Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P08
(253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 41 1e-04
AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical ... 38 7e-04
AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical ... 32 0.062
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 29 0.58
AF024503-10|AAG24095.1| 399|Caenorhabditis elegans Hypothetical... 29 0.58
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 28 0.76
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 28 0.76
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 27 1.3
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 27 1.8
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 27 1.8
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 27 1.8
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 27 1.8
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 27 2.3
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 27 2.3
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 26 3.1
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 26 3.1
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 26 3.1
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 26 3.1
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 26 3.1
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 26 3.1
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 26 3.1
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 26 3.1
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 26 3.1
Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical pr... 26 4.1
U46671-7|AAA85752.1| 194|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical ... 26 4.1
AF024498-11|AAF39802.1| 310|Caenorhabditis elegans Serpentine r... 26 4.1
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 25 5.4
Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical pr... 25 5.4
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 25 5.4
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 25 5.4
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 25 7.1
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 25 7.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 25 7.1
AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical ... 25 7.1
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 25 7.1
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 25 7.1
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 25 7.1
Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 25 9.4
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 25 9.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 25 9.4
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 25 9.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 25 9.4
AF100657-5|AAC68960.1| 451|Caenorhabditis elegans Hypothetical ... 25 9.4
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQP 79
IGTLLAY++VS CV+VLRYQP
Sbjct: 394 IGTLLAYSIVSACVIVLRYQP 414
>AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical
protein F23F1.6 protein.
Length = 583
Score = 38.3 bits (85), Expect = 7e-04
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQPH 82
IGTLLAY++VS CV++LR+Q H
Sbjct: 395 IGTLLAYSMVSICVIILRHQSH 416
>AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical
protein B0454.6 protein.
Length = 585
Score = 31.9 bits (69), Expect = 0.062
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 17 IGTLLAYTLVSTCVLVLRYQ 76
IGTL AY+ VS VLVLRYQ
Sbjct: 394 IGTLFAYSFVSGSVLVLRYQ 413
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 105 YPTASEHRSIPRELPLQTGKLHIRASFKETSKPVTNAS 218
+PT + ++P P GK+ +R+ K SK V N+S
Sbjct: 449 FPTVTTTTTMPPSYPYYPGKIGVRSISKPLSKNVFNSS 486
>AF024503-10|AAG24095.1| 399|Caenorhabditis elegans Hypothetical
protein F31F4.12 protein.
Length = 399
Score = 28.7 bits (61), Expect = 0.58
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 208 VTGLDVSLKLARICSFPVCSGSSLGIDRC 122
V+ ++S K +IC C G+ G+D C
Sbjct: 6 VSSTEISHKTCQICKVEKCHGNHFGVDSC 34
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 28.3 bits (60), Expect = 0.76
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 61 SSALPTAHHQPDRTATPQPQNTGRSRGNCH-CKPGNCIFGPASR-------KHPNR*PTH 216
SS+ + HH +R + ++ R R CH + GNC +GP R +H N T
Sbjct: 163 SSSSASKHHDENRRPSNNHGSSNR-RQICHNFERGNCRYGPRCRFIHVEQMQHFNANATV 221
Query: 217 HGPPS 231
+ PPS
Sbjct: 222 YAPPS 226
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 0.76
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 61 SSALPTAHHQPDRTATPQPQNTGRSRGNCH-CKPGNCIFGPASR-------KHPNR*PTH 216
SS+ + HH +R + ++ R R CH + GNC +GP R +H N T
Sbjct: 163 SSSSASKHHDENRRPSNNHGSSNR-RQICHNFERGNCRYGPRCRFIHVEQMQHFNANATV 221
Query: 217 HGPPS 231
+ PPS
Sbjct: 222 YAPPS 226
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 79 AHHQPDRTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHPNR*PTHHGPPS 231
+HHQ + + QP N PG I P ++ P P H PP+
Sbjct: 272 SHHQQPQYSHQQPMNPQHHSPMTMMAPGQMIGHPIQQQRP---PMHQMPPN 319
>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
protein F17C8.1 protein.
Length = 1253
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 78 RTPPT*SNCYPTASEHRSIPRELPL 152
RTP +C P+ H S PR +PL
Sbjct: 8 RTPALGGSCGPSVRAHSSSPRRVPL 32
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 130 RSRGNCHC--KPGNCIFGPASRKHPNR*PTHHGPPSHSQLSG 249
RS G C C +P NC GPA P G P + +G
Sbjct: 75 RSGGTCGCGAQPNNCPAGPAGPPGAPGAPGEDGTPGQAGKNG 116
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 130 RSRGNCHC--KPGNCIFGPASRKHPNR*PTHHGPPSHSQLSG 249
RS G C C +P NC GPA P G P + +G
Sbjct: 75 RSGGTCGCGAQPNNCPAGPAGPPGAPGAPGEDGTPGQAGKNG 116
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 167 QFPGLQWQFPRDRPVF*GCGVAVRSGWWCAVG 72
+FPG Q + P R ++ G G SGW+ G
Sbjct: 191 RFPGAQGRMPGGRGMYGGRGGNNNSGWYAGWG 222
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 167 QFPGLQWQFPRDRPVF*GCGVAVRSGWWCAVG 72
+FPG Q + P R ++ G G SGW+ G
Sbjct: 191 RFPGAQGRMPGGRGMYGGRGGNNNSGWYAGWG 222
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +1
Query: 73 PTAHHQPDRTATPQPQ---NTGRSRGN 144
P HHQ RT +PQP G S GN
Sbjct: 1149 PYYHHQQPRTPSPQPHIVVENGTSSGN 1175
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform b protein.
Length = 1234
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +1
Query: 73 PTAHHQPDRTATPQPQ---NTGRSRGN 144
P HHQ RT +PQP G S GN
Sbjct: 1149 PYYHHQQPRTPSPQPHIVVENGTSSGN 1175
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 117 TVSPAPGNCCPPPGSCHCDQKKCV 140
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 117 TVSPAPGNCCPPPGSCHCDQKKCV 140
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 100 TATPQPQNTGRSRGNCHCKPGNCI 171
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical
protein K09E4.4 protein.
Length = 715
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 207 LPVWMFP*S-WPEYAVSRFAVAVPSGSTGVLRLW 109
L W F WP +A+ F A+P G+ +L L+
Sbjct: 360 LQSWSFTYDQWPAWAIKSFLSAIPVGNLLILDLY 393
>U46671-7|AAA85752.1| 194|Caenorhabditis elegans Hypothetical
protein C14E2.6 protein.
Length = 194
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 52 LRVSSALPTAHHQPDRTATPQPQNTGRSRGNCHCKPGNCIFG 177
LR+S LP AHH P+ T R + +C+ G
Sbjct: 126 LRISQTLPAAHHNTFEIYYPKHMTTDNYRICDQAETESCLKG 167
>AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical
protein T25B2.2 protein.
Length = 462
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 46 IYLRVSSALPTAH--HQPDRTATPQPQNTGRSRGNCHCKP 159
+ ++V +PT H R+ATP P NT R + P
Sbjct: 423 VTIQVPDEIPTQPKGHFVHRSATPSPNNTSNGRREKNASP 462
>AF024498-11|AAF39802.1| 310|Caenorhabditis elegans Serpentine
receptor, class x protein108 protein.
Length = 310
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 222 TMMRWLPVWMFP*SWPEYAVSRFAVAVPSGSTGVLRLWGSSSIRL-VVC 79
T+ R+L VW P + P Y+ +R VA G + + +W S+ + + +C
Sbjct: 102 TINRFLVVWFSPVNTPRYS-TRITVAA-MGISWIFTVWFSTLVGMPAIC 148
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 208 VTGLDV-SLKLARICSFPVCSGSSLGIDRCSEA 113
VT D+ SLKLA F + G I+RC EA
Sbjct: 475 VTEQDLKSLKLAEKLDFEIVDGMESEIERCYEA 507
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 208 VTGLDV-SLKLARICSFPVCSGSSLGIDRCSEA 113
VT D+ SLKLA F + G I+RC EA
Sbjct: 475 VTEQDLKSLKLAEKLDFEIVDGMESEIERCYEA 507
>Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical
protein C05D12.1 protein.
Length = 498
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 210 WLPVWMFP*SWPEYAVSRFAVAVPSGSTGVLRLWG 106
WL V MF SW A + +A+P G TG+ RL+G
Sbjct: 366 WL-VGMF--SW-SVASATIVLALPMGKTGLNRLYG 396
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +3
Query: 96 SNCYPTASEHRSIPRELPLQTGKLHIRASFKETSKPVTNASWSAES 233
S+ P S+ + E P G LH + SKP W A S
Sbjct: 53 SSVSPNTSKKSATGLETPKSAGNLHSQDRNLSCSKPKITPVWKAPS 98
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 118 QNTGRSRGNCHCKPGNCIFGPASRKHPNR*PTHHGP 225
+N ++ NC K C GP + PN P GP
Sbjct: 76 RNKRNAQCNCGAKSKGCPAGPPGPRGPNGAPGLDGP 111
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 19 RHSSGLHLSIYLRVSSALPTAHHQPD 96
R+ SGL I +S+LP A PD
Sbjct: 322 RNGSGLFCQIVKSANSSLPVAEQSPD 347
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 14 IIGTLLAYTLVSTCVLVLRYQ-PHTTNLIELLPHSLRT 124
++ +AY+L S ++V R++ P +NLIELL S +T
Sbjct: 44 VLSAPVAYSL-SELIMVARHKSPAVSNLIELLIPSSKT 80
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 97 RTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHPNR*PTHHGP 225
R A P + + PG G A+R+ P+R PT P
Sbjct: 25 RAAAPSTKEANSTTIPRQSAPGGITIGAAARRPPSRLPTPTTP 67
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 114 ASEHRSIPRELPLQTGKLHIRASFKETSKPVTN 212
A++HR +PR+LP +++I + K V +
Sbjct: 1149 AAKHRPVPRKLPTNIERMYIERAHMVKYKHVVD 1181
>AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical
protein F56B3.2b protein.
Length = 295
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 115 PQNTGRSRGNCHCKPG 162
PQN+G RG C C+ G
Sbjct: 223 PQNSGCYRGRCMCRCG 238
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 115 PQNTGRSRGNCHCKPG 162
PQN+G RG C C+ G
Sbjct: 360 PQNSGCYRGRCMCRCG 375
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 129 SIPRELPLQTGKLHIRASFKETSKPVTNASWSAESLAA 242
S+P +P+QT + H S+++T PV +S++A A+
Sbjct: 85 SVPHPIPIQTQQFH--NSYQQT--PVFTSSYNAPPFAS 118
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 97 RTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHPNR*PTHHGP 225
R A P + + PG G A+R+ P+R PT P
Sbjct: 25 RAAAPSTKEANSTTIPRQSAPGGITIGAAARRPPSRLPTPTTP 67
>Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical
protein B0513.1 protein.
Length = 627
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 69 ATNRTPPT*SNCYPTASEHRSIPRELPL 152
A N TPP + Y A E ++IP L +
Sbjct: 190 AANPTPPNSKDAYSPALEQKAIPALLAI 217
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 82 HHQPDRTATPQPQNTGRSRGNCHC--KPGNCIFGPASRKHPNR*PTHHGPPSHSQLSG 249
H+ P+ + + +S +C+C +P NC GPA P G P + +G
Sbjct: 61 HNAPNTLDSLFKRGKRQSGSSCNCGPQPSNCPAGPAGPPGEPGQPGDDGAPGKAGDNG 118
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 49 YLRVSSALPTAHHQPDRTATPQPQNTGRSR 138
YL +S+LP HH + P N+ ++
Sbjct: 2013 YLSSNSSLPPQHHHVSPLSNDSPSNSAENK 2042
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 49 YLRVSSALPTAHHQPDRTATPQPQNTGRSR 138
YL +S+LP HH + P N+ ++
Sbjct: 2016 YLSSNSSLPPQHHHVSPLSNDSPSNSAENK 2045
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 85 HQPDRTATPQPQNTGRSRGNCHCKPGNCIFG 177
H R P+P TG G + + G +FG
Sbjct: 125 HTVKRWVQPEPVFTGEGAGTLYLRLGTVLFG 155
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 24.6 bits (51), Expect = 9.4
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 82 HHQPDRTATPQ-PQNTGRSRGNCHCKPGNCIFGPASRKH-PNR*PTHHGPPSHSQLSG 249
H R P P GR H G+ G H P R HHGPP H G
Sbjct: 351 HGHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGR-HGHHGPPHHHHHDG 407
>AF100657-5|AAC68960.1| 451|Caenorhabditis elegans Hypothetical
protein F52C12.1 protein.
Length = 451
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 91 PDRTATPQPQNTGRSRGNCHCKPGNCIFGP 180
P T P P+ R + +PG+ F P
Sbjct: 11 PSSTTVPPPKKLNSQRNGSNLEPGSIYFTP 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,408,925
Number of Sequences: 27780
Number of extensions: 135057
Number of successful extensions: 509
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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