Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P03
(163 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 36 0.004
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 36 0.004
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 36 0.004
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 36 0.004
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 36 0.004
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 32 0.063
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 32 0.063
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 32 0.063
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 32 0.063
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 32 0.063
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 32 0.063
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 31 0.11
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 30 0.19
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 30 0.25
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 30 0.25
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 30 0.25
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 30 0.25
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 0.44
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 0.44
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 0.44
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 0.44
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 0.44
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 0.44
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 0.44
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr... 27 1.4
L08970-1|AAA53660.1| 627|Caenorhabditis elegans choline acetylt... 26 3.1
L08969-1|AAA53659.1| 627|Caenorhabditis elegans choline acetylt... 26 3.1
AF036701-3|AAB88370.1| 627|Caenorhabditis elegans Abnormal chol... 26 3.1
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 25 5.5
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 21 RFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
R+S++ +T ++ + D GK IC A N+AG ++ + +++LV P
Sbjct: 3527 RYSISPDGSHITINKAKLSDGGKYICRASNEAGTSDIDLILKILVPP 3573
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEVLVRP 161
D G C A NKAG+++T +VEVLV P
Sbjct: 3190 DGGTYTCIATNKAGESQTTTDVEVLVPP 3217
Score = 31.9 bits (69), Expect = 0.063
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L ++ D G C A+N AG +E ++ V+VLV P
Sbjct: 3915 LDIPHLKKTDVGDYTCQALNAAGTSEASVSVDVLVPP 3951
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 48 LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
+LT + D G +C+A N+AG + A +EVLV P
Sbjct: 4099 MLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVLVSP 4136
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 30 VNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
V+ I L D + G+ C A NKAG++E + VEVL+ P
Sbjct: 2900 VDIIGSTLVIDNPQKEVEGRYTCIAENKAGRSEKDMMVEVLLPP 2943
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
LT V D G+ C N AG+N + VLV P
Sbjct: 2251 LTILNVTENDEGQYSCRVKNDAGENSFDFKATVLVPP 2287
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 15 TSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
T +++ LT + + G C A+N+AG+ +VE+L P
Sbjct: 3718 TDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEILSPP 3766
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L D ++ G+ C A NKAG+ E VE+ P
Sbjct: 3091 LRIDNIKPNQEGRYTCVAENKAGRAEQDTYVEISEPP 3127
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 21 RFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
R+S++ +T ++ + D GK IC A N+AG ++ + +++LV P
Sbjct: 3527 RYSISPDGSHITINKAKLSDGGKYICRASNEAGTSDIDLILKILVPP 3573
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEVLVRP 161
D G C A NKAG+++T +VEVLV P
Sbjct: 3190 DGGTYTCIATNKAGESQTTTDVEVLVPP 3217
Score = 31.9 bits (69), Expect = 0.063
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L ++ D G C A+N AG +E ++ V+VLV P
Sbjct: 3915 LDIPHLKKTDVGDYTCQALNAAGTSEASVSVDVLVPP 3951
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 48 LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
+LT + D G +C+A N+AG + A +EVLV P
Sbjct: 4099 MLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVLVSP 4136
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 30 VNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
V+ I L D + G+ C A NKAG++E + VEVL+ P
Sbjct: 2900 VDIIGSTLVIDNPQKEVEGRYTCIAENKAGRSEKDMMVEVLLPP 2943
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
LT V D G+ C N AG+N + VLV P
Sbjct: 2251 LTILNVTENDEGQYSCRVKNDAGENSFDFKATVLVPP 2287
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 15 TSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
T +++ LT + + G C A+N+AG+ +VE+L P
Sbjct: 3718 TDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEILSPP 3766
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L D ++ G+ C A NKAG+ E VE+ P
Sbjct: 3091 LRIDNIKPNQEGRYTCVAENKAGRAEQDTYVEISEPP 3127
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 21 RFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
R+S++ +T ++ + D GK IC A N+AG ++ + +++LV P
Sbjct: 3527 RYSISPDGSHITINKAKLSDGGKYICRASNEAGTSDIDLILKILVPP 3573
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEVLVRP 161
D G C A NKAG+++T +VEVLV P
Sbjct: 3190 DGGTYTCIATNKAGESQTTTDVEVLVPP 3217
Score = 31.9 bits (69), Expect = 0.063
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L ++ D G C A+N AG +E ++ V+VLV P
Sbjct: 3915 LDIPHLKKTDVGDYTCQALNAAGTSEASVSVDVLVPP 3951
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 48 LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
+LT + D G +C+A N+AG + A +EVLV P
Sbjct: 4099 MLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVLVSP 4136
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 30 VNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
V+ I L D + G+ C A NKAG++E + VEVL+ P
Sbjct: 2900 VDIIGSTLVIDNPQKEVEGRYTCIAENKAGRSEKDMMVEVLLPP 2943
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
LT V D G+ C N AG+N + VLV P
Sbjct: 2251 LTILNVTENDEGQYSCRVKNDAGENSFDFKATVLVPP 2287
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 15 TSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
T +++ LT + + G C A+N+AG+ +VE+L P
Sbjct: 3718 TDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEILSPP 3766
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L D ++ G+ C A NKAG+ E VE+ P
Sbjct: 3091 LRIDNIKPNQEGRYTCVAENKAGRAEQDTYVEISEPP 3127
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 21 RFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
R+S++ +T ++ + D GK IC A N+AG ++ + +++LV P
Sbjct: 3527 RYSISPDGSHITINKAKLSDGGKYICRASNEAGTSDIDLILKILVPP 3573
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEVLVRP 161
D G C A NKAG+++T +VEVLV P
Sbjct: 3190 DGGTYTCIATNKAGESQTTTDVEVLVPP 3217
Score = 31.9 bits (69), Expect = 0.063
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L ++ D G C A+N AG +E ++ V+VLV P
Sbjct: 3915 LDIPHLKKTDVGDYTCQALNAAGTSEASVSVDVLVPP 3951
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 48 LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
+LT + D G +C+A N+AG + A +EVLV P
Sbjct: 4099 MLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVLVSP 4136
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 30 VNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
V+ I L D + G+ C A NKAG++E + VEVL+ P
Sbjct: 2900 VDIIGSTLVIDNPQKEVEGRYTCIAENKAGRSEKDMMVEVLLPP 2943
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
LT V D G+ C N AG+N + VLV P
Sbjct: 2251 LTILNVTENDEGQYSCRVKNDAGENSFDFKATVLVPP 2287
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 15 TSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
T +++ LT + + G C A+N+AG+ +VE+L P
Sbjct: 3718 TDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEILSPP 3766
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L D ++ G+ C A NKAG+ E VE+ P
Sbjct: 3091 LRIDNIKPNQEGRYTCVAENKAGRAEQDTYVEISEPP 3127
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 21 RFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
R+S++ +T ++ + D GK IC A N+AG ++ + +++LV P
Sbjct: 3527 RYSISPDGSHITINKAKLSDGGKYICRASNEAGTSDIDLILKILVPP 3573
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEVLVRP 161
D G C A NKAG+++T +VEVLV P
Sbjct: 3190 DGGTYTCIATNKAGESQTTTDVEVLVPP 3217
Score = 31.9 bits (69), Expect = 0.063
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L ++ D G C A+N AG +E ++ V+VLV P
Sbjct: 3915 LDIPHLKKTDVGDYTCQALNAAGTSEASVSVDVLVPP 3951
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 48 LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
+LT + D G +C+A N+AG + A +EVLV P
Sbjct: 4099 MLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVLVSP 4136
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 30 VNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
V+ I L D + G+ C A NKAG++E + VEVL+ P
Sbjct: 2900 VDIIGSTLVIDNPQKEVEGRYTCIAENKAGRSEKDMMVEVLLPP 2943
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
LT V D G+ C N AG+N + VLV P
Sbjct: 2251 LTILNVTENDEGQYSCRVKNDAGENSFDFKATVLVPP 2287
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 15 TSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
T +++ LT + + G C A+N+AG+ +VE+L P
Sbjct: 3718 TDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEILSPP 3766
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
L D ++ G+ C A NKAG+ E VE+ P
Sbjct: 3091 LRIDNIKPNQEGRYTCVAENKAGRAEQDTYVEISEPP 3127
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.9 bits (69), Expect = 0.063
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEV 149
D+GK C A NKAG++ET E+++
Sbjct: 3648 DFGKYTCQATNKAGKDETVGELKI 3671
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 FSVNEISG--LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
F +E SG LT + D G C A N+AG+ +T + V
Sbjct: 3530 FGKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANMAV 3573
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 31.9 bits (69), Expect = 0.063
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEV 149
D+GK C A NKAG++ET E+++
Sbjct: 3008 DFGKYTCQATNKAGKDETVGELKI 3031
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 FSVNEISG--LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
F+ +E SG LT + D G C A N+AG+ +T + V
Sbjct: 2890 FAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANMAV 2933
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAG 119
LTFD V D G+ C A N+ G
Sbjct: 3235 LTFDNVTQADAGEYRCEAENEYG 3257
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.9 bits (69), Expect = 0.063
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEV 149
D+GK C A NKAG++ET E+++
Sbjct: 3648 DFGKYTCQATNKAGKDETVGELKI 3671
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 FSVNEISG--LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
F+ +E SG LT + D G C A N+AG+ +T + V
Sbjct: 3530 FAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANMAV 3573
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAG 119
LTFD V D G+ C A N+ G
Sbjct: 3875 LTFDNVTQADAGEYRCEAENEYG 3897
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.9 bits (69), Expect = 0.063
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEV 149
D+GK C A NKAG++ET E+++
Sbjct: 3648 DFGKYTCQATNKAGKDETVGELKI 3671
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 FSVNEISG--LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
F+ +E SG LT + D G C A N+AG+ +T + V
Sbjct: 3530 FAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANMAV 3573
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAG 119
LTFD V D G+ C A N+ G
Sbjct: 3875 LTFDNVTQADAGEYRCEAENEYG 3897
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 31.9 bits (69), Expect = 0.063
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEV 149
D+GK C A NKAG++ET E+++
Sbjct: 3008 DFGKYTCQATNKAGKDETVGELKI 3031
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 FSVNEISG--LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
F+ +E SG LT + D G C A N+AG+ +T + V
Sbjct: 2890 FAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANMAV 2933
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAG 119
LTFD V D G+ C A N+ G
Sbjct: 3235 LTFDNVTQADAGEYRCEAENEYG 3257
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.9 bits (69), Expect = 0.063
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 78 DYGKCICNAVNKAGQNETAIEVEV 149
D+GK C A NKAG++ET E+++
Sbjct: 3648 DFGKYTCQATNKAGKDETVGELKI 3671
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 FSVNEISG--LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
F+ +E SG LT + D G C A N+AG+ +T + V
Sbjct: 3530 FAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANMAV 3573
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 51 LTFDRVEAGDYGKCICNAVNKAG 119
LTFD V D G+ C A N+ G
Sbjct: 3875 LTFDNVTQADAGEYRCEAENEYG 3897
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
1 protein.
Length = 1073
Score = 31.1 bits (67), Expect = 0.11
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 33 NEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEV 143
+E LL + V+ DYG+ +C A N G + IE+
Sbjct: 691 DEYEQLLQIESVQESDYGEYVCRATNGNGGDHVVIEL 727
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 30.3 bits (65), Expect = 0.19
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 45 GLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVE 146
G LT DR++ D+G C A N AG + ++ V+
Sbjct: 369 GKLTIDRIKQDDFGLYQCEATNAAGADLASVWVK 402
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 29.9 bits (64), Expect = 0.25
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 9 ATTSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
A + + +V E GLL + + + D G C A N G NE ++ V ++P
Sbjct: 286 ARSDKHNVEE--GLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKP 334
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 29.9 bits (64), Expect = 0.25
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 9 ATTSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
A + + +V E GLL + + + D G C A N G NE ++ V ++P
Sbjct: 259 ARSDKHNVEE--GLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKP 307
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 29.9 bits (64), Expect = 0.25
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 9 ATTSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
A + + +V E GLL + + + D G C A N G NE ++ V ++P
Sbjct: 259 ARSDKHNVEE--GLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKP 307
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 29.9 bits (64), Expect = 0.25
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 9 ATTSRFSVNEISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEVLVRP 161
A + + +V E GLL + + + D G C A N G NE ++ V ++P
Sbjct: 259 ARSDKHNVEE--GLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKP 307
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 6379 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 6424
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 6908 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 6953
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 6589 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 6634
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 6379 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 6424
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 6908 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 6953
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 6589 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 6634
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 SRFSVNEISGLLTFDRVEA--GDYGKCICNAVNKAGQNETAIEVEV 149
SRF + ++G T +A D G+ +C A N AGQ +T + V
Sbjct: 5798 SRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQEQTRATLTV 5843
>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical
protein F59F3.1 protein.
Length = 1227
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 24 FSVNEISG-LLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
++ ++ G +L R D G+ C A N+AG +IEV+V
Sbjct: 715 YTHGDVDGSILRVSRARGEDDGEFHCLATNRAGDKLNSIEVQV 757
>L08970-1|AAA53660.1| 627|Caenorhabditis elegans choline
acetyltransferase protein.
Length = 627
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 120 VQLYLQHCRYTYHSHQLQLYQMLRVQRF 37
+QL +Q Y H H + Y+ V+RF
Sbjct: 433 IQLIMQLAHYKTHGHLVSTYESASVRRF 460
>L08969-1|AAA53659.1| 627|Caenorhabditis elegans choline
acetyltransferase protein.
Length = 627
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 120 VQLYLQHCRYTYHSHQLQLYQMLRVQRF 37
+QL +Q Y H H + Y+ V+RF
Sbjct: 433 IQLIMQLAHYKTHGHLVSTYESASVRRF 460
>AF036701-3|AAB88370.1| 627|Caenorhabditis elegans Abnormal choline
acetyltransferaseprotein 1, isoform b protein.
Length = 627
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 120 VQLYLQHCRYTYHSHQLQLYQMLRVQRF 37
+QL +Q Y H H + Y+ V+RF
Sbjct: 433 IQLIMQLAHYKTHGHLVSTYESASVRRF 460
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 39 ISGLLTFDRVEAGDYGKCICNAVNKAGQNETAIEVEV 149
I L + E D G C+A N+AG IEV+V
Sbjct: 729 IGNALHVSKAEKRDNGIFWCSATNRAGTTIDYIEVKV 765
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,848,802
Number of Sequences: 27780
Number of extensions: 34752
Number of successful extensions: 275
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 34
effective length of database: 11,795,678
effective search space used: 224117882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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