Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P04
         (247 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6UVW9 Cluster: Putative uncharacterized protein precur...    33   1.2  
UniRef50_Q54UV3 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_A0EAU7 Cluster: Chromosome undetermined scaffold_87, wh...    31   3.7  
UniRef50_Q58792 Cluster: Uncharacterized protein MJ1397 precurso...    31   4.9  
UniRef50_Q697H2 Cluster: NADH dehydrogenase subunit 6; n=1; Aleu...    30   8.6  

>UniRef50_A6UVW9 Cluster: Putative uncharacterized protein
           precursor; n=1; Methanococcus aeolicus Nankai-3|Rep:
           Putative uncharacterized protein precursor -
           Methanococcus aeolicus Nankai-3
          Length = 512

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -1

Query: 241 IYLYISLNKIERQTVE*RHIIITNY*YEFTTNITTLYSITIKNTKLLKTSKLYS*ISL 68
           +++ IS NKI +   +  + I  NY Y+   N++      IKNT +L  +  Y  I+L
Sbjct: 86  MFIGISANKINKNEWKVYYNITNNYPYDILVNVSFPDGFVIKNTSVLVPANSYKTITL 143


>UniRef50_Q54UV3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 663

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +2

Query: 164 SIICNYYVSSFNCLSFDFIQTYIQINSQ 247
           S++ N ++SS +CLS + I T+IQI+ Q
Sbjct: 125 SLVENCFISSMDCLSIEVIPTFIQISIQ 152


>UniRef50_A0EAU7 Cluster: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_87,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 424

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = -2

Query: 216 KSKDKQLNEDT**LQIIDTNSQQILQHYIRLQLKIQNY*KHQNYIRKSVFTYTYTKLFTI 37
           K +DK + ++     I++ + Q I Q Y+++QL+IQN  +H+  I +        KLF  
Sbjct: 193 KVRDKVIFKEQQSAAILEQDPQ-IEQQYLKIQLQIQNQERHKKIIDEKY--QADLKLFKQ 249

Query: 36  DINNE 22
           DIN++
Sbjct: 250 DINHK 254


>UniRef50_Q58792 Cluster: Uncharacterized protein MJ1397 precursor;
           n=1; Methanocaldococcus jannaschii|Rep: Uncharacterized
           protein MJ1397 precursor - Methanococcus jannaschii
          Length = 486

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 241 IYLYISLNKIERQTVE*RHIIITNY*YEFTTNITTLYSITIKNTKLLKTSKLYS*ISL 68
           I + IS ++I R      + II NY Y    NI+      IKN  +L  +K Y  I+L
Sbjct: 88  ISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITL 145


>UniRef50_Q697H2 Cluster: NADH dehydrogenase subunit 6; n=1;
           Aleurochiton aceris|Rep: NADH dehydrogenase subunit 6 -
           Aleurochiton aceris
          Length = 143

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 102 NNFVFLIVIE--YNVVIFVVNSYQ*FVIIMCLHSTVCLSILFKLIYK 236
           NN  F IV    YN++ F V SY  F +    +   CL + ++LI K
Sbjct: 88  NNLTFNIVYYEFYNLLKFFVYSYNIFSLFFMFYLLACLVVAYELIKK 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,298,539
Number of Sequences: 1657284
Number of extensions: 2695033
Number of successful extensions: 8149
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8146
length of database: 575,637,011
effective HSP length: 60
effective length of database: 476,199,971
effective search space used: 10000199391
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)