Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_P02
         (181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...    76   4e-15
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    27   1.3  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    27   2.3  
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z78059-4|CAB01487.2|  995|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U23514-1|AAC46543.1|  817|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.     25   9.4  
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.     25   9.4  
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    25   9.4  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score = 75.8 bits (178), Expect = 4e-15
 Identities = 31/55 (56%), Positives = 46/55 (83%)
 Frame = +3

Query: 9   LVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSI 173
           LVV+QVYD GT++ P +LD+  E+LR++FL+GV NVA++SL++ YPT+AS  HS+
Sbjct: 187 LVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSL 241


>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
           protein ZK593.5 protein.
          Length = 1326

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 133 DNESAATLATPARNFSRRSSGLMSRIAGAKMVPES 29
           D    + L  PA +  R+ S +MSR AG+K  P S
Sbjct: 72  DASKRSGLKAPAASAIRKDSSVMSRSAGSKASPGS 106


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 8   ACCQTGVRLRYHLRAGNSRHQAGG-PSREVPCWSG 109
           A C  GVR R+    G S    GG P +E  C++G
Sbjct: 308 ASCGQGVRRRHVACVGGSDCDEGGRPRQETTCYAG 342


>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
           protein C34B4.1b protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 124 SRCPSGTRRSRLRLIPS 174
           SRC  GT  SR  LIPS
Sbjct: 333 SRCSGGTPTSRTSLIPS 349


>Z78059-4|CAB01487.2|  995|Caenorhabditis elegans Hypothetical
           protein C34B4.1a protein.
          Length = 995

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 124 SRCPSGTRRSRLRLIPS 174
           SRC  GT  SR  LIPS
Sbjct: 229 SRCSGGTPTSRTSLIPS 245


>U23514-1|AAC46543.1|  817|Caenorhabditis elegans Hypothetical
           protein F48E8.6 protein.
          Length = 817

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 154 ATVGYPMDNESAATLATPARNFSRRS 77
           A +G+P+D  ++  L+T  R +  +S
Sbjct: 562 ARIGFPLDGRTSGLLSTSLRKYQGKS 587


>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
          Length = 1045

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 124 SRCPSGTRRSRLRLIPS 174
           SRC  GT  SR  LIPS
Sbjct: 279 SRCSGGTPTSRTSLIPS 295


>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 124 SRCPSGTRRSRLRLIPS 174
           SRC  GT  SR  LIPS
Sbjct: 333 SRCSGGTPTSRTSLIPS 349


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 56  NSRHQAGGPSREVPCWSGQRGRALVVHRVPDGRVCASFHP 175
           +S   A  P   +P   G   +  V+H  P G V ASF P
Sbjct: 37  SSEETAVVPEPVMPPRKGSVAQTSVIHYSPPGTVRASFPP 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,038,868
Number of Sequences: 27780
Number of extensions: 60186
Number of successful extensions: 222
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)