Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P07
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 116 4e-27
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 116 4e-27
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 34 0.036
AF125459-10|AAD12841.2| 177|Caenorhabditis elegans Serpentine r... 31 0.19
AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine r... 29 1.0
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 28 2.4
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 28 2.4
AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical ... 28 2.4
Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical p... 27 5.4
DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. 27 5.4
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 27 5.4
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 5.4
AF038622-3|AAL06048.1| 254|Caenorhabditis elegans Hypothetical ... 27 5.4
Z81081-2|CAB03091.2| 451|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF125954-4|AAD14710.1| 337|Caenorhabditis elegans Seven tm rece... 26 7.2
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 26 7.2
AC006769-5|AAF60577.2| 339|Caenorhabditis elegans Hypothetical ... 26 7.2
Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical p... 26 9.5
AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical... 26 9.5
AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical ... 26 9.5
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 116 bits (280), Expect = 4e-27
Identities = 54/116 (46%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Frame = +1
Query: 25 LLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEVPMLLRELPN 204
LLDTT+MY+YF ++TP M + R + +L+ S EF K++N EI ER TD+ EVP L++++
Sbjct: 227 LLDTTRMYYYFINRTPRMEIGRMIAVLSGSFEFSKQYNKEIQERETDDYEVPRLMKQIAG 286
Query: 205 LGEKNKEQPLCRPYSIEARALLHAHLSRMRLPP--ETLECDRRYIVSRCPDLIVEM 366
+ +K KEQPL +PY++++R LLHA+LSR+ L + LE D+ YI++R + EM
Sbjct: 287 VNDKGKEQPLSQPYALKSRVLLHAYLSRLPLESQNDALEEDQSYIITRILRFVEEM 342
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 116 bits (280), Expect = 4e-27
Identities = 54/116 (46%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Frame = +1
Query: 25 LLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEVPMLLRELPN 204
LLDTT+MY+YF ++TP M + R + +L+ S EF K++N EI ER TD+ EVP L++++
Sbjct: 227 LLDTTRMYYYFINRTPRMEIGRMIAVLSGSFEFSKQYNKEIQERETDDYEVPRLMKQIAG 286
Query: 205 LGEKNKEQPLCRPYSIEARALLHAHLSRMRLPP--ETLECDRRYIVSRCPDLIVEM 366
+ +K KEQPL +PY++++R LLHA+LSR+ L + LE D+ YI++R + EM
Sbjct: 287 VNDKGKEQPLSQPYALKSRVLLHAYLSRLPLESQNDALEEDQSYIITRILRFVEEM 342
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.9 bits (74), Expect = 0.036
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Frame = +1
Query: 46 YFYFCHKTP---SMPLK-----RALM-ILAASCEFDK---RHNSEIVERITDNEEVPMLL 189
Y+Y ++T SM LK RAL+ I++AS EF RH +++ R L
Sbjct: 1820 YYYISYQTIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVILR--------QLA 1871
Query: 190 RELPNLGEKNKEQPLCRPYSIEARALLHAHLSRMRLPPETLECDRRYIVSRCPDLI 357
LP + K Q P+ ++ L+HAHLSR++L E L D IV R L+
Sbjct: 1872 ERLPG---QLKNQKFTDPH-VKVNLLIHAHLSRVKLTAE-LNKDTELIVLRACRLV 1922
>AF125459-10|AAD12841.2| 177|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 23 protein.
Length = 177
Score = 31.5 bits (68), Expect = 0.19
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 16 RTSLLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEV 177
+T++ TQ+YF F PS+P RA M+L A FD H + + N E+
Sbjct: 113 QTTMYAVTQIYFAFL--APSIPSIRATMVLIAFNIFDVMHVYSPIALLISNWEL 164
>AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 24 protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 16 RTSLLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEV 177
+T+L TQ+YF F S+P RA+M+ A FD +H + + N E+
Sbjct: 251 QTTLFAFTQIYFAFL--ATSIPSIRAMMLSIAFHIFDVQHVYSPIALLISNREL 302
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 2.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 290 CGFHQKPSSVTDVTSCP 340
C FH K S++ + TSCP
Sbjct: 299 CSFHIKSSAIAETTSCP 315
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 61 HKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEVPMLLRELPNLGEKNKEQPLCR 240
HK+ + + R + ++ + HN +++ R + + ELP L EK + L
Sbjct: 658 HKSTATAIARQIGMIDTEEVTNLDHNRQVIRRTNSQDWAVITGPELPGLSEKQWDALLEH 717
Query: 241 PYSIEAR 261
Y + AR
Sbjct: 718 RYIVFAR 724
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 61 HKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEVPMLLRELPNLGEKNKEQPLCR 240
HK+ + + R + ++ + HN +++ R + + ELP L EK + L
Sbjct: 658 HKSTATAIARQIGMIDTEEVTNLDHNRQVIRRTNSQDWAVITGPELPGLSEKQWDALLEH 717
Query: 241 PYSIEAR 261
Y + AR
Sbjct: 718 RYIVFAR 724
>AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical
protein Y50D7A.2 protein.
Length = 606
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 IVERITDNEEVPMLLRELPNLGEK----NKEQPLCRPYSIEARALLHAHL 282
+VE + + ++ P+L++ PN E +E+ +C PY +A+ AH+
Sbjct: 5 VVETLKNTKKTPILMKFCPNFQEDLRSLGREKKIC-PYFTARQAINRAHI 53
>Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 16 RTSLLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIV---ERITDNEEVPML 186
R ++ + YFCH++ L+R + SC + +R + + E+ E+ +
Sbjct: 108 RKTIFQAVSLLLYFCHESEHENLQRLAQQVKTSCLYVERTMTSAMRMREKAIRRSEIVNI 167
Query: 187 LRELPN 204
L + N
Sbjct: 168 LNSVSN 173
>Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 16 RTSLLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIV---ERITDNEEVPML 186
R ++ + YFCH++ L+R + SC + +R + + E+ E+ +
Sbjct: 108 RKTIFQAVSLLLYFCHESEHENLQRLAQQVKTSCLYVERTMTSAMRMREKAIRRSEIVNI 167
Query: 187 LRELPN 204
L + N
Sbjct: 168 LNSVSN 173
>DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein.
Length = 801
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 16 RTSLLDTTQMYFYFCHKTPSMPLKRALMILAASCEFDKRHNSEIV---ERITDNEEVPML 186
R ++ + YFCH++ L+R + SC + +R + + E+ E+ +
Sbjct: 108 RKTIFQAVSLLLYFCHESEHENLQRLAQQVKTSCLYVERTMTSAMRMREKAIRRSEIVNI 167
Query: 187 LRELPN 204
L + N
Sbjct: 168 LNSVSN 173
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 159 YSFDNFRIMPFVELTG 112
YSF+NFR +PF TG
Sbjct: 692 YSFENFRKLPFFRQTG 707
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 159 YSFDNFRIMPFVELTG 112
YSF+NFR +PF TG
Sbjct: 692 YSFENFRKLPFFRQTG 707
>AF038622-3|AAL06048.1| 254|Caenorhabditis elegans Hypothetical
protein R07C12.4 protein.
Length = 254
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 222 GTTTLSAVQ--YRSTRFVTCASFSHAASTRNP 311
G+ +L V+ Y ST+F TC S S RNP
Sbjct: 37 GSDSLKIVEKFYNSTQFSTCGSIVLILSKRNP 68
>Z81081-2|CAB03091.2| 451|Caenorhabditis elegans Hypothetical
protein F42D1.3 protein.
Length = 451
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -1
Query: 304 LVEAACEKDAHVTKRVLRYCTADKVVVPYFSHQDSATHVKA*ELLHCLLFFRQFQNYA 131
L EA E+DA R C DK ++P + D+ V ++ L+ F F N A
Sbjct: 22 LAEACVEQDASYFDGCSRTCVKDKYLLP-LTQFDNLEIVVYGQIFPILVLFAVFANAA 78
>AF125954-4|AAD14710.1| 337|Caenorhabditis elegans Seven tm
receptor protein 119 protein.
Length = 337
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 220 YFSHQDSA--THVKA*ELLHCLLFFRQFQNYAFCRTH 116
YF++ A + A + L LL R F+N FCR H
Sbjct: 277 YFANAPGAWISFYPAIDALIALLMIRDFRNAVFCRKH 313
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 61 HKTPSMPLKRALMILAASCEFDKRHNSEIVERITDNEEVPMLLRELPNLGEKNKEQPLCR 240
HK+ + + R + ++ HN +I+ R + + ELP L +K ++ L
Sbjct: 654 HKSTATAIARQIGMIDTEEVSRVDHNQQIIRRSNSQDWAVITGSELPALTQKQWDELLQH 713
Query: 241 PYSIEAR 261
Y + AR
Sbjct: 714 RYIVFAR 720
>AC006769-5|AAF60577.2| 339|Caenorhabditis elegans Hypothetical
protein Y45G12C.10 protein.
Length = 339
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 220 YFSHQDSA--THVKA*ELLHCLLFFRQFQNYAFCRTH 116
YF++ A + A + L LL R F+N FCR H
Sbjct: 279 YFANAPGAWISFYPAIDALIALLMIRDFRNAVFCRKH 315
>Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical
protein T28F3.9 protein.
Length = 513
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = -1
Query: 307 FLVEAACEKDAHVTKRVLRYCTADKVVVPYFSHQDSATHVKA*ELLHCLLFFRQFQNYAF 128
F+++ K+ + + L C + +V+P DS+ H + C+ QF+N+ +
Sbjct: 199 FVIDTKSSKEFKMNMKKLDDCFENIIVLPAEHSFDSSGHNQNLGHTECMQSLLQFENWTY 258
>Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical
protein T28F3.9 protein.
Length = 513
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = -1
Query: 307 FLVEAACEKDAHVTKRVLRYCTADKVVVPYFSHQDSATHVKA*ELLHCLLFFRQFQNYAF 128
F+++ K+ + + L C + +V+P DS+ H + C+ QF+N+ +
Sbjct: 199 FVIDTKSSKEFKMNMKKLDDCFENIIVLPAEHSFDSSGHNQNLGHTECMQSLLQFENWTY 258
>AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical
protein Y51H4A.25a protein.
Length = 513
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = -1
Query: 307 FLVEAACEKDAHVTKRVLRYCTADKVVVPYFSHQDSATHVKA*ELLHCLLFFRQFQNYAF 128
F+++ K+ + L C + +V+P DS+ H + C+ QF+N+ +
Sbjct: 199 FVIDTKSSKEFKTNMKKLADCFENIIVLPSKHSFDSSGHNQNLGHTECMQSLLQFENWTY 258
>AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical
protein Y51H4A.25a protein.
Length = 513
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = -1
Query: 307 FLVEAACEKDAHVTKRVLRYCTADKVVVPYFSHQDSATHVKA*ELLHCLLFFRQFQNYAF 128
F+++ K+ + L C + +V+P DS+ H + C+ QF+N+ +
Sbjct: 199 FVIDTKSSKEFKTNMKKLADCFENIIVLPSKHSFDSSGHNQNLGHTECMQSLLQFENWTY 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,066,696
Number of Sequences: 27780
Number of extensions: 177879
Number of successful extensions: 424
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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