Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O17
(427 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 253 1e-68
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 247 5e-67
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 215 2e-57
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 179 1e-46
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 152 3e-38
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 108 3e-25
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 101 5e-23
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 61 6e-11
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.23
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.23
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 0.40
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 28 0.70
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 27 0.92
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 27 1.6
SPBC800.06 |brx1||ribosome biogenesis protein Brx1|Schizosacchar... 27 1.6
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 26 2.1
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 2.1
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 2.1
SPBP35G2.07 |ilv1||acetolactate synthase catalytic subunit|Schiz... 26 2.1
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 3.7
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 25 3.7
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 4.9
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 25 4.9
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 4.9
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 25 6.5
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 25 6.5
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 6.5
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 24 8.6
SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 24 8.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 24 8.6
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 24 8.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 253 bits (619), Expect = 1e-68
Identities = 120/139 (86%), Positives = 130/139 (93%)
Frame = +2
Query: 11 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 190
KDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+GIFE
Sbjct: 157 KDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFE 216
Query: 191 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSST 370
VK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+T N RA+RRLRTACERAKRTLSSS
Sbjct: 217 VKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSA 276
Query: 371 QASIEIDSLFEGIDFYTSI 427
QASIEIDSLFEGIDFYTSI
Sbjct: 277 QASIEIDSLFEGIDFYTSI 295
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 247 bits (605), Expect = 5e-67
Identities = 118/139 (84%), Positives = 128/139 (92%)
Frame = +2
Query: 11 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 190
KDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+GIFE
Sbjct: 157 KDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFE 216
Query: 191 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSST 370
VK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+T N RA+RRLRTACERAKRTLSSS
Sbjct: 217 VKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSA 276
Query: 371 QASIEIDSLFEGIDFYTSI 427
QASIEIDSL+EGIDFYTSI
Sbjct: 277 QASIEIDSLYEGIDFYTSI 295
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 215 bits (526), Expect = 2e-57
Identities = 102/139 (73%), Positives = 118/139 (84%)
Frame = +2
Query: 11 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 190
KDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+ G+FE
Sbjct: 161 KDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFE 220
Query: 191 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSST 370
V +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS T
Sbjct: 221 VLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVT 280
Query: 371 QASIEIDSLFEGIDFYTSI 427
Q ++E+DSL GIDF +SI
Sbjct: 281 QTTVEVDSLSNGIDFSSSI 299
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 179 bits (436), Expect = 1e-46
Identities = 81/135 (60%), Positives = 110/135 (81%)
Frame = +2
Query: 11 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 190
KDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++G+FE
Sbjct: 190 KDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFE 248
Query: 191 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSST 370
V +T+GDTHLGGEDFDNR++N+ + + RK D+T + +A+ +L+ E+AKRTLSS
Sbjct: 249 VLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQK 308
Query: 371 QASIEIDSLFEGIDF 415
IEI+S F G DF
Sbjct: 309 SVRIEIESFFNGQDF 323
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 152 bits (368), Expect = 3e-38
Identities = 72/126 (57%), Positives = 96/126 (76%)
Frame = +2
Query: 11 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 190
K AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +G+FE
Sbjct: 203 KAAGAIAGLNVLRVVNEPTAAALAYGLDKKN--DAIVAVFDLGGGTFDISILELNNGVFE 260
Query: 191 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSST 370
V+ST GDTHLGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS +
Sbjct: 261 VRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLS 320
Query: 371 QASIEI 388
+ I +
Sbjct: 321 KTDISL 326
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 108 bits (260), Expect = 3e-25
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
Frame = +2
Query: 14 DAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDG 181
+A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VSI+ G
Sbjct: 162 EAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRG 221
Query: 182 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLS 361
F +KST D +LG + D ++++F EFK KYK D+ SN +A RL TA ER K+ LS
Sbjct: 222 QFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLS 281
Query: 362 SSTQASIEIDSLFEGID 412
++ A + ++ + ID
Sbjct: 282 ANANAPLNVEMIMNDID 298
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 101 bits (242), Expect = 5e-23
Identities = 49/139 (35%), Positives = 86/139 (61%)
Frame = +2
Query: 11 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 190
+ A +GL VL++I++P A +A ++ ++ V++ + G +VS+++++ G+
Sbjct: 183 ESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMT 242
Query: 191 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSST 370
+ ++ D +LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T
Sbjct: 243 ILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGT 302
Query: 371 QASIEIDSLFEGIDFYTSI 427
AS +DSL +GIDF++SI
Sbjct: 303 TASAAVDSLADGIDFHSSI 321
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 61.3 bits (142), Expect = 6e-11
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Frame = +2
Query: 14 DAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLGGGTFDVSIL---TIE-- 175
+A I +VL +I++ A AI Y L + T +I+D G G+ +++ T+E
Sbjct: 181 EAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSATVISFDTVEGS 240
Query: 176 -----DGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTA 334
I +++ A G T L G + + +++ F +K+ DL+ N RAL RL
Sbjct: 241 SLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKE 300
Query: 335 CERAKRTLSSSTQASIEIDSLFEGIDFYTSI 427
R K LS++++A I+ L +GIDF I
Sbjct: 301 ALRVKHILSANSEAIASIEELADGIDFRLKI 331
>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 29.5 bits (63), Expect = 0.23
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 237 SKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPP 136
S SS C PA++FTS+I + + ++ + P P
Sbjct: 178 SASSVISCTPPAINFTSDICNEQIELEYKRKPIP 211
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.23
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -2
Query: 237 SKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLS 91
+ S PP P + +IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.7 bits (61), Expect = 0.40
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 245 MVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSSTQASI 382
+++ F EFK++ K D TS L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 27.9 bits (59), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 102 PFLSRPYAIAAAVGSLIIRRTFRP 31
P PYA+A+ GSL+ R FRP
Sbjct: 272 PSAQGPYALASNYGSLLARIVFRP 295
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 27.5 bits (58), Expect = 0.92
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = -2
Query: 225 PPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIAAAVGSLIIR 46
PP S P V VP P S S R P+L I+ + G+LI++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473
Query: 45 RTFRPEMVPASFAS 4
+ ++ +F++
Sbjct: 474 NHNQLSLLKCTFSN 487
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 26.6 bits (56), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 192 TSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPY 82
TSN P VR + VP S + + P + RPY
Sbjct: 199 TSNCPPKYVRSTINCVPTTNSLLKKSKIPFALVIRPY 235
>SPBC800.06 |brx1||ribosome biogenesis protein
Brx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -1
Query: 190 FEYTILDGQDGHIEGAAAEVKDEYVSFSSTLLVKAVRNRSSCRFIDNTKN 41
F TI++ +G G D +VS ST++ A+RN+++ R+++ ++
Sbjct: 225 FVMTIINILEGSFGGPVIYKNDTFVS--STMVRAAIRNQAAQRYVNRQES 272
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 2.1
Identities = 26/75 (34%), Positives = 31/75 (41%)
Frame = -2
Query: 225 PPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIAAAVGSLIIR 46
PPK VS + SN P V D+ P P S F P P PY I AA L +R
Sbjct: 123 PPKRVSLGIPSISNPPVDTVISDSPTSPHPPS----FVQPHP----PYGIFAA-PILDVR 173
Query: 45 RTFRPEMVPASFASC 1
P V ++ C
Sbjct: 174 VLTNPGAVKRTYNLC 188
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 2.1
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 89 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 259
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 237 SKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSK 127
+KSSP K VSP V S +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPBP35G2.07 |ilv1||acetolactate synthase catalytic
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 669
Score = 26.2 bits (55), Expect = 2.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -2
Query: 267 SCTKWLTMRLSKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLS 91
SCTKW M + P+ + A + ++ V +D P S + P+P LS
Sbjct: 207 SCTKWNVMVKDVADLPRRIDEAFEIATSGRPGPVLVDL----PKDVTASVLKEPIPILS 261
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 3.7
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -2
Query: 213 VSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVP 100
V+ D +++P + + T + PPR K + +P+P
Sbjct: 71 VNHTTDSMAHVPGNNSPLQTPQKSPPRQKHTAPATPIP 108
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 3.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -2
Query: 243 RLSKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVP 100
+ S S+P SPA + +++P V +S V S T + P
Sbjct: 76 KTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAAAAP 123
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 4.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 146 TFDVSILTIEDGIFEVKSTAGDTHL 220
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
Score = 24.2 bits (50), Expect = 8.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 207 PAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRS 109
P+V FT + ++R+ S +PPP + T S
Sbjct: 378 PSVMFTMRYLALILRVQNSNMPPPAPRPVTNNS 410
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 4.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 212 THLGGEDFDNRMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSSTQASIEID 391
THL V+ F+ F R + + L+SNK L L + E + L + Q + +
Sbjct: 1482 THLYKYYLRRNFVSSFIDAFSRAFSELLSSNKDVLEVL-SGLEAGQCLLITFAQNKLTVH 1540
Query: 392 SL 397
S+
Sbjct: 1541 SV 1542
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 4.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 101 PSCQGRTQSQQLSVH**YEEHSDQRWYPH 15
P+ GRTQ Q Y +SD YPH
Sbjct: 674 PTYGGRTQDQSYPRQNGYPSYSDGNVYPH 702
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 24.6 bits (51), Expect = 6.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 187 EYTILDGQDGHIEGAAAEVKDEYVSFSSTLLVKAVRNRSSCRFIDNTKNIQTRD 26
E TI +GQ+G + A KD+ V +S + R+ + R I K + D
Sbjct: 383 EETISNGQNGIVASAETSKKDDGVQSASLNASMSARSHARQRSIHVPKTRKDTD 436
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 24.6 bits (51), Expect = 6.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 22 YHLWSECSSYY 54
YHLW +C+ Y+
Sbjct: 377 YHLWKDCNPYF 387
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 24.6 bits (51), Expect = 6.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 248 VNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLSSSTQASIEIDS 394
V+HF+++ +RKY L + + +L++ ++ K S + I+ D+
Sbjct: 1872 VDHFIRKHERKYFNGLRKQEIDV-KLKSRSDKEKSCTVSESYKQIDCDT 1919
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 24.2 bits (50), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 230 DFDNRMVNHFVQEFKRKYKKDLTSNKR----ALRRLRTACERAKRTLSSS-TQASIEIDS 394
D+ R HF + KR+YKK + K+ A ++ E A + ++S+ +S E
Sbjct: 23 DYKRRNDPHFRKTLKRRYKKVHEAKKQEEKLATKKFDITVEEALQVVASTPVPSSAEEKE 82
Query: 395 LF 400
LF
Sbjct: 83 LF 84
>SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 24.2 bits (50), Expect = 8.6
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 117 FRSPVPFLSRPYAIAAAVG-SLIIRRTFRPEM 25
FRS PFL + A A V ++++ +T+ P +
Sbjct: 47 FRSAPPFLFKSAAFGAIVAYAIVLYKTYSPNL 78
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.2 bits (50), Expect = 8.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 242 RMVNHFVQEFKRKYKKDLTSNKRALRRLRTACERAKRTLS 361
R ++ +QEFKRK + K LR+L E + LS
Sbjct: 950 RELDKSIQEFKRKCQSMEREFKTELRKLDGVLEARSKRLS 989
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 24.2 bits (50), Expect = 8.6
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -2
Query: 225 PPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRS--KMSTFRSPVPFLSRPYAIAAAVGSLI 52
PP P + S I + M M + PPP + + + F Y AAA
Sbjct: 80 PPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPPAYPEAAATSDAA 139
Query: 51 IRR 43
R+
Sbjct: 140 FRK 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,708,535
Number of Sequences: 5004
Number of extensions: 31855
Number of successful extensions: 135
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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