Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P08
(253 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0135 - 15118082-15118300,15118388-15118546,15118783-151188... 33 0.024
12_02_1169 - 26655170-26655332,26655429-26655504,26655603-266557... 33 0.032
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 32 0.056
02_05_0177 + 26505956-26506202,26506838-26507247,26507448-265076... 32 0.074
10_08_0424 - 17803984-17805270 30 0.22
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 29 0.39
05_03_0074 + 8095355-8096575,8096664-8096901,8096990-8097667,809... 29 0.69
03_01_0645 - 4731037-4731543,4731706-4731933 28 1.2
08_01_0537 + 4666488-4666870,4667706-4667850,4668299-4668392,466... 27 1.6
07_03_0394 - 17633753-17636788 27 1.6
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 2.1
02_05_0075 - 25610386-25610508,25610529-25610583,25610801-256112... 27 2.8
01_06_1620 + 38697960-38698131,38698532-38700732 27 2.8
01_03_0001 + 11500567-11500696,11503312-11503397,11503515-115040... 27 2.8
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 26 3.7
06_03_0470 - 21113186-21114183,21114273-21115824 26 4.8
04_04_0040 + 22322839-22324173 26 4.8
02_01_0017 - 112766-113650 26 4.8
11_04_0167 + 14382976-14385244,14389373-14389842 25 6.4
08_01_0052 + 361505-361969,362270-362348,362816-362880,363069-36... 25 6.4
07_03_1455 - 26659480-26659758,26659907-26660149 25 6.4
04_03_0183 + 12352147-12352179,12352390-12353349,12353815-123539... 25 6.4
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743... 25 6.4
02_05_0806 - 31867656-31867724,31867872-31867929,31868038-318682... 25 6.4
12_01_0114 - 875714-876652 25 8.4
11_01_0108 - 837309-838247 25 8.4
10_08_1037 - 22477358-22478752 25 8.4
06_03_0673 + 23394027-23394094,23394267-23394539,23394613-233949... 25 8.4
06_03_0609 + 22710442-22713502,22713596-22713948 25 8.4
06_01_0245 - 1849156-1849197,1849300-1849341,1849564-1849605,184... 25 8.4
05_03_0071 - 8044217-8045142,8045303-8045411,8045634-8046854 25 8.4
04_04_0395 - 24911449-24911719,24912048-24912400,24912486-249125... 25 8.4
02_02_0535 - 11292509-11294679,11294971-11295040,11295268-112953... 25 8.4
02_02_0529 - 11208973-11211143,11211703-11211772,11211993-112120... 25 8.4
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 25 8.4
01_05_0416 + 21956050-21956512,21958001-21958065,21958772-219589... 25 8.4
>10_08_0135 -
15118082-15118300,15118388-15118546,15118783-15118849,
15118969-15119141,15119602-15119698,15119782-15119900,
15120000-15120140,15120214-15120298,15120411-15120612,
15120906-15120970,15121365-15121654
Length = 538
Score = 33.5 bits (73), Expect = 0.024
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQPHTTNLIEL-LPHSLRTPVDPEGTATANRETAYSGQLQGN 193
+GTLLA+T+V+ VL++RY P ++ LP S + G + + E + GN
Sbjct: 469 VGTLLAFTMVAISVLIVRYAPPNEIATKVALPGSSESLTSDSGYSEPDEENSEDLLGNGN 528
Query: 194 IQTGN 208
T +
Sbjct: 529 ENTSD 533
>12_02_1169 -
26655170-26655332,26655429-26655504,26655603-26655715,
26655808-26655913,26656001-26656235,26656415-26656573,
26657279-26657377,26657472-26657568,26657650-26657768,
26657860-26658000,26658100-26658184,26658287-26658488,
26659274-26659379
Length = 566
Score = 33.1 bits (72), Expect = 0.032
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQP 79
+GTLLA+T+V+ +L+LRY P
Sbjct: 339 VGTLLAFTIVAVSILILRYAP 359
>03_05_0530 -
25306788-25306919,25307446-25308037,25308152-25308975,
25309533-25309592,25310115-25310180,25310318-25310461,
25310616-25310756,25310898-25311056,25311818-25311884,
25311986-25312158,25312237-25312333,25312410-25312528,
25312867-25312951,25313120-25313321,25314456-25314633
Length = 1012
Score = 32.3 bits (70), Expect = 0.056
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQP 79
+GTLLA+T+V+ +L+LRY P
Sbjct: 363 VGTLLAFTIVAVSILILRYIP 383
>02_05_0177 +
26505956-26506202,26506838-26507247,26507448-26507624,
26507775-26507999,26508089-26508265,26508357-26508593,
26508855-26508944,26509102-26509254
Length = 571
Score = 31.9 bits (69), Expect = 0.074
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQPHTTN 91
+GTL Y++VS CV+ LR+ TT+
Sbjct: 409 VGTLTGYSVVSACVITLRWNDKTTS 433
>10_08_0424 - 17803984-17805270
Length = 428
Score = 30.3 bits (65), Expect = 0.22
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 10 KNHRHSSGLHLSIYLRVSSALPTAHHQPDRTATPQPQNTGRS 135
+ HRH L + LR SALP H P +TP + RS
Sbjct: 6 RRHRHPHPLPAAHLLRRFSALPDVDHPPPPASTPTTPASTRS 47
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 25 SSGLHLSIYLRVSSALPTAHHQPDRTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHP 198
+SG+H L +S P Q A PQP+N + H +PG+ +G + P
Sbjct: 755 ASGVHDMPSLNNTSGQPKPFFQSQEAAVPQPRN--ENTWVYHGRPGDGKYGTTDKSRP 810
>05_03_0074 +
8095355-8096575,8096664-8096901,8096990-8097667,
8097787-8097974
Length = 774
Score = 28.7 bits (61), Expect = 0.69
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 219 MMRWLPVWMFP*SWPEYAVSRFA 151
M R+LP W F W EY+V R A
Sbjct: 149 MRRFLPKWFFEFKWLEYSVHRDA 171
>03_01_0645 - 4731037-4731543,4731706-4731933
Length = 244
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 135 PRELPLQTGKLHIRASFKETSKPVTNASWSAESLA 239
PR +P+Q K H ++ + T+KP A+ +AE LA
Sbjct: 143 PRRVPIQEAKKHRSSAVETTTKPA--AAVAAEKLA 175
>08_01_0537 +
4666488-4666870,4667706-4667850,4668299-4668392,
4668518-4668798
Length = 300
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 71 YQPHTTNLIELLPHSLRTPVDPEGTATANRETAYSGQ 181
Y+ H +L+ P + V PE A A+ E + SG+
Sbjct: 202 YKTHQQSLVYTFPEGTASVVSPEKLADASSENSSSGE 238
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 99 NCYPTA-SEHRSIPRELPLQTGKLHIRASFKETSKPVTN 212
NC+ +A S H S P + GK+ IR S ET + T+
Sbjct: 669 NCHISADSNHSSSPGHMDKPIGKVRIRLSTLETGRVYTH 707
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 1 ARGKNHRHSSGLHLSIYLRVSSALPTAHHQPDRTATPQ 114
+ +++ S LHL + R S P Q D+ A+PQ
Sbjct: 561 SHSRSYSRSHSLHLHDHARTRSCSPAPGRQDDQYASPQ 598
>02_05_0075 -
25610386-25610508,25610529-25610583,25610801-25611240,
25612951-25613619,25614551-25615870
Length = 868
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +1
Query: 7 GKNHRHSSGLHLSIYLRVSSALPTAHHQPDRTATPQPQNTGRSRGNCHCKP 159
G + R S+ S SSA PT + A PQPQ N KP
Sbjct: 292 GGSGRTSASAAASCSSSSSSAPPTPDESHTQQAQPQPQQPTEESSNTEPKP 342
>01_06_1620 + 38697960-38698131,38698532-38700732
Length = 790
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 141 PSGSTGVLRLWGSSSIRLVVCGW*RRTNTQV 49
PSG+T + LW SSS+ W T T V
Sbjct: 201 PSGATQYILLWNSSSVYWASGNWTGNTYTGV 231
>01_03_0001 +
11500567-11500696,11503312-11503397,11503515-11504097,
11504242-11504474
Length = 343
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 HTTNLIE-LLPHSLRTPVDPEGTATANRETAYSGQLQGNIQTGNQRIMVRRVTRSSPD 250
H N+I+ LLP ++ P D A + +Q N QT + ++V+ + PD
Sbjct: 196 HYANIIKKLLPPNVMQPCDLINALPQQPAAATACCMQSNTQTVSSALLVKGMQNHPPD 253
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 108 PTASEHRSIPRELPLQ-TGKLHIRASF-KETSKPVTNASWSAESL 236
P + S P LP + T K R S K + PVT +SWS SL
Sbjct: 624 PQRARRNSSPPVLPKELTPKAPARKSSPKPSPAPVTRSSWSGGSL 668
>06_03_0470 - 21113186-21114183,21114273-21115824
Length = 849
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 219 MMRWLPVWMFP*SWPEYAVSRFA 151
M R+LP W W EY+V+R A
Sbjct: 151 MRRFLPKWFDEFKWLEYSVNRDA 173
>04_04_0040 + 22322839-22324173
Length = 444
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 166 SFPVCSGSSLGIDRCSEAVG*QFDQVGGVRLV 71
+ P GS +G+D C A DQV RLV
Sbjct: 345 ALPAADGSGVGLDLCFRAPAKGVDQVEVPRLV 376
>02_01_0017 - 112766-113650
Length = 294
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 169 IFGPASRKHPNR*PTHHGPP 228
+ PA+ + P R PTHH PP
Sbjct: 104 LLDPATPQKPRR-PTHHSPP 122
>11_04_0167 + 14382976-14385244,14389373-14389842
Length = 912
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 8 GKIIGTLLAYTLVSTCVLVLRYQPHTTNLIELLPHSLRT-PVDPE 139
G IIG ++A ++ C+ +L + N+ + P S +T P + E
Sbjct: 478 GMIIGIIVAVIILFACIALLVHHRKKKNVEKFRPVSTKTSPAESE 522
>08_01_0052 +
361505-361969,362270-362348,362816-362880,363069-363236,
363731-364171
Length = 405
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 74 QPHTTNLIELLPHSLRTPVDPEGTATANR 160
+P+T +IE L H + VDP T+ R
Sbjct: 128 RPYTITMIERLMHDVHFAVDPNLTSKEQR 156
>07_03_1455 - 26659480-26659758,26659907-26660149
Length = 173
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 94 DRTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHPNR*PTHHGP 225
+R +PQ +R C+PG+ AS HP P GP
Sbjct: 56 ERYPRQRPQEGYDTRRCSRCRPGDHRNPAASSLHPTAPPLRAGP 99
>04_03_0183 +
12352147-12352179,12352390-12353349,12353815-12353998,
12354087-12354799
Length = 629
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 219 MMRWLPVWMFP*SWPEYAVSRFA 151
M R+LP W W EY+V R A
Sbjct: 179 MRRFLPKWFSEFKWLEYSVRRDA 201
>03_02_0762 -
10968888-10969466,10972522-10974175,10974277-10974359,
10974435-10974533,10974620-10974706,10974782-10974838,
10974939-10975065,10975344-10975465,10975685-10975732,
10975867-10976268
Length = 1085
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 123 HRSIPRELP-LQTGKLHIRASFKETSKPVT 209
H+ I R+L + G+LH + F++T+ P+T
Sbjct: 139 HKGIERDLEGNKLGELHRKGLFEKTTAPIT 168
>02_05_0806 -
31867656-31867724,31867872-31867929,31868038-31868212,
31868297-31868373,31868434-31868537
Length = 160
Score = 25.4 bits (53), Expect = 6.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 88 QPDRTATPQPQNTGRSRGNCHCK 156
+P +A P+P+ G++ G C C+
Sbjct: 15 RPASSAPPEPRRNGKAAGVCCCE 37
>12_01_0114 - 875714-876652
Length = 312
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 37 HLSIYLRVSSALPTAHHQPDRTATPQPQNTGRSRGN 144
H SI + SSA+P P P TGRS+G+
Sbjct: 201 HFSIVVN-SSAIPPGPVPSGNITPPIPTPTGRSKGS 235
>11_01_0108 - 837309-838247
Length = 312
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 37 HLSIYLRVSSALPTAHHQPDRTATPQPQNTGRSRGN 144
H SI + SSA+P P P TGRS+G+
Sbjct: 201 HFSIVVN-SSAIPPGPVPSGNITPPIPTPTGRSKGS 235
>10_08_1037 - 22477358-22478752
Length = 464
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 19 RHSSGLHLSIYLRVSSALPTAHHQPDRTATPQPQ 120
RHS H L S P H P R PQ Q
Sbjct: 227 RHSPAAHRGDPLPASPPQPQHQHHPHRPLPPQHQ 260
>06_03_0673 +
23394027-23394094,23394267-23394539,23394613-23394958,
23395031-23395168,23395260-23395385,23395464-23395652,
23395723-23396202,23396274-23397236
Length = 860
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 243 ELRVTRRTMMRWLPVWMFP*SWPEYAVSRFAVAVPSG-STGVLRLWGSSSIRLVVCGW 73
E + MRW + + P S ++ AV G G + WG+ +L + GW
Sbjct: 744 EAALASEITMRWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGW 801
>06_03_0609 + 22710442-22713502,22713596-22713948
Length = 1137
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 138 SGSTGVLRLWGSSSIRLVVCGW 73
SG TGVL W ++S L+ C W
Sbjct: 46 SGPTGVLASWNNAS--LLPCNW 65
>06_01_0245 -
1849156-1849197,1849300-1849341,1849564-1849605,
1849697-1849824,1850078-1850285,1850381-1850561,
1851761-1852114,1852577-1852803
Length = 407
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 88 QPDRTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHPN 201
Q D T + GNC+ C FG S KHPN
Sbjct: 307 QKDYVVTCCSLISSNDNGNCY----TCKFGNRSMKHPN 340
>05_03_0071 - 8044217-8045142,8045303-8045411,8045634-8046854
Length = 751
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 219 MMRWLPVWMFP*SWPEYAVSRFA 151
M R+LP W W EY+V R A
Sbjct: 149 MHRFLPKWFSEFKWLEYSVHRDA 171
>04_04_0395 -
24911449-24911719,24912048-24912400,24912486-24912560,
24912799-24912891,24912988-24913231,24913437-24913564
Length = 387
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 177 PEYAVSRFAVAVPSGSTGVLRLWGSSSIRLVVCGW-*RRTNTQVDTKV 37
PE SRF + VPS + + + G + R CG +R + D KV
Sbjct: 21 PEPETSRFFILVPSSNLLAVAIRGGDTHREGTCGMEVKRPKSCADGKV 68
>02_02_0535 -
11292509-11294679,11294971-11295040,11295268-11295324,
11298629-11298789,11299123-11299156
Length = 830
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 38 TLVSTCVLVLRYQPHTTNLIELLPHSLRTPVDPEGTATAN 157
T VSTCV+ L + L ++ SL+ P+ P G A +
Sbjct: 661 TAVSTCVVRLELSGLSACLAAIVCSSLQPPLRPLGHAAGD 700
>02_02_0529 -
11208973-11211143,11211703-11211772,11211993-11212049,
11212769-11212819,11213112-11213264,11216095-11216255,
11216609-11216642
Length = 898
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 38 TLVSTCVLVLRYQPHTTNLIELLPHSLRTPVDPEGTATAN 157
T VSTCV+ L + L ++ SL+ P+ P G A +
Sbjct: 729 TAVSTCVVRLELSGLSACLAAIVCSSLQPPLRPLGHAAGD 768
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 115 PQNTGRSRGNCHCKPGNCIFGPASRKHPNR 204
P+ G+ + K G C FGP + H R
Sbjct: 123 PERMGQPECQYYLKTGTCKFGPTCKFHHPR 152
>01_05_0416 +
21956050-21956512,21958001-21958065,21958772-21958933,
21959006-21959107
Length = 263
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 4 RGKNHRHSSGLHLSIYLRVSSALPTAHHQPDRTATPQPQNTGRS 135
RGK HR G + + + H PD T P T S
Sbjct: 16 RGKTHRSKLGTKIGPHSHRAHEALARHKSPDFRRTGPPSRTNTS 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,095,874
Number of Sequences: 37544
Number of extensions: 175131
Number of successful extensions: 606
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 14,793,348
effective HSP length: 62
effective length of database: 12,465,620
effective search space used: 261778020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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