Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P05
(270 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 105 1e-24
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 105 1e-24
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 93 6e-21
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 92 1e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 70 7e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 50 4e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 40 8e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 27 0.46
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 25 1.9
SPBC428.03c |pho4||thiamine-repressible acid phosphatase Pho4|Sc... 25 2.5
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 2.5
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 24 3.2
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 4.3
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 24 4.3
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 4.3
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 23 7.5
SPAC824.08 |gda1|gdp1|guanosine-diphosphatase Gda1|Schizosacchar... 23 7.5
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 23 7.5
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 23 9.9
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 23 9.9
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 105 bits (251), Expect = 1e-24
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +2
Query: 101 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAM 268
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAK+QVAM
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 59
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 105 bits (251), Expect = 1e-24
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +2
Query: 101 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAM 268
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAK+QVAM
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 59
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 93.1 bits (221), Expect = 6e-21
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +2
Query: 101 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAM 268
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAK+Q AM
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAM 63
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 91.9 bits (218), Expect = 1e-20
Identities = 40/52 (76%), Positives = 48/52 (92%)
Frame = +2
Query: 104 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQ 259
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAK+Q
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQ 89
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 69.7 bits (163), Expect = 7e-14
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 NKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKS 256
N+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 257 QVAM 268
Q +
Sbjct: 105 QAVI 108
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 50.4 bits (115), Expect = 4e-08
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +2
Query: 89 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVA 265
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAKS A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.5 bits (88), Expect = 8e-05
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 104 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQV 262
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQL 79
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 27.1 bits (57), Expect = 0.46
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 104 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIG 241
+ ID GT ++ + + G +EI+ R S VAF ER+ G
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFG 71
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.0 bits (52), Expect = 1.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 268 HRNLALGCITDKTLSVGERN 209
H+++ L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
>SPBC428.03c |pho4||thiamine-repressible acid phosphatase
Pho4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 463
Score = 24.6 bits (51), Expect = 2.5
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 267 IATWLLAASPIRRSVSVNATYEGVVLLPWSLAMISTF--PCWNTPT 136
I+ WLLAAS + S +E L IS + P +N PT
Sbjct: 6 ISLWLLAASIVHAGKSQFEAFENEFYFKDHLGTISVYHEPYFNGPT 51
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 2.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 107 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 193
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 24.2 bits (50), Expect = 3.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 166 LNFPMLEHTHTRVGCAQIDTN 104
L+ + EHTH R+ Q+D+N
Sbjct: 375 LDHELYEHTHKRMTQMQVDSN 395
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 4.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 101 AVGIDLGTTYSCVGVFQHGKVEIIAND 181
A+G LG Y+C+ +F + +A +
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKE 454
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 23.8 bits (49), Expect = 4.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 1 ARFNRAPYLLSRPTSCQRL 57
ARFN+A LL+ T+C L
Sbjct: 73 ARFNKARLLLNMATNCDML 91
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.8 bits (49), Expect = 4.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 179 DQGNRTTPSYVAFTDTERLIGDAAKSQVA 265
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 23.0 bits (47), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 92 KAPAVGIDLGTTYSCVGVFQHGKVEII 172
K PA+G D+G T + V + GK E I
Sbjct: 306 KTPAIGFDMGGTSTDVSRYD-GKFEHI 331
>SPAC824.08 |gda1|gdp1|guanosine-diphosphatase
Gda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 556
Score = 23.0 bits (47), Expect = 7.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 50 ND*LSIRYKRNKMAKAPAVGIDLGTTYSCVGVFQ 151
+D S+ Y +K + + ID G+T S V V+Q
Sbjct: 118 SDDCSVAYDNSKPVRQYVLMIDAGSTGSRVHVYQ 151
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +3
Query: 96 HQQLVSI--WAQPTLVWVCSSMG 158
H +VS WA L+W CS G
Sbjct: 314 HDSIVSTMHWASTELLWSCSKDG 336
>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 22.6 bits (46), Expect = 9.9
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -3
Query: 130 VGCAQIDTNCWCFCHF 83
VGC Q W CH+
Sbjct: 200 VGCGQSAAEIWKHCHY 215
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 22.6 bits (46), Expect = 9.9
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = +1
Query: 100 SSWYRSGHNLLLCGCVPAW 156
S W G + +LC P W
Sbjct: 240 SGWTNMGWSFILCFTTPVW 258
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,063,100
Number of Sequences: 5004
Number of extensions: 18414
Number of successful extensions: 66
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 57602552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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