BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P02
(181 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 27 0.080
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 0.24
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 23 0.98
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 23 1.7
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 22 3.0
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 22 3.0
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 21 4.0
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 21 5.2
Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein. 21 6.9
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 21 6.9
Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related prot... 21 6.9
AY745232-1|AAU93511.1| 75|Anopheles gambiae SOD3A protein. 21 6.9
Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein. 20 9.1
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 20 9.1
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 20 9.1
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 27.1 bits (57), Expect = 0.080
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 163 GADATVGYPMDNESAATLATPA 98
GA ATV PMD + A A PA
Sbjct: 250 GAPATVSTPMDKDDPAAAAAPA 271
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 25.4 bits (53), Expect = 0.24
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 8 ACCQTGVRLRYHLRAGNSRHQAGGPSREVPC 100
A C R + LR G+ H+A G + EV C
Sbjct: 477 ATCTGEDRSKRCLRCGDQTHKASGCTNEVKC 507
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 23.4 bits (48), Expect = 0.98
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 92 VPCWSGQRGRALVVHRVPDGRVCA 163
+P WS Q + + V+R+ + +CA
Sbjct: 348 IPIWSNQECQEVYVNRIYNTTLCA 371
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 148 VGYPMDNESAATLATPA 98
+GYP D +A T+AT A
Sbjct: 646 MGYPFDRRTADTVATLA 662
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 95 ELLAKVLRLDVENCRREDGTGVVHLFDNK 9
E L +LRLD + C R + H+ NK
Sbjct: 231 EFLKSILRLDEDQCARR--MAMKHIQANK 257
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 115 WPRSRCPSGTRRSR 156
WP R P RRSR
Sbjct: 268 WPSCRSPPARRRSR 281
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 66 CRELPARRWYRSRTP 22
CR PARR RS P
Sbjct: 271 CRSPPARRRSRSTRP 285
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 46 KMVPESYTCLTTSL 5
K +PESY LTT+L
Sbjct: 146 KSMPESYDHLTTTL 159
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 21.0 bits (42), Expect = 5.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 54 AILDIKPEDLREKFLAGVANVAALSLSIGY 143
++LD K E+ RE+F A + + S GY
Sbjct: 183 SVLDEKAEEHREEFTALLRELKNAFRSDGY 212
>Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 44 LRAGNSRHQAGG 79
+R G+SRH +GG
Sbjct: 101 VRLGSSRHASGG 112
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 44 LRAGNSRHQAGG 79
+R G+SRH +GG
Sbjct: 101 VRLGSSRHASGG 112
>Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related
protease protein.
Length = 273
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 11 CCQTGVRLRYHLRAGNSRHQAGG 79
C +++ +R G+S H AGG
Sbjct: 88 CIDLYSQVKPTVRVGSSEHAAGG 110
>AY745232-1|AAU93511.1| 75|Anopheles gambiae SOD3A protein.
Length = 75
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 116 GRALVVHRVPD 148
GR+LVVH PD
Sbjct: 35 GRSLVVHADPD 45
>Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 20.2 bits (40), Expect = 9.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 44 LRAGNSRHQAGG 79
+R G SRH +GG
Sbjct: 100 VRLGTSRHASGG 111
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 23 GVRLRYHLRAGNSRHQAG 76
GVR H R G +R +AG
Sbjct: 428 GVRYLLHARYGPARGRAG 445
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 1 ARGLLSNRCTTPVP 42
AR LLS+ TTP P
Sbjct: 207 ARNLLSSVSTTPSP 220
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,976
Number of Sequences: 2352
Number of extensions: 3726
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used: 9966663
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -