Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O19
(272 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 54 5e-09
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 46 7e-07
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 46 1e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 37 4e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 35 0.002
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 33 0.007
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 30 0.051
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 27 0.36
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 27 0.48
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 1.1
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 25 1.5
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 25 1.5
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 25 1.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 2.5
SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces pomb... 25 2.5
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 24 4.4
SPBC4.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Ma... 24 4.4
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 23 5.9
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 23 5.9
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 23 5.9
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 23 5.9
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 23 7.8
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 23 7.8
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 23 7.8
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 23 7.8
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 23 7.8
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 23 7.8
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 23 7.8
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 23 7.8
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 23 7.8
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 23 7.8
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 23 7.8
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 23 7.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 53.6 bits (123), Expect = 5e-09
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +1
Query: 94 YLCSAAEEDVLDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKPEYAVAAGILKKD 264
+ C++AE V + + ++ +V FYAPWCGHCK L PEY AA L+KD
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKD 71
Score = 50.4 bits (115), Expect = 4e-08
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 109 AEEDVLDLTDSDFSS-VLDQHDTALVMFYAPWCGHCKRLKPEY 234
++ED++ L +F V+D+ LV FYAPWCGHCK L P Y
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTY 395
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 46.4 bits (105), Expect = 7e-07
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 118 DVLDLTDSDFSSV-LDQHDTALVMFYAPWCGHCKRLKPEYAVAAGILKKD 264
+V++L +F V +D LV FYA WCG+CKRL P Y + K +
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE 190
Score = 39.5 bits (88), Expect = 8e-05
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 52 MSVSLKSLFLLGLVYLCSAAEEDVLDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKPE 231
M + L S + L L A+ L + +++ AL+ FYA WCGHCK L P
Sbjct: 1 MRLPLLSFVIFALFALVFASGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPV 60
Query: 232 Y 234
Y
Sbjct: 61 Y 61
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 46.0 bits (104), Expect = 1e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 118 DVLDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKPEYAVAAGIL 255
+ ++L +F + +LV+FYAPWCG+CK+L P Y A L
Sbjct: 32 NTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNL 77
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 37.1 bits (82), Expect = 4e-04
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 139 SDFSSVLDQHDTALVMFYAPWCGHCKRLKPEY 234
S+F S++ Q +V F+A WCG CK + P++
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF 40
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 35.1 bits (77), Expect = 0.002
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 142 DFSSVLDQHDTALVMFYAPWCGHCKRLKP 228
D+++ + +V FYA WCG CK LKP
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP 55
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 33.1 bits (72), Expect = 0.007
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 130 LTDSDFSSVLDQHDTALVMFYAPWCGHCKRLKP 228
LTD+D S + + T + +Y P CG CKRL P
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGP 62
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 30.3 bits (65), Expect = 0.051
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -1
Query: 158 NTDEKSESVRSNTSSSA-AEHKYTNPSKNKDFSDTDI-IKSRRQLL*NR 18
N K E ++ SA +HK PS+N++ +D +I I++RRQ++ N+
Sbjct: 399 NICSKEELYETDLKESAPTQHKQPAPSENENKADQEIDIEARRQIIKNK 447
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 27.5 bits (58), Expect = 0.36
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 190 YAPWCGHCKRLKPEYAVAA 246
YA WCG CK + P ++ A
Sbjct: 27 YADWCGPCKAISPLFSQLA 45
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 27.1 bits (57), Expect = 0.48
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = -1
Query: 185 MTKAVSC*SNTDEKSESVRSNTSSSAAEHKYTNPSKNKDFSDTDIIKSRRQLL 27
++KA+ +T + S+ +NTSS+A ++K P+K+ FSD SR + L
Sbjct: 243 VSKAIQLVKSTSDLG-SLSTNTSSTAQKNKSRKPTKS--FSDAVAAASRAKEL 292
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 1.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 161 SNTDEKSESVRSNTSSSAAEHKYTNPSKN--KDFSDTDI 51
+ DE+S S +SN+ S A+ K + K F+DT +
Sbjct: 93 AENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSL 131
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 1.5
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 28 NNCRRDLIMSVSLKSLFLLGLVYLCSAAEEDVLDLT-----DSDFSSVLDQHDTALVMFY 192
+ R L + L LL L+YL +A ++ + D D V DQ++ + +FY
Sbjct: 47 HKAERRLCRKFDFRILPLLALLYLFNALDKSNVSNAKTNGMDKDLGFVGDQYNIMISIFY 106
Query: 193 APW 201
P+
Sbjct: 107 IPF 109
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 1.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 178 LVMFYAPWCGHCKRL 222
L+ FYAPW CK++
Sbjct: 24 LLNFYAPWAAPCKQM 38
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 22 FYNNCRRDLIMSVSLKSLFLLGLV 93
FY N R ++++ L +LFL+G+V
Sbjct: 786 FYKNFRTYVVLTWILSNLFLVGIV 809
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 24.6 bits (51), Expect = 2.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -1
Query: 158 NTDEKSESVRSNTSSSAAEHKYTNPSKNKDFS--DTD 54
+T+E S++ + ++S HK +N S+ KD S DTD
Sbjct: 110 STEETSDTNVALNNTSEISHKSSNNSQPKDASVNDTD 146
>SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 131 RSNTSSSAAEHKYTNPSKNKDFSDT 57
R + +A+EHKY N N+ F D+
Sbjct: 114 RFESDMTASEHKYLNEFLNQAFRDS 138
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 88 LVYLCSAAEEDVLD 129
L+Y C AA+E++LD
Sbjct: 6 LIYACRAADEELLD 19
>SPBC4.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 248
Score = 23.8 bits (49), Expect = 4.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 7 GIYARFYNNCRRDLIMSVSLKSLFLLGLVYLC 102
G+ AR YN I S ++ + L L++LC
Sbjct: 12 GLVARIYNYIPHPSIFSNAILGIAWLFLIFLC 43
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 23.4 bits (48), Expect = 5.9
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 61 SLKSLFLLGLVYLCSAAEEDVLDLTDSDFSSVLDQHDTALVMFY 192
SL S+F + L+ LC E ++ +S + +++ +T+ +FY
Sbjct: 3 SLHSIFCVCLILLCIFKENSIVGAINS--ARMVELRETSRRLFY 44
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 23.4 bits (48), Expect = 5.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 152 DEKSESVRSNTSSSAAEHKYTNPSKNKDFSDT 57
+E + + S T S K +P+KN DFS T
Sbjct: 445 EEHLDFIPSLTPSKNYPSKIYSPNKNLDFSHT 476
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 23.4 bits (48), Expect = 5.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 149 EKSESVRSNTSSSAAEHKYTN 87
+K S+++NT S+AA+ Y N
Sbjct: 73 KKPNSIKNNTYSTAAQAAYLN 93
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 23.4 bits (48), Expect = 5.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1
Query: 158 NTDEKSESVRSNTSSSAAEHKYTNPSKNKD---FSDTDIIKS 42
++ S S +S++SSS++ +PS +K FS + I S
Sbjct: 188 SSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITS 229
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 23.0 bits (47), Expect = 7.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 124 LDLTDSDFSSVLDQHDTALVMFYAPWCGHCKRL 222
L D+ F + HD + FYA + KR+
Sbjct: 951 LSFDDASFKENMCVHDGKVPTFYADYVNEVKRI 983
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 23.0 bits (47), Expect = 7.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 42 RFNYVGVTEIFIFTRISIFMFGCRRGCIRSYR 137
+F+Y T I+ ISIF G + YR
Sbjct: 562 KFHYNQRTTIYYLVAISIFALGLTYAAVPLYR 593
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 23.0 bits (47), Expect = 7.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 125 NTSSSAAEHKYTNPSKNKDFSDTDIIKSRRQLL 27
+TS+S AE T PSK + D D++ LL
Sbjct: 384 DTSTSKAELS-TPPSKRRHIDDADLVFHSSPLL 415
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 23.0 bits (47), Expect = 7.8
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -1
Query: 161 SNTDEKSESVR--SNTSSSAAEHKYTNPSKNKDFS 63
S++D +SES S++SSS+++ + + SK+ D S
Sbjct: 239 SSSDSESESSSEDSDSSSSSSDSESESSSKDSDSS 273
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 19 RFYNNCRRDLIMSVSLKSLFLLGLVYLCS 105
RFY+ + + + L L LLGL+Y CS
Sbjct: 115 RFYSEIWGPIAIYICLFVLLLLGLIY-CS 142
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 23.0 bits (47), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 137 SVRSNTSSSAAEHKYTNPSKN 75
S+R+N S E Y NP N
Sbjct: 847 SIRTNASDCTLEVAYLNPQNN 867
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 23.0 bits (47), Expect = 7.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 42 RFNYVGVTEIFIFTRISIFMFGCRRGCIRSYR 137
+F+Y T I+ ISIF G + YR
Sbjct: 562 KFHYNQRTTIYYLVAISIFALGLTYAAVPLYR 593
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 23.0 bits (47), Expect = 7.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 33 LPARFNYVGVTEIFIFTRISI 95
L FNY+G+T +I T I I
Sbjct: 412 LAVLFNYIGITISWIITFIGI 432
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 23.0 bits (47), Expect = 7.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 115 EDVLDLTDSDFSSVLDQHDT 174
E+V D+TDSD +S L DT
Sbjct: 397 EEVTDMTDSDTASGLIFDDT 416
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 19 RFYNNCRRDLIMSVSLKSLFLLGLVYLCS 105
RFY+ + + + L L LLGL+Y CS
Sbjct: 115 RFYSEIWGPIAIYICLFILLLLGLIY-CS 142
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 19 RFYNNCRRDLIMSVSLKSLFLLGLVYLCS 105
RFY+ + + + L L LLGL+Y CS
Sbjct: 115 RFYSEIWGPIAIYICLFVLLLLGLIY-CS 142
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 23.0 bits (47), Expect = 7.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 161 SNTDEKSESVRSNTSSSAAEHK 96
SN + +SVR N +SSA E K
Sbjct: 71 SNFFSEKQSVRENGNSSAGEKK 92
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,022,614
Number of Sequences: 5004
Number of extensions: 17232
Number of successful extensions: 88
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 59659786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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