Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O11
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.35 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   1.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   1.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   2.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   7.5  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    20   7.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   7.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    20   9.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   9.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   9.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   9.9  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 116 FDYEIERPRRLLDQHFGLAITPED-LLNASIGPMVKNEYYRP 238
           FDY+   P+ +     G + T +D +   ++ PM  N YY P
Sbjct: 232 FDYD---PKYIKMMDAGESFTAQDGIFGMALSPMTNNLYYSP 270


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 40  ERNQQGVLRNCFHRLK 87
           E+N++  LRNC  +LK
Sbjct: 57  EKNRRAHLRNCLEKLK 72


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 298 LSLSALIQEPTSGGGGEMTPRA 233
           +S+SAL+    S  GG++ P A
Sbjct: 392 VSMSALVSAVRSPAGGQLPPSA 413


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 222 TNTTARGVISPPPPDVGSCI 281
           T+TTA    +PP   VGS +
Sbjct: 44  TSTTAAATPTPPSVPVGSAV 63


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 199 IYRPDGKKRILPPV 240
           I+RPD K   LPP+
Sbjct: 147 IHRPDTKLMKLPPM 160


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 167 LAITPEDLLNASIGPMVKNEYYRPW 241
           LAI+   ++     PMV N YY  W
Sbjct: 60  LAISDFLMMFCMSPPMVINCYYETW 84


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 199 IYRPDGKKRILPPV 240
           I+RPD K   LPP+
Sbjct: 147 IHRPDTKLMKLPPM 160


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 209 PMVKNEYYRPW 241
           PMV N YY  W
Sbjct: 108 PMVINCYYETW 118


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 60  NALLIALSRSYAV 22
           NALLI +S  YAV
Sbjct: 681 NALLILISTVYAV 693


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 265 SGGGGEMTPRAVVFVFYH 212
           S GG E+TPR     ++H
Sbjct: 149 SSGGEEITPRQSHQSYHH 166


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 60  NALLIALSRSYAV 22
           NALLI +S  YAV
Sbjct: 771 NALLILISTVYAV 783


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,624
Number of Sequences: 438
Number of extensions: 1529
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)