Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O15
         (294 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097029-1|BAC77382.1|  336|Homo sapiens putative MAPK activatin...    29   2.7  
AB097028-1|BAC77381.1|  336|Homo sapiens putative MAPK activatin...    29   2.7  
AB097019-1|BAC77372.1|  336|Homo sapiens putative NFkB activatin...    29   2.7  
AL161449-8|CAI40495.1|  228|Homo sapiens multiple PDZ domain pro...    28   6.2  

>AB097029-1|BAC77382.1|  336|Homo sapiens putative MAPK activating
           protein protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 26  GTAADNDYLPLSGGASGSNYRPPKKSKC-NGGGCG 127
           GTA + +    + GA+GS   PP    C NGGG G
Sbjct: 29  GTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRG 63


>AB097028-1|BAC77381.1|  336|Homo sapiens putative MAPK activating
           protein protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 26  GTAADNDYLPLSGGASGSNYRPPKKSKC-NGGGCG 127
           GTA + +    + GA+GS   PP    C NGGG G
Sbjct: 29  GTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRG 63


>AB097019-1|BAC77372.1|  336|Homo sapiens putative NFkB activating
           protein protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 26  GTAADNDYLPLSGGASGSNYRPPKKSKC-NGGGCG 127
           GTA + +    + GA+GS   PP    C NGGG G
Sbjct: 29  GTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRG 63


>AL161449-8|CAI40495.1|  228|Homo sapiens multiple PDZ domain
           protein protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 95  WAGGSLIRKRHHSAVSNHCQQQS 27
           WAG  ++ KR+ S    HCQ+++
Sbjct: 184 WAGDQILEKRYWSICVRHCQRRN 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,110,605
Number of Sequences: 237096
Number of extensions: 984687
Number of successful extensions: 1969
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1969
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)