Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P03
         (163 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   0.79 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    19   5.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   5.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    19   5.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    18   9.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 0.79
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 154 TNTSTSIAVSFCPALFTALQIHLP*SPASTLSNVKSPEIS 35
           ++T+ ++ +S CP+    LQ+ +  S      + KSP  S
Sbjct: 846 SSTAATLVLSGCPSNMMELQVDIADSQQPLNLSKKSPSPS 885


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 163 LGLTNTSTSIAVSFC 119
           +GL NT T    +FC
Sbjct: 31  IGLMNTMTHTTNAFC 45


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 163 LGLTNTSTSIAVSFC 119
           +GL NT T    +FC
Sbjct: 30  IGLMNTMTHTTNAFC 44


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 114 LYLQHCRYTYHSHQLQLYQMLRV 46
           L +QH     +SH +  + ML++
Sbjct: 66  LSIQHYNVDEYSHTVDFHVMLKL 88


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 57  FDRVEAGDYGKCICN 101
           FD + AG+  K +C+
Sbjct: 27  FDSLHAGNAEKTLCS 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,934
Number of Sequences: 438
Number of extensions: 470
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used:  2637780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)