Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P02
(181 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 83 2e-15
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 77 1e-13
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 75 4e-13
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 72 2e-12
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 71 4e-12
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 67 8e-11
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 63 1e-09
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 61 5e-09
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 59 2e-08
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 59 2e-08
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 57 9e-08
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 48 4e-05
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 45 3e-04
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 44 5e-04
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 43 0.001
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 39 0.025
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 36 0.23
UniRef50_Q4TAX5 Cluster: Chromosome undetermined SCAF7240, whole... 33 0.94
UniRef50_Q30U01 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 32 2.2
UniRef50_Q0UWC0 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 2.9
UniRef50_A3TPU7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q47NA8 Cluster: Putative uncharacterized protein precur... 30 8.8
UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein; ... 30 8.8
UniRef50_P39042 Cluster: D-alanyl-D-alanine carboxypeptidase pre... 30 8.8
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 82.6 bits (195), Expect = 2e-15
Identities = 37/55 (67%), Positives = 48/55 (87%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
L + QVYDSG++FAP+ILDI +DL ++F++G+ANVAA+SL IGYPTVAS PHSI
Sbjct: 187 LKIVQVYDSGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSI 241
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = +3
Query: 15 VKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
++QVY G+IF+P ILDIKPEDLR KF GVAN+A +SL IGYPT+AS PH+I
Sbjct: 765 IEQVY--GSIFSPDILDIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNI 815
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 74.5 bits (175), Expect = 4e-13
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
LV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSI 241
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 72.1 bits (169), Expect = 2e-12
Identities = 28/55 (50%), Positives = 45/55 (81%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
L+++QVYD+G++++P +LDI + L ++FL GV N+A++ L IGYPT+AS PH+I
Sbjct: 190 LIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTI 244
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 71.3 bits (167), Expect = 4e-12
Identities = 31/53 (58%), Positives = 43/53 (81%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 167
LVV+ VYD+G++F P +L++ +DL EKF AGV+ + ALSL+I YPTVA+APH
Sbjct: 190 LVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPH 242
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 66.9 bits (156), Expect = 8e-11
Identities = 26/53 (49%), Positives = 43/53 (81%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 167
LVV+ VYD+G++F+P +LD+ + L EKF +G++ V +L+L++ YPT+A+APH
Sbjct: 189 LVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 63.3 bits (147), Expect = 1e-09
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
L VK VYD+G++++ +L + + L KF+ GV N+AA+SL++G PT ASAPHSI
Sbjct: 197 LKVKNVYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSI 251
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 60.9 bits (141), Expect = 5e-09
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3
Query: 18 KQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
K +YD+G ++P+I + EDL KF G+ N+AA+SL IGYPTVAS PHS+
Sbjct: 189 KIIYDAGACYSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSV 237
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 58.8 bits (136), Expect = 2e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 6 RLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
+L V V+D+G ++ P +LDI E + E + ++NVA++SL G PT ASAPHSI
Sbjct: 204 KLSVAHVFDNGNVYGPGVLDITSESIIESYKRVISNVASVSLESGIPTRASAPHSI 259
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 58.8 bits (136), Expect = 2e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
L ++ +YD G ++ P+IL I E L EKF G+ NV L+L++GYP ASAPH +
Sbjct: 189 LKIEALYDHGNMYDPSILAITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLV 243
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 56.8 bits (131), Expect = 9e-08
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +3
Query: 15 VKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 167
V+ VYD G I+ +LDI ED+ EKF GV+NVAALS + G T AS PH
Sbjct: 189 VRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPH 239
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 48.0 bits (109), Expect = 4e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 15 VKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIRE 179
V+ V+D G +F L I + + + L G++NVAALSL G PT A+ PH I +
Sbjct: 196 VQSVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMD 250
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 12 VVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 167
V+ VYD+G ++ LD+ D+ +KF GV A+SL+ PT A+ PH
Sbjct: 195 VIDVVYDNGIVYDAKALDLTESDIVKKFQEGVQAATAISLAANLPTEAACPH 246
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +3
Query: 6 RLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIR 176
++ + Q+Y+ G I+ +++DI ED+ ++ VAA SL G T AS P+++R
Sbjct: 208 KMTMHQIYEDGVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVR 264
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 27 YDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIR 176
YD+G I +L I P + + F +AA+SL+ GY T S PH I+
Sbjct: 211 YDNGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQ 260
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 105 VANVAALSLSIGYPTVASAPHSI 173
V NVA++ L IGYPTVAS PHSI
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSI 23
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
L ++ V+ G +F P L+I ++ R + A+ LS++ YPT +AP I
Sbjct: 191 LDLRGVFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLI 245
>UniRef50_Q4TAX5 Cluster: Chromosome undetermined SCAF7240, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7240,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 578
Score = 33.5 bits (73), Expect = 0.94
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 14 CQTGVRLRYHLRAGNSRHQAGGPSREVPCWSGQRGRALVVHRVPDGRV 157
C GV+ R+ R NSR Q G P + W G R ++ PDG++
Sbjct: 322 CSAGVQDRWFWRLRNSRVQEGYPMQIHHFWKGLPARIDAAYQRPDGKL 369
>UniRef50_Q30U01 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 325
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -1
Query: 160 ADATVGYPMDNESAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTTSL 5
A + Y ++NE + L +F+ G +S I GAK++P+ ++T +
Sbjct: 154 ATLNIDYKLNNEILSRLENDISSFTSMQEGKLSLILGAKLIPKIAQAISTKI 205
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 9 LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 158
L ++ YD GTI+ P +L + + N LS++ YPT A+
Sbjct: 190 LDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGAT 239
>UniRef50_Q0UWC0 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 156
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -1
Query: 163 GADATVGYPMDNESAATLATPARNFSR--RSSGLMSRIAG-AKMVPESYTCLTTSLV 2
G DATV YP +AA +A RN R + + +R+ G AK++ + LT ++V
Sbjct: 13 GQDATVRYPSTGRTAADIARVGRNTHRLLAQNSVANRVLGHAKLLSMMHIPLTQAIV 69
>UniRef50_A3TPU7 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 219
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 QTGVRLRYH-LRAGNSRHQAGGPSREVPCWSGQRGRAL 127
Q GV L H +R RH G SRE P +G+R L
Sbjct: 2 QVGVALEVHPVRRARDRHNDGMTSRETPAATGRRAELL 39
>UniRef50_Q47NA8 Cluster: Putative uncharacterized protein
precursor; n=4; Bacteria|Rep: Putative uncharacterized
protein precursor - Thermobifida fusca (strain YX)
Length = 307
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 72 PEDLREKFLAGVANVAALSLSIGYPTVASAPHSIR 176
PEDLRE+ + G A AL +G AS P R
Sbjct: 223 PEDLRERAMLGDAGANALGALLGLAAAASCPRWAR 257
>UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein;
n=4; Rhodobacteraceae|Rep: Secretion protein HlyD family
protein - Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9)
Length = 396
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 42 IFAPAILDI--KPEDLREKFLAGVANVAALSLSIGYP 146
I +PA+L I +PEDL +F AG VA +L +G P
Sbjct: 241 ILSPAMLIIPDRPEDLPLRFTAGFNQVARSTLYVGMP 277
>UniRef50_P39042 Cluster: D-alanyl-D-alanine carboxypeptidase
precursor; n=3; Streptomyces|Rep: D-alanyl-D-alanine
carboxypeptidase precursor - Streptomyces sp. (strain
K15)
Length = 291
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1
Query: 154 ATVGYPMDNESAATLATPARNFSRRSSGLMSRIAGAKMV 38
A GY M+N + TL T A + +RRS+G ++I AK+V
Sbjct: 37 AVGGYAMNNGTGTTLYTKAAD-TRRSTGSTTKIMTAKVV 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,971,387
Number of Sequences: 1657284
Number of extensions: 2815054
Number of successful extensions: 10465
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10463
length of database: 575,637,011
effective HSP length: 39
effective length of database: 511,002,935
effective search space used: 10220058700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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