Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P09
(307 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 41 3e-06
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 34 3e-04
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 33 6e-04
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 32 0.001
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 32 0.001
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 31 0.003
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 30 0.006
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 22 2.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 2.6
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 21 3.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 4.5
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 21 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 4.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 6.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 6.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 7.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 7.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 7.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 7.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 7.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 7.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 7.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 7.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 20 7.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 41.1 bits (92), Expect = 3e-06
Identities = 29/100 (29%), Positives = 44/100 (44%)
Frame = +2
Query: 2 HEGIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNT 181
H+ C F + L H+RT H + C C K F +K K+H + H+
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRT-HTGEKPYV-CKACGKGFTCSKQLKVHTR-THT-GEKP 231
Query: 182 HPCGLCTISFSSNEALTIHLQTKHLAEDEMCECEECNIVF 301
+ C +C SF N L +H Q H E ++ +C C+ F
Sbjct: 232 YTCDICGKSFGYNHVLKLH-QVAHYGE-KVYKCTLCHETF 269
Score = 38.3 bits (85), Expect = 2e-05
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGL 196
C F K +L H R H + +C +C + FE + H+++ H+ H C +
Sbjct: 125 CSKSFSVKENLSVHRRI-HTKERPY-KCDVCERAFEHSGKLHRHMRI-HT-GERPHKCTV 180
Query: 197 CTISFSSNEALTIHLQTKHLAEDEMCECEEC 289
C+ +F + L IH++T H E C+ C
Sbjct: 181 CSKTFIQSGQLVIHMRT-HTGEKPYV-CKAC 209
Score = 36.3 bits (80), Expect = 8e-05
Identities = 23/96 (23%), Positives = 41/96 (42%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGL 196
C+ F +K + H+R+ C+IC K F H + H+ + C
Sbjct: 67 CQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRT-HT-GEKPYQCEY 124
Query: 197 CTISFSSNEALTIHLQTKHLAEDEMCECEECNIVFK 304
C+ SFS E L++H + ++ +C+ C F+
Sbjct: 125 CSKSFSVKENLSVHRRIH--TKERPYKCDVCERAFE 158
Score = 34.3 bits (75), Expect = 3e-04
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 95 ECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMC 274
+C +C K F+ + HL+ + + C +C +F+ LT H +T H E +
Sbjct: 63 QCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRT-HTGE-KPY 120
Query: 275 ECEECNIVF 301
+CE C+ F
Sbjct: 121 QCEYCSKSF 129
Score = 27.5 bits (58), Expect = 0.039
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLK 154
C F L+ H + H ++ +C +CH+ F S K+ ++H+K
Sbjct: 237 CGKSFGYNHVLKLH-QVAHYGEKVY-KCTLCHETFGSKKTMELHIK 280
Score = 23.0 bits (47), Expect = 0.84
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +2
Query: 158 LHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMCECEECNIVF 301
L + T+ C LC +F HL++ ++ C C F
Sbjct: 54 LTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTF 101
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 34.3 bits (75), Expect = 3e-04
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLH 163
C F SL++H + KH S C C++R+ + S H L H
Sbjct: 11 CRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 31.5 bits (68), Expect = 0.002
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 188 CGLCTISFSSNEALTIHLQTKHLAEDEMCECEECN 292
C C +FS +L H Q KH D + CE CN
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCN 42
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 33.5 bits (73), Expect = 6e-04
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLH 163
C + LR+H++ H P C+IC + + S S + H + H
Sbjct: 8 CNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 32.3 bits (70), Expect = 0.001
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 98 CHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMCE 277
C C K + S + K+H++ H+ H CG +FS L H++T H E
Sbjct: 19 CKYCEKVYVSLGALKMHIR-THTLPCKCHLCGK---AFSRPWLLQGHIRT-HTGEKPF-S 72
Query: 278 CEECNIVF 301
C+ CN F
Sbjct: 73 CQHCNRAF 80
Score = 26.2 bits (55), Expect = 0.091
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLK 154
CE ++ +L+ H+RT L +CH+C K F + H++
Sbjct: 22 CEKVYVSLGALKMHIRT----HTLPCKCHLCGKAFSRPWLLQGHIR 63
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 32.3 bits (70), Expect = 0.001
Identities = 23/65 (35%), Positives = 27/65 (41%)
Frame = +2
Query: 95 ECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEMC 274
EC CHKRF K H++ LH+ H C C F L HL+ H E
Sbjct: 11 ECPECHKRFTRDHHLKTHMR-LHTGEKPYH-CSHCDRQFVQVANLRRHLRV-HTGERPYA 67
Query: 275 ECEEC 289
CE C
Sbjct: 68 -CELC 71
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 31.1 bits (67), Expect = 0.003
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLH 163
C K +L++H +H + C +CHK F + S H + H
Sbjct: 377 CGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYH 425
Score = 29.1 bits (62), Expect = 0.013
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 98 CHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKH 253
C +C K + + K H + H +N+ C LC F + +L H H
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYH 425
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 30.3 bits (65), Expect = 0.006
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLH 163
C + K SL++HV KH C IC + + S S H+ H
Sbjct: 11 CGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.8 bits (44), Expect = 2.0
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 135 DFADSNLLWHI*HSGNNTEFGCFVRTCFLKLRF 37
D +D ++ +FGCF F KL F
Sbjct: 33 DLSDLKSMYEANSEEQMKKFGCFEACVFQKLHF 65
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 2.6
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +2
Query: 17 CETLFKEKRSLRKHVRTKH 73
CE + ++ ++ KH+ T+H
Sbjct: 288 CEVICEDYQAFLKHLNTEH 306
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/23 (30%), Positives = 11/23 (47%)
Frame = +2
Query: 197 CTISFSSNEALTIHLQTKHLAED 265
C + +A HL T+H +D
Sbjct: 288 CEVICEDYQAFLKHLNTEHTLDD 310
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.0 bits (42), Expect = 3.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 168 NECSSFKWILQDFADSNLL 112
N C +LQ F D+NL+
Sbjct: 110 NSCKKSSKLLQCFIDNNLM 128
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 4.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 217 ERSSHNSPPDETFG 258
+RS HN+ P TFG
Sbjct: 583 KRSIHNNYPVHTFG 596
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/25 (28%), Positives = 10/25 (40%)
Frame = +2
Query: 185 PCGLCTISFSSNEALTIHLQTKHLA 259
PC C + +T+ T H A
Sbjct: 19 PCDGCAAPYGYKNIMTLSQDTSHFA 43
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 4.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 99 HSGNNTEFGCFVRT 58
H G N EF C V T
Sbjct: 343 HLGGNAEFRCEVST 356
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 4.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 99 HSGNNTEFGCFVRT 58
H G N EF C V T
Sbjct: 343 HLGGNAEFRCEVST 356
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 6.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +2
Query: 71 HPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTK 250
HP++ E H+ KRF S + K L S G C I L +H + +
Sbjct: 393 HPSTQEDSEEHLTPKRFHSRAASKEDLS-PSSLADGARFGGSCLIHGPPLPPLPLHTECE 451
Query: 251 HLAEDEMCECEE 286
L+ EE
Sbjct: 452 DLSVSGEAGIEE 463
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 6.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +2
Query: 71 HPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTK 250
HP++ E H+ KRF S + K L S G C I L +H + +
Sbjct: 393 HPSTQEDSEEHLTPKRFHSRAASKEDLS-PSSLADGARFGGSCLIHGPPLPPLPLHTECE 451
Query: 251 HLAEDEMCECEE 286
L+ EE
Sbjct: 452 DLSVSGEAGIEE 463
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 216 RTKLSQFTSRRNIWL 260
RTK + RR +WL
Sbjct: 30 RTKEERLQHRREVWL 44
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 19.8 bits (39), Expect = 7.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 179 YSY*MNAVVSNGSYKISP 126
Y Y N ++S + +ISP
Sbjct: 364 YQYNFNIIISEPTERISP 381
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,650
Number of Sequences: 438
Number of extensions: 1575
Number of successful extensions: 52
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6493812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -