Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P04
         (247 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         21   4.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    21   4.9  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     21   4.9  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     21   4.9  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         21   8.5  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         21   8.5  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         21   8.5  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    21   8.5  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    21   8.5  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 84  YNFDVFNNFVFLIVIEYNVVIFVVNSY 164
           Y  D +NNF     + YN     +N+Y
Sbjct: 208 YPMDYYNNFYTEEYLNYNTEDIGLNAY 234


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 174  VIIMCLHSTVCLSILFKLIY 233
            +I +C+ S+ CL  +F L Y
Sbjct: 1660 MIFICIFSSECLMKIFALRY 1679


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 84  YNFDVFNNFVFLIVIEYNVVIFVVNSY 164
           Y  D +NNF     + YN     +N+Y
Sbjct: 208 YPMDYYNNFYTEEYLNYNTEDIGLNAY 234


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 84  YNFDVFNNFVFLIVIEYNVVIFVVNSY 164
           Y  D +NNF     + YN     +N+Y
Sbjct: 208 YPMDYYNNFYTEEYLNYNTEDIGLNAY 234


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CM*RLIYEYNFDVFN 104
           C   LI+E NFD F+
Sbjct: 40  CSGELIFEDNFDFFD 54


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CM*RLIYEYNFDVFN 104
           C   LI+E NFD F+
Sbjct: 40  CSGELIFEDNFDFFD 54


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CM*RLIYEYNFDVFN 104
           C   LI+E NFD F+
Sbjct: 40  CSGELIFEDNFDFFD 54


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CM*RLIYEYNFDVFN 104
           C   LI+E NFD F+
Sbjct: 58  CSGELIFEDNFDFFD 72


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CM*RLIYEYNFDVFN 104
           C   LI+E NFD F+
Sbjct: 58  CSGELIFEDNFDFFD 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,411
Number of Sequences: 2352
Number of extensions: 2900
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)