Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O22
(338 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 84 5e-18
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 44 6e-06
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 44 8e-06
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 42 3e-05
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 41 6e-05
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 40 1e-04
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 40 1e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 39 2e-04
SPBC428.12c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 39 2e-04
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 37 7e-04
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 36 0.001
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 35 0.003
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 34 0.005
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 34 0.007
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 28 0.34
SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 0.45
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 0.59
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 1.0
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 1.4
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 25 2.4
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 3.2
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 25 3.2
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 25 3.2
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 25 4.2
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 25 4.2
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 4.2
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 24 5.5
SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr 1||... 24 7.3
SPCC1840.07c |||phosphoprotein phosphatase |Schizosaccharomyces ... 23 9.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 23 9.6
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 23 9.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 23 9.6
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 84.2 bits (199), Expect = 5e-18
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = +2
Query: 173 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 334
ASLYVG+L +TEAMLFE F+S GPV SIRVCRD +TRRSLGYAYVNF D
Sbjct: 80 ASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMED 133
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 44.0 bits (99), Expect = 6e-06
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 167 PMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 334
P ++++ L D E+ + +F+ GP+ IRV R+ +T +S+GYA+V F++ D
Sbjct: 98 PYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERD 153
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 43.6 bits (98), Expect = 8e-06
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +2
Query: 173 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 334
A++Y+G+L +T+++LFE AGPV++I + RD + G+ + F D
Sbjct: 11 ATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQD 64
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 41.5 bits (93), Expect = 3e-05
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 176 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 319
+++V L + +T L++ F AGPV ++ RD I+ RS G AYV F
Sbjct: 241 TVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEF 288
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 40.7 bits (91), Expect = 6e-05
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +2
Query: 164 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 337
Y +L++G+L +TEA + + +++ G + +++ R+ T + GY +V F P +A
Sbjct: 90 YQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEA 147
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 39.5 bits (88), Expect = 1e-04
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +2
Query: 140 KMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 319
K G N L+VG+L D + L F AG V S+R+ D + R GYA+V F
Sbjct: 81 KRQKGKNNDRKVILFVGNLPKDSSVETLQLHFKRAGQVPSVRIPTDKTSGRQKGYAFVEF 140
Query: 320 QQP 328
P
Sbjct: 141 INP 143
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 39.5 bits (88), Expect = 1e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 158 PNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 322
P+ P + +VG+L D+TE L + F V SIR+ D +T RS G+ YV F+
Sbjct: 89 PSEPPFTAHVGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRGFGYVEFE 141
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 39.1 bits (87), Expect = 2e-04
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 149 PGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQP 328
P + +++VG L ++ + L ++F G ++ RV D + RS GY YV+F+ P
Sbjct: 255 PSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETP 314
Query: 329 ADA 337
A
Sbjct: 315 EAA 317
Score = 34.3 bits (75), Expect = 0.005
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 167 PMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 319
P +++VG+L + TE L F G + SIR+ D + R G+ YV F
Sbjct: 364 PSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTF 414
>SPBC428.12c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 116
Score = 39.1 bits (87), Expect = 2e-04
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 173 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCR-DMITRRSLGYAYVNFQQPADA 337
A+++VG+L +TE++L+ F G ++S+ + R + RS YA+V F +P DA
Sbjct: 6 ATVHVGNLAPSVTESLLYNAFIPFGEIISVALHRKEKAVDRS--YAFVEFDEPEDA 59
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 37.1 bits (82), Expect = 7e-04
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 167 PMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 337
P +YVG++ ++ E + + F +GPV S ++ D + + GY + + PA A
Sbjct: 3 PSCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATA 59
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 36.3 bits (80), Expect = 0.001
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 179 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 322
LYVG L E + FS GPVL +R+ R+ T S YA++ F+
Sbjct: 107 LYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFE 154
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 35.1 bits (77), Expect = 0.003
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 176 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 334
+++V +L + TE L+ F GP+ ++ +D T RSLG ++ F+ D
Sbjct: 278 TVFVRNLLFECTEQELYNHFRQFGPLAYAKLVKDPATDRSLGRGFIKFRYEKD 330
Score = 27.1 bits (57), Expect = 0.78
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 173 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 337
++L+V +L + L FS GP+ V + T + GY +V F DA
Sbjct: 5 STLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDA 59
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 34.3 bits (75), Expect = 0.005
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 179 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 322
++VG+L + E L+ F G + +R+ RD T G+AY+ F+
Sbjct: 272 VFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFK 319
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 33.9 bits (74), Expect = 0.007
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 179 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 319
++VG++ D++E + E F+ GPV + ++ D T GY + F
Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEF 55
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 0.34
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 179 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSL-GYAYVNFQQPAD 334
+YVG L S I + L +FS G V ++ + ++ +AY+NF+ D
Sbjct: 7 IYVGGLSSSIESSDLESRFSRFGSVSNLEIINKSTPVGTIQRFAYLNFRTDED 59
>SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 27.9 bits (59), Expect = 0.45
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 47 SKECYSHLEKVKFFIAHILLMST*NCNSKIFKMNP 151
SK Y H+ FF H+LL S+ N K F + P
Sbjct: 240 SKLPYFHILDKSFFSPHLLLQSSENQACKFFNIGP 274
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 27.5 bits (58), Expect = 0.59
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 179 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 319
+ V +H + TE + + F+ GPV ++ + D T GYA + +
Sbjct: 12 IIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEY 58
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 26.6 bits (56), Expect = 1.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 167 PMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRV 268
P +L+VG+L S ++ + FS+ G V SIR+
Sbjct: 585 PTHALWVGNLPSGVSATTVATTFSAYGTVSSIRM 618
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 1.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 149 PGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSI 262
PG +++YVG++ S +++ + + FS G V SI
Sbjct: 9 PGQYEDESSTIYVGNIDSRLSDEEIIKHFSKYGQVESI 46
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 297 SDLRVIISRQTRIERTGPAEENFSNNMASVMSECKSPT 184
S L S++ +I T P E+++ M S+++ C +PT
Sbjct: 239 SGLTFYDSKREKICFTFPGEKHYMTVMGSILALCYTPT 276
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 25.0 bits (52), Expect = 3.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 176 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDM 280
SLYV D S E+ LF KF + G LSI D+
Sbjct: 895 SLYVDDGVSIQQESTLFVKFVANGDSLSIESYGDL 929
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 25.0 bits (52), Expect = 3.2
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +2
Query: 164 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 334
Y LYV ++ + E + F G V S+R+ + + GY + Q A+
Sbjct: 754 YEGRELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAE 810
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 338 QHQQAVENLHKRSLVIYELS 279
+ Q+ +ENLHK S+ I +LS
Sbjct: 212 EEQKMIENLHKHSVQIDDLS 231
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 24.6 bits (51), Expect = 4.2
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 275 DMITRRSLGYAYVNFQQP 328
D + + ++GYA++NF +P
Sbjct: 633 DFVNKCNVGYAFINFIEP 650
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 24.6 bits (51), Expect = 4.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 176 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 337
++++G+L + ITE + E GP+ I++ +T R++ A+V+F A A
Sbjct: 207 NVFLGNLPNGITEDEIREDLEPFGPIDQIKI----VTERNI--AFVHFLNIAAA 254
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 24.6 bits (51), Expect = 4.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 188 GDLHSDITEAMLFEKFSSAGPVLSIRV-CRDMITRRS 295
G H+++ LF+K +A PVL R+ +D RRS
Sbjct: 610 GKEHANLALDTLFKKLPTAAPVLLKRIKTKDQEWRRS 646
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 146 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSS 241
NP N P ++YVG+L +E L FS+
Sbjct: 417 NPADQNPPCNTIYVGNLPPSTSEEELKVLFST 448
>SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 467
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 248 PVLSIRVCRDMITRRSLGYAYVNF 319
P+LS+ CR+M + YA V F
Sbjct: 426 PMLSMHSCREMCGSKDFEYAVVLF 449
>SPCC1840.07c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 332
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 164 YPMASLYVGDLHSDITEAMLFEKFSSAGPV 253
YP +GD+H D A+ + S+AG V
Sbjct: 55 YPTVVYAIGDIHGDFPNAL--DVLSAAGVV 82
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 267 TRIERTGPAEENFSNNMASVMSECKSPT 184
TRI + + +F N + ++++ C SPT
Sbjct: 530 TRISPSTLGDTSFPNGIFTLLTHCYSPT 557
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 62 SHLEKVKFFIAHILLMST*NCNSKIFKMNPGPPN 163
++L +FF + + +S+ N S +FK+N N
Sbjct: 355 TYLTAAQFFKSMLQFLSSKNLTSTLFKLNADSSN 388
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.4 bits (48), Expect = 9.6
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 200 SDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 322
SDI +A L E S + P ++IR+ +++ + LG++ +++
Sbjct: 3211 SDIKKAHLIELRSLSRPPMAIRITMEVVC-KLLGFSATDWK 3250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,309,400
Number of Sequences: 5004
Number of extensions: 24546
Number of successful extensions: 83
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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