Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O18
         (359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY167996-1|AAO38810.1|  228|Homo sapiens alpha 2,3-sialyltransfe...    31   1.1  
AL583834-11|CAM20552.1|  217|Homo sapiens protein ( amily 22 (or...    30   1.9  
AL583834-10|CAI14469.1|  204|Homo sapiens protein ( amily 22 (or...    30   1.9  
AL583834-9|CAI14468.1|  109|Homo sapiens protein ( amily 22 (org...    30   1.9  

>AY167996-1|AAO38810.1|  228|Homo sapiens alpha
           2,3-sialyltransferase III type C9 protein.
          Length = 228

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -1

Query: 296 DVYLQICQQCSGRLVSCLRCSRAPDRFQSITR--SRRRSVPSCATP 165
           D+ +++ +  SG L   L C R+P RF+S T   SRR   PS A P
Sbjct: 166 DIVVRVHRMASGNLWP-LECPRSPLRFESSTHISSRRPPSPSLACP 210


>AL583834-11|CAM20552.1|  217|Homo sapiens protein ( amily 22
           (organic anion  ).).
          Length = 217

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 248 CLRCSRAPDRFQSITRSRRRSVPSCATPCFG 156
           CLRC R      + + +    VP C  PC+G
Sbjct: 148 CLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 178


>AL583834-10|CAI14469.1|  204|Homo sapiens protein ( amily 22
           (organic anion  ).).
          Length = 204

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 248 CLRCSRAPDRFQSITRSRRRSVPSCATPCFG 156
           CLRC R      + + +    VP C  PC+G
Sbjct: 148 CLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 178


>AL583834-9|CAI14468.1|  109|Homo sapiens protein ( amily 22
           (organic anion  ).).
          Length = 109

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 248 CLRCSRAPDRFQSITRSRRRSVPSCATPCFG 156
           CLRC R      + + +    VP C  PC+G
Sbjct: 71  CLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,893,035
Number of Sequences: 237096
Number of extensions: 889339
Number of successful extensions: 2195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2195
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)