Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_P02
(181 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 20 2.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 20 2.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 20 2.4
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 20 2.4
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 20 2.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 20 2.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 3.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 5.5
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 19 5.5
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 19 7.2
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 19 7.2
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 5 EACCQTGVRLRYHLRAGNSRH 67
+ACC+T + AG S+H
Sbjct: 56 DACCRTHDMCPDVMSAGESKH 76
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 57 ILDIKPEDLREKFLAGV 107
++ KP+ R K LAG+
Sbjct: 266 LIQSKPQHARRKVLAGI 282
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 5 EACCQTGVRLRYHLRAGNSRH 67
+ACC+T + AG S+H
Sbjct: 61 DACCRTHDMCPDVMSAGESKH 81
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 53 RREDGTGVVHLFDNKP 6
R EDG ++H + ++P
Sbjct: 125 RPEDGALILHYYSDRP 140
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 5 EACCQTGVRLRYHLRAGNSRH 67
+ACC+T + AG S+H
Sbjct: 61 DACCRTHDMCPDVMSAGESKH 81
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 53 RREDGTGVVHLFDNKP 6
R EDG ++H + ++P
Sbjct: 125 RPEDGALILHYYSDRP 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 337 SSKSLLANVLDID 349
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 337 SSKSLLANVLDID 349
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 337 SSKSLLANVLDID 349
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 337 SSKSLLANVLDID 349
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 337 SSKSLLANVLDID 349
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 337 SSKSLLANVLDID 349
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 118 ATLATPARNFSRRSSGLMSRIAGAKMVPE 32
AT P+RNF+ G M + +PE
Sbjct: 348 ATREHPSRNFTMSEDG-MIEVIPLSAIPE 375
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 405 SSKSLLANVLDID 417
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL +D
Sbjct: 405 SSKSLLANVLDID 417
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.0 bits (37), Expect = 5.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 104 SSKELLAKVLRLD 66
SSK LLA VL L+
Sbjct: 382 SSKSLLANVLDLE 394
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 112 LATPARNFSRRSSGLMSRIA 53
LAT R+FS S ++ I+
Sbjct: 203 LATDERSFSEHDSVMLGEIS 222
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 148 VGYPMDNESAATLATPAR 95
+GYP D + A + T A+
Sbjct: 641 MGYPFDRQPRAGVETLAQ 658
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 8 ACCQTGVRLRY 40
ACC VR RY
Sbjct: 407 ACCPGRVRRRY 417
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,497
Number of Sequences: 438
Number of extensions: 800
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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