Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P06
(382 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 222 2e-57
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 190 1e-47
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 150 1e-35
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 133 1e-30
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 132 3e-30
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 116 2e-25
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 105 4e-22
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 102 2e-21
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 97 1e-19
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 96 2e-19
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 95 3e-19
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 95 3e-19
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 95 5e-19
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 91 6e-18
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 83 2e-15
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 82 4e-15
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 80 1e-14
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 71 1e-11
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 65 5e-10
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 0.34
UniRef50_UPI00015B5B76 Cluster: PREDICTED: similar to GA18084-PA... 34 1.0
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 34 1.0
UniRef50_Q6CWX5 Cluster: Similar to sp|Q9C2M3 Neurospora crassa ... 34 1.0
UniRef50_A5V7X6 Cluster: TonB-dependent receptor precursor; n=1;... 33 1.8
UniRef50_Q58MZ4 Cluster: T4-like baseplate tail tube cap; n=1; C... 33 1.8
UniRef50_Q3A384 Cluster: Predicted PTS family phosphotransferase... 33 2.4
UniRef50_Q8SUV1 Cluster: Putative uncharacterized protein ECU07_... 33 2.4
UniRef50_Q4RIR6 Cluster: Chromosome 7 SCAF15042, whole genome sh... 32 3.2
UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=... 32 3.2
UniRef50_A1V9P0 Cluster: ComEC/Rec2-related protein; n=2; Desulf... 32 3.2
UniRef50_Q1D6A0 Cluster: Non-ribosomal peptide synthetase; n=7; ... 32 4.2
UniRef50_A4SA99 Cluster: Predicted protein; n=1; Ostreococcus lu... 31 5.5
UniRef50_A4Q9F4 Cluster: Polyglutamylase; n=2; Euteleostomi|Rep:... 31 7.3
UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3; ... 31 7.3
UniRef50_A1YGV0 Cluster: Extracellular serine proteinase; n=23; ... 31 7.3
UniRef50_A0E269 Cluster: Chromosome undetermined scaffold_74, wh... 31 7.3
UniRef50_UPI000058808D Cluster: PREDICTED: similar to trnS; n=1;... 31 9.6
UniRef50_Q6D8R0 Cluster: Putative membrane protein; n=1; Pectoba... 31 9.6
UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_A7A7T0 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_A0P380 Cluster: Sensor protein; n=1; Stappia aggregata ... 31 9.6
UniRef50_A0LD47 Cluster: Phosphonate ABC transporter, periplasmi... 31 9.6
UniRef50_A7PK49 Cluster: Chromosome chr15 scaffold_19, whole gen... 31 9.6
UniRef50_A0BKW3 Cluster: Chromosome undetermined scaffold_113, w... 31 9.6
UniRef50_Q2FKW4 Cluster: Sensor protein; n=1; Methanospirillum h... 31 9.6
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 222 bits (542), Expect = 2e-57
Identities = 103/116 (88%), Positives = 113/116 (97%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 380
AQVRFVTG KILRI+++ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLI
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLI 116
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 190 bits (462), Expect = 1e-47
Identities = 89/116 (76%), Positives = 101/116 (87%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
MGRMH+ GKGIS SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 380
QV+ VTG KILRI++A GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLI
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLI 116
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 150 bits (363), Expect = 1e-35
Identities = 67/116 (57%), Positives = 92/116 (79%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M RMH G+G + SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+
Sbjct: 1 MVRMHGNGRGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 380
AQV+ VTG+KILRI++ GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLI
Sbjct: 61 AQVKNVTGRKILRILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLI 116
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 133 bits (321), Expect = 1e-30
Identities = 72/115 (62%), Positives = 81/115 (70%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
MG MHAP K +SQS LPY SV WLK T+DD+KEQI+KL KKGLTPSQIGV LRD+H
Sbjct: 1 MGAMHAPRKALSQSVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTH-- 58
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 377
GLA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L
Sbjct: 59 ------------------GLALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCL 95
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 132 bits (318), Expect = 3e-30
Identities = 58/108 (53%), Positives = 82/108 (75%)
Frame = +3
Query: 57 KGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 236
KGI+ S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G
Sbjct: 6 KGIASSLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAG 65
Query: 237 KKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 380
+ I++I++ GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLI
Sbjct: 66 RNIVKILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLI 113
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 116 bits (278), Expect = 2e-25
Identities = 53/112 (47%), Positives = 79/112 (70%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M RMHA +G S S P R+ VP W++ T + V++ + +L KKG +QIG++LRD++G+
Sbjct: 1 MARMHARKRGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 368
V+ +TGKKI +IM+ GL P +PEDL L+++AV +RKHLE++ KD SK
Sbjct: 61 PDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSK 112
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 105 bits (251), Expect = 4e-22
Identities = 46/116 (39%), Positives = 69/116 (59%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M +MH+ GKG S S PY + PTWL + D++K + ++G KG+ IG LRD +G+
Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 380
+ V G+ I R ++ G+ P +P DL L+ +A +R HL RKD +K+RLI
Sbjct: 61 GKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLI 116
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 102 bits (245), Expect = 2e-21
Identities = 49/112 (43%), Positives = 76/112 (67%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M R+HA +G S S YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+
Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 368
V+ VTGKKI +I++ G+ PEDL LIKKA+ +R HLE +RKDK ++
Sbjct: 61 PSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNR 112
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 97.1 bits (231), Expect = 1e-19
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M RMHA +G S S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+
Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGI 60
Query: 213 AQVRFV-----TGKK--ILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDS 365
V+ +K I RI+ GLAP++PEDL +LIK+AV +RKHLE++ KD S
Sbjct: 61 PTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHS 118
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 96.3 bits (229), Expect = 2e-19
Identities = 45/109 (41%), Positives = 67/109 (61%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
MGR+H+ G S S P P+W++ +V++ I K K+GL PSQIG LRD H +
Sbjct: 1 MGRLHSHRHGKSHSIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAI 59
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDK 359
R +TGK + +IM G P+LPEDL +++KAV +++HL N+ D+
Sbjct: 60 PLTRPITGKSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDR 108
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 95.5 bits (227), Expect = 3e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 24 AANMGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRD 200
AA GR+H PGKG+S+SAL Y SVPTWLKLT+D+VKEQI+KL KKGLTP QIGV+LRD
Sbjct: 211 AAITGRIHVPGKGLSRSALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 95.5 bits (227), Expect = 3e-19
Identities = 43/109 (39%), Positives = 66/109 (60%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
MGRMH G S S P P+W+ + +++E + K K GLTPSQIG+ LRD H +
Sbjct: 1 MGRMHTHRHGKSHSIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDK 359
++ +T K I I+ L ++PEDL ++KKAV +++HL+ N+ D+
Sbjct: 61 PLIKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDR 109
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 94.7 bits (225), Expect = 5e-19
Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKG-LTPSQIGVMLRDSHG 209
MG+M++ GKGIS + +PYR+ W LT+ ++ + I L K L PS+IG++LRD
Sbjct: 1 MGKMYSKGKGISSTTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKL 60
Query: 210 VAQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 377
V R ++G I +I+R GL P +PEDL+YLIKKA ++ HL + D +++ L
Sbjct: 61 VVDTRNISGMNISKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHL 116
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 91.1 bits (216), Expect = 6e-18
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +3
Query: 33 MGRMHAPGK--GISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSH 206
M R+HA + G S S P R + P W + V+ +I +L K+G +P+ IG++LRD +
Sbjct: 1 MSRLHAHKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQY 60
Query: 207 GVAQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 368
G+ VR GK + + GL PD+P DL YL+K+A + KH+E N +D +K
Sbjct: 61 GIPDVRLYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAK 114
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 83.0 bits (196), Expect = 2e-15
Identities = 41/112 (36%), Positives = 65/112 (58%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M RMH +G S S R P+W++ + D++KE I K+ K+G+T S IG+ LRD + +
Sbjct: 1 MARMHTRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAI 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 368
R V K+ ++++ L D+PEDL LI++ KHL N+ D ++K
Sbjct: 61 PGTRPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNK 112
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 81.8 bits (193), Expect = 4e-15
Identities = 41/112 (36%), Positives = 64/112 (57%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
M RM+A +G S S+ P+ P W A +++ I + K G++ +QIG +LRD H V
Sbjct: 1 MARMYASKRGKSGSSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAV 60
Query: 213 AQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 368
VR V GK+I ++ + PEDL L+++AVA+ +HL N +D +K
Sbjct: 61 PNVRLVLGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNK 112
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 80.2 bits (189), Expect = 1e-14
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +3
Query: 33 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDS--H 206
M RMH +G S S P P W + D ++ ++ +L ++G +PS+IG+ LRD
Sbjct: 1 MARMHTRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQ 60
Query: 207 G--VAQVRFVTGKKILRIMRAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 368
G + V TGKK+ I+ PDLPEDL L+++AV +R H++ N D +K
Sbjct: 61 GTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNK 116
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 70.5 bits (165), Expect = 1e-11
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +3
Query: 270 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 380
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLI 105
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 64.9 bits (151), Expect = 5e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 24 AANMGRMHAPGKGISQSALPYRRSVPTWLKLTADDVK 134
+A +GRMHAPGKG+SQSALPYRRSV WLKL +DDVK
Sbjct: 441 SAIVGRMHAPGKGLSQSALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 0.34
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 93 SVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVR 224
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_UPI00015B5B76 Cluster: PREDICTED: similar to GA18084-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA18084-PA - Nasonia vitripennis
Length = 803
Score = 33.9 bits (74), Expect = 1.0
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 151 SLKICSLTSSAVSFNQVGTLRRYGSA-DWDIPLPGACIRPILAAFYY 14
S+ I +TS+ ++ G LRRYG DWD L G IL++F+Y
Sbjct: 60 SIAIVKMTSNRTMTDEHGELRRYGQEFDWDTKLQGL----ILSSFFY 102
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 33.9 bits (74), Expect = 1.0
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 102 TWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMRAMGLAPD 281
T L++T D K + + K G+ GV+ R +HG A++R T K +LR + L P
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR-RKDDQLPPS 211
Query: 282 LPED 293
+ ED
Sbjct: 212 IRED 215
>UniRef50_Q6CWX5 Cluster: Similar to sp|Q9C2M3 Neurospora crassa
Related to kinesin-like protein KIF1C; n=1;
Kluyveromyces lactis|Rep: Similar to sp|Q9C2M3
Neurospora crassa Related to kinesin-like protein KIF1C
- Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 456
Score = 33.9 bits (74), Expect = 1.0
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +3
Query: 66 SQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 245
S+ +PYR S+ TW+ +KE + K + + L +S ++ +R+ T K
Sbjct: 258 SKHLIPYRDSLLTWV------LKENLGGNSKTCMIACISPIDLEES--LSTLRYATTAKE 309
Query: 246 LRIMRAMG-LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDS 365
+++ M + P++ ED+ ++ A + RK LE + + S
Sbjct: 310 IKLRATMNEIVPNINEDMKAAVEAAASSRKELEMLKSEMSS 350
>UniRef50_A5V7X6 Cluster: TonB-dependent receptor precursor; n=1;
Sphingomonas wittichii RW1|Rep: TonB-dependent receptor
precursor - Sphingomonas wittichii RW1
Length = 818
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 54 GKGISQS-ALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVR 224
G+G++ + YR + PTW + K IF L GL + RD++G+ +R
Sbjct: 708 GEGLNLTFRADYRITGPTWFSTVQNQTKRSIFDLFFPGLGTGEYAKSRRDAYGILDLR 765
>UniRef50_Q58MZ4 Cluster: T4-like baseplate tail tube cap; n=1;
Cyanophage P-SSM2|Rep: T4-like baseplate tail tube cap -
Cyanophage P-SSM2
Length = 386
Score = 33.1 bits (72), Expect = 1.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 163 PFLPSLKICSLTSSAVSFNQVGTLRRYGSADWD 65
PFL S K C+LTS +V++ GT YG+ D
Sbjct: 322 PFLNSFKPCALTSFSVNYTGAGTYASYGTGGDD 354
>UniRef50_Q3A384 Cluster: Predicted PTS family phosphotransferase,
mannose-specific enzyme IIC; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Predicted PTS family
phosphotransferase, mannose-specific enzyme IIC -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 232
Score = 32.7 bits (71), Expect = 2.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 8 GDIVKSRQYGSYART-WQGYIPVGAAVPP 91
GD+ Q G++ W G IP+GAA+PP
Sbjct: 44 GDVATGLQIGAFLELLWLGRIPIGAAIPP 72
>UniRef50_Q8SUV1 Cluster: Putative uncharacterized protein
ECU07_1670; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU07_1670 - Encephalitozoon
cuniculi
Length = 932
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 132 KEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFV-TGKKILRIMR 260
K +I KLG +GL +IG +++ + F+ TGK++LR+ R
Sbjct: 472 KNKIVKLGPEGLETIEIGFSIKEIEADERHLFILTGKRVLRVYR 515
>UniRef50_Q4RIR6 Cluster: Chromosome 7 SCAF15042, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
SCAF15042, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 212
Score = 32.3 bits (70), Expect = 3.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 96 HCGGTAAPTGIYPCQVRAYDPYWRLFTISPS 4
HCGG AP PC A P WR ++SPS
Sbjct: 122 HCGGFRAPPA--PCVTAASCPCWRTASMSPS 150
>UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=1;
Azoarcus sp. EbN1|Rep: Helicase/SNF2 family domain
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 883
Score = 32.3 bits (70), Expect = 3.2
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 135 EQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVT-GKKILRIMRAMGLAPDLPEDLYYLI 308
+++ +L + G T S V LR+ H V + + +K+ IM A+G A D PEDL L+
Sbjct: 563 QRVGRLNRYGQTQSVEVVSLRNPHTVESMIWEKLEEKLGNIMLALGSAMDEPEDLLQLV 621
>UniRef50_A1V9P0 Cluster: ComEC/Rec2-related protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep:
ComEC/Rec2-related protein - Desulfovibrio vulgaris
subsp. vulgaris (strain DP4)
Length = 979
Score = 32.3 bits (70), Expect = 3.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 45 HAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 212
+A G G++ +ALP S P W+ A V + + GL ++ +MLRD H V
Sbjct: 60 YAAGWGVALAALPETPSAPAWVTGKAQRVTGIVDDV--DGLPDGRLRIMLRDVHPV 113
>UniRef50_Q1D6A0 Cluster: Non-ribosomal peptide synthetase; n=7;
Bacteria|Rep: Non-ribosomal peptide synthetase -
Myxococcus xanthus (strain DK 1622)
Length = 11939
Score = 31.9 bits (69), Expect = 4.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 75 ALPYRRSVPTWLKLTADDVKEQIFKL--GKKGLTPSQIGVMLRDSHGVAQVRFVTGKKIL 248
A+ RR + W +D V I L + TP + V+ DS + ++
Sbjct: 4711 AVEQRRLLVEWNDTRSDFVPNTIQALFEAQAAKTPEALAVVAEDSRLTYEALNQRANQLA 4770
Query: 249 RIMRAMGLAPDLPEDLY 299
+R++G+ PD+P LY
Sbjct: 4771 HQLRSLGVGPDVPVGLY 4787
>UniRef50_A4SA99 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 317
Score = 31.5 bits (68), Expect = 5.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 23 SRQYGSYARTWQGYIPVGAAVPPQCPY 103
S +YG A TW+G IP A + P PY
Sbjct: 114 STEYGKTADTWEGAIPEEAPLAPVSPY 140
>UniRef50_A4Q9F4 Cluster: Polyglutamylase; n=2; Euteleostomi|Rep:
Polyglutamylase - Mus musculus (Mouse)
Length = 727
Score = 31.1 bits (67), Expect = 7.3
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 172 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 8
G R F+ + K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 600 GFRTFIRNCKLSSSSLSMAAVDILYIDITRRWNSVTVDQRDSGMCLQAFVEAFFFLA 656
>UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3;
Brucella|Rep: Putative uncharacterized protein -
Brucella suis
Length = 276
Score = 31.1 bits (67), Expect = 7.3
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 96 VPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQV 221
+PTWL L ++ ++L K +TP+ IG+ + + G++++
Sbjct: 149 LPTWLGLRRGKLRPLYYRLIHKEVTPASIGITVFGNDGISRL 190
>UniRef50_A1YGV0 Cluster: Extracellular serine proteinase; n=23;
Enterococcus faecalis|Rep: Extracellular serine
proteinase - Enterococcus faecalis (Streptococcus
faecalis)
Length = 284
Score = 31.1 bits (67), Expect = 7.3
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 374 PEFAVLVLPITFQMFPHGDSLLDQVVQIFR*IRSKTHSSHDTQDLFTSNKSDLCNTMRVP 195
PE ++ P + F D+ + + + ++ T SH+ DLFTSN +DL N +
Sbjct: 163 PELGEILTPFVLKKFESSDTHV--TISGYPGEKNHTQWSHEN-DLFTSNFTDLENPLLFY 219
Query: 194 EHDTDLGRS 168
+ DT G+S
Sbjct: 220 DIDTTGGQS 228
>UniRef50_A0E269 Cluster: Chromosome undetermined scaffold_74, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_74,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 655
Score = 31.1 bits (67), Expect = 7.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 51 PGKGISQSALPYRRSVPTWLKLTADDVKEQI 143
P KG+SQS P+ +VPT L L+ K I
Sbjct: 146 PSKGVSQSECPHSNNVPTSLVLSQGSTKPDI 176
>UniRef50_UPI000058808D Cluster: PREDICTED: similar to trnS; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
trnS - Strongylocentrotus purpuratus
Length = 1776
Score = 30.7 bits (66), Expect = 9.6
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 326 HGDSLLDQVVQIFR*IRSKTHSSHDTQDLFTS-NKSDLCNTMRVPEHDTDLGRSKT 162
H D+ + VQ + + HS QD + D+C++++ EHD DL S T
Sbjct: 525 HTDNDVCSTVQNTKCLEDSVHSDTSDQDTRSPCTDDDVCSSVQNTEHDEDLSNSVT 580
>UniRef50_Q6D8R0 Cluster: Putative membrane protein; n=1;
Pectobacterium atrosepticum|Rep: Putative membrane
protein - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 458
Score = 30.7 bits (66), Expect = 9.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 334 CFLMATAFL-IR*YKSSGRSGARPIALMIRRIFLPVTNLTCAT 209
CF +AT ++ + K S R+GA +A I +FL LT AT
Sbjct: 173 CFFLATKYIPVATTKESSRTGAYEVAFPILMLFLVAFMLTTAT 215
>UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 739
Score = 30.7 bits (66), Expect = 9.6
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 206 MRVPEHDTDLGRSKTLFAKFEDLF--LNIISG*FQPGRDTAAVRQRRLGYTLARCVHTTH 33
MRV ++ T R L+ K E LF N++ +P + A +R+RR G A +
Sbjct: 576 MRVWDYQTKFKRVLQLYTKIEILFPERNVLRVMSKPDKFLAELRERRSGLEKALIFDSLD 635
Query: 32 IGGFLLYRPR 3
LY+PR
Sbjct: 636 FLTLWLYQPR 645
>UniRef50_A7A7T0 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 910
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 63 ISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKK 242
+ +S L YR S +++KE ++ G+TP Q G+ +R + VR K
Sbjct: 580 LPESVLDYRYSCSI-----VEELKESASRMKHLGMTPKQFGLAIRKNPNKG-VRITNASK 633
Query: 243 ILRIMRAMGLAP-DLPEDLYYLIKKAVAMRKHLERNRKDK 359
+ + +G D+ ++ IK V M++ RN+ D+
Sbjct: 634 MRNAVEGIGYQEFDMAGEIIESIKLDVDMKR---RNQNDE 670
>UniRef50_A0P380 Cluster: Sensor protein; n=1; Stappia aggregata IAM
12614|Rep: Sensor protein - Stappia aggregata IAM 12614
Length = 628
Score = 30.7 bits (66), Expect = 9.6
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = +3
Query: 102 TWLKLTADDVKEQIFKLGKKGL-TPSQIGVMLRDSH--GVAQVRFVTG--KKILRIMRAM 266
T L + + D + F LG + + P+ G M H + Q+R ++G K+I+R+ R
Sbjct: 68 TDLHILSHDDRLLDFALGNEDMYQPTLRGFMSFTEHKSSITQLRIISGEGKEIIRVNRKN 127
Query: 267 GLAPDLPED 293
GLA ++P++
Sbjct: 128 GLAHEVPQE 136
>UniRef50_A0LD47 Cluster: Phosphonate ABC transporter, periplasmic
phosphonate-binding protein precursor; n=1;
Magnetococcus sp. MC-1|Rep: Phosphonate ABC transporter,
periplasmic phosphonate-binding protein precursor -
Magnetococcus sp. (strain MC-1)
Length = 284
Score = 30.7 bits (66), Expect = 9.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 226 NLTCATP*ESLSMTPIWEGVRPFLPSLKICSLTSSAVSF 110
NL ATP SL+ TP+ GV PFLP+ ++ ++F
Sbjct: 15 NLLLATP--SLAQTPLIFGVHPFLPATELHKRFQPLITF 51
>UniRef50_A7PK49 Cluster: Chromosome chr15 scaffold_19, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_19, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 602
Score = 30.7 bits (66), Expect = 9.6
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 60 GISQSALPYRRSVPTWLKLTADDVKEQIFK-LGKKGLTPSQIGVMLRDSHGVAQVRFVTG 236
G S +A+ Y + ++K+ D +++ + KKG+ P I + S R G
Sbjct: 79 GFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDG 138
Query: 237 KKILRIMRAMGLAPD 281
++L+ + +GL PD
Sbjct: 139 DRLLKDISVLGLLPD 153
>UniRef50_A0BKW3 Cluster: Chromosome undetermined scaffold_113,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_113,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 473
Score = 30.7 bits (66), Expect = 9.6
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 210 VAQVRFVTGKKILRIMRAMGLAPDLPEDL----YYLIKKAVAMRKHLERNRKDKDSKFR 374
+A +RF +G + R M L +P+D + + +KA RK + + DK+ KFR
Sbjct: 40 LADLRFQSGSNDISAKRIMNLKIKIPKDKNTEGHKIKRKASLKRKSISVQQDDKEKKFR 98
>UniRef50_Q2FKW4 Cluster: Sensor protein; n=1; Methanospirillum
hungatei JF-1|Rep: Sensor protein - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 841
Score = 30.7 bits (66), Expect = 9.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 190 MTPIWEGVRPFLPSLKICSLTSSAVSFNQVGTLRRYGSADWDI 62
++ + EG+ PF+ +IC++ + VG L RY D D+
Sbjct: 445 LSRVREGIDPFIAEYQICTIHGEKIWVECVGKLIRYEGQDADL 487
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,961,792
Number of Sequences: 1657284
Number of extensions: 8206125
Number of successful extensions: 23378
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 22830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23367
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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