087277-5087921
Length = 541
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 80 SVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSN 220
S+ FPE + K + CK +LL +F + + GL T +S+
Sbjct: 86 SMFFPEVYRRMKGTSVSNYCKFDSELLTAFTSSLYIAGLLTTFLASS 132
>02_01_0007 - 48497-48880
Length = 127
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 155 LLHSFNMNTHPCGLCTISFSSNEALTIHL 241
+L + ++PCG C F S +AL H+
Sbjct: 20 ILQAKKARSYPCGFCRREFRSAQALGGHM 48
>10_08_0132 + 15087274-15087797,15089544-15089732,15090048-15090186,
15090454-15090594,15091420-15091569,15091908-15092011,
15092258-15092432,15092714-15092823,15092906-15093073,
15093180-15093345,15093771-15094049,15094445-15094543,
15094619-15094676,15095145-15095336,15095693-15095724,
15096023-15096117,15096321-15096426
Length = 908
Score = 25.4 bits (53), Expect = 8.9
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -2
Query: 258 AKCFVWR*IV--RASFELNEMVHKPQGCVFILNECSSFKWILQDFADSNLLWHI*HSGNN 85
+K F WR + +A+F P + + CSS KW L S + +I H
Sbjct: 830 SKVFCWRPLTSDQAAFS-GSFKMLPASSIVLSLHCSSGKWSLAVPISSMVKLYIHHGFVM 888
Query: 84 TEFGCFVRTCFLKLRFSLNS 25
E+ R+ + + LNS
Sbjct: 889 AEWLTHARSSYAETGIGLNS 908
>09_06_0357 + 22502660-22502876,22503433-22504577
Length = 453
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 176 NTHPCGLCTISFSSNEALTIHLQT-KHLAEDE 268
+ H C +C + FS+ ALT+ L + +H E E
Sbjct: 26 HVHECAVCGVEFSTITALTVILWSGEHEEERE 57
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 90 NNTEFGCFVRTCFLKLRF 37
NN + C++ TCFL L F
Sbjct: 88 NNLPYSCWLGTCFLGLTF 105
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 95 ECHICHKRFESAKSCKIHLK 154
EC +C K F S + +H+K
Sbjct: 107 ECQLCFKAFHSCDALSMHMK 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,137,139
Number of Sequences: 37544
Number of extensions: 150040
Number of successful extensions: 442
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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