Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O16
         (260 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    28   1.1  
AC006770-3|AAF60595.1|  508|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z93389-7|CAJ43450.2|  201|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AF036694-3|AAB88343.3|  344|Caenorhabditis elegans Hypothetical ...    26   4.2  
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    25   5.6  
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    25   5.6  
Z72503-5|CAI79155.1|  513|Caenorhabditis elegans Hypothetical pr...    25   5.6  
U64841-2|AAB04846.2|  337|Caenorhabditis elegans Serpentine rece...    25   7.4  
U42830-5|AAC48280.2|  437|Caenorhabditis elegans Hypothetical pr...    25   7.4  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    25   9.8  

>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 53  EMFFL*FPYKNIYIHKRSLFHSEVYLIIKYIERRIFVYVLSYQNHGFV 196
           ++F + F +KN Y+ K S F   +++    I  R+FVY++S     F+
Sbjct: 62  QLFCVCFIWKNGYL-KLSTFFIILFIHSSIISLRVFVYIISSLASAFI 108


>AC006770-3|AAF60595.1|  508|Caenorhabditis elegans Hypothetical
           protein Y46B2A.1 protein.
          Length = 508

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 59  FFL*FPYKNIYIHKRSLFHSE-VYLIIKYIE 148
           F L  P KN+Y+    LFH + V LI  +IE
Sbjct: 380 FLLKLPQKNVYMLHSPLFHHDYVQLIDNWIE 410


>Z93389-7|CAJ43450.2|  201|Caenorhabditis elegans Hypothetical
           protein T13F3.9 protein.
          Length = 201

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 165 TFCHTRTMDSCEGVEQDLDKAITKLNNLN 251
           TF    T+D C  +  DLD  +  +N  N
Sbjct: 8   TFTLAVTLDDCNNIASDLDPIVKSINVTN 36


>AF036694-3|AAB88343.3|  344|Caenorhabditis elegans Hypothetical
           protein CD4.5 protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 74  PYKNIYIHKRSLFHSEVYLIIKYIERRIFVYVLSYQNHGFV 196
           PY +  + K + +  E  LI+K   R+IF    + + H F+
Sbjct: 281 PYNSPQLRKDAFWRGEQKLILKEGSRKIFFVAENVKKHQFL 321


>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
            C26C6.1a protein.
          Length = 1883

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 92   IHKRSLFHSEVYLIIKYIE 148
            IH R + HSE YL  KYIE
Sbjct: 1790 IHSRRVLHSEAYL--KYIE 1806


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
            protein C26C6.1a protein.
          Length = 1883

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 92   IHKRSLFHSEVYLIIKYIE 148
            IH R + HSE YL  KYIE
Sbjct: 1790 IHSRRVLHSEAYL--KYIE 1806


>Z72503-5|CAI79155.1|  513|Caenorhabditis elegans Hypothetical
           protein C26C6.1b protein.
          Length = 513

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 92  IHKRSLFHSEVYLIIKYIE 148
           IH R + HSE YL  KYIE
Sbjct: 420 IHSRRVLHSEAYL--KYIE 436


>U64841-2|AAB04846.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein14 protein.
          Length = 337

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 107 LFHSEVYLIIKYIERRIFVYVLSYQN 184
           +FH +V+ ++K+I   + +YV  + N
Sbjct: 126 IFHKKVFPLVKFIVLALSIYVTFFTN 151


>U42830-5|AAC48280.2|  437|Caenorhabditis elegans Hypothetical
           protein C53B7.7 protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 48  EEKCFFCNFLT-KIFTFTRGRYFI 116
           +    FC F + KIF  TRG YFI
Sbjct: 211 QNNTLFCLFYSAKIFVRTRGSYFI 234


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 139 VYRAKDFCLRFVIPEPWIRVK 201
           V  AKDF  R++ PE W +++
Sbjct: 581 VAEAKDFIRRYLSPEQWRKLR 601


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,842,287
Number of Sequences: 27780
Number of extensions: 101214
Number of successful extensions: 200
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)