Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O09
(399 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0419 - 3316866-3318172,3318249-3318360 33 0.063
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 31 0.25
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 30 0.77
11_06_0723 - 26688378-26688385,26689351-26689569,26690100-266901... 28 2.4
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 28 3.1
04_03_0904 + 20717005-20718087 28 3.1
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484... 28 3.1
10_02_0143 + 5795028-5795108,5795197-5795403,5795878-5795976,579... 27 5.5
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 27 5.5
06_02_0211 - 13043968-13044646,13044752-13045037,13045903-130459... 27 5.5
01_01_0165 - 1410137-1410924,1411774-1411933 27 5.5
09_06_0348 + 22452219-22452360,22452791-22452912,22453342-224534... 27 7.2
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 27 7.2
04_03_0357 + 14852584-14853058,14853116-14855754 27 7.2
12_01_0144 - 1097579-1097604,1097940-1098127,1098567-1098720,109... 26 9.5
08_01_0137 - 1083622-1084239 26 9.5
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 33.5 bits (73), Expect = 0.063
Identities = 23/76 (30%), Positives = 29/76 (38%)
Frame = +3
Query: 129 LEPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNE 308
+EPPV +E ET T EP+ P TPP + E Q V E
Sbjct: 320 VEPPV-QEPPAEETPTATEPEPEPPAAEEPPAAEPEQEPQPETPPVESETPAEEQAPVQE 378
Query: 309 NPNATEVKSETEPNNK 356
P A E + EP +
Sbjct: 379 PPAADETPAAGEPEEQ 394
>06_01_1087 +
8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 273 LYPLVVWVTFHLLYPLF*FHSKIRAE 196
L PLV WV FH +Y L F SKI ++
Sbjct: 643 LAPLVCWVHFHTIYMLLNFISKIESD 668
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 29.9 bits (64), Expect = 0.77
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKE--EEPLSQESVN 305
EPPV++ + AT + PK + S PT D E + P +
Sbjct: 134 EPPVSKAEVSEQLATPKTPKSL-----SATEEKPSHSTESPTYKGDSEAPQSPTDPSTAE 188
Query: 306 ENPNATEVKSETEPNNKD 359
EN +TE + E N+D
Sbjct: 189 ENSGSTETGNTIETGNQD 206
>11_06_0723 -
26688378-26688385,26689351-26689569,26690100-26690106,
26690194-26690256,26690329-26690400,26690507-26691681,
26692024-26692626,26692643-26692781
Length = 761
Score = 28.3 bits (60), Expect = 2.4
Identities = 24/109 (22%), Positives = 47/109 (43%)
Frame = +1
Query: 61 CRLLKLEVVKVTQLRLHQHHS*SWNHQLLKRTNLQKQQP*KNRKKFSPNFRVKLKKRIQK 240
C L+ ++ + Q+++ HH S Q ++ K K K V+ + R
Sbjct: 526 CNLV-MDGLNELQIKIDAHHG-SKEIQEYQQNGKNKDMVLKQGKMVLSPISVRRRGRPPS 583
Query: 241 MKSYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTRTIGSKEKQ 387
++ ++ R+ R K+ I++ +R R RT+ + SK+KQ
Sbjct: 584 LRKQSKLDQVVRRLRMKKQQESTIEV----QSRRRRKTRTKNVISKDKQ 628
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 252 PTPPTDKEEEPLSQE--SVNENPNATEVKSETE 344
P PP K EEP +E E P A E K+E E
Sbjct: 112 PPPPPAKAEEPAKEEEPKAAEAPAAEEPKAEAE 144
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/76 (22%), Positives = 25/76 (32%)
Frame = +3
Query: 135 PPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNENP 314
PP + +P T T P P + PTPP+ K + + P
Sbjct: 154 PPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTP 213
Query: 315 NATEVKSETEPNNKDT 362
K + +PN T
Sbjct: 214 TPPSYKPQPKPNPPPT 229
>03_03_0168 -
15047383-15047847,15048085-15048192,15048313-15048464,
15048555-15048752,15049553-15050856,15051281-15051354,
15051458-15051492,15052853-15053015
Length = 832
Score = 27.9 bits (59), Expect = 3.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +3
Query: 135 PPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNENP 314
PP+ E ++ + EEP +V L PTDK EEP V+
Sbjct: 183 PPITEVSQSLTVSAAEEPPKVN--------AVATHEAPLSKAPTDKGEEPPIAGDVSTVE 234
Query: 315 NA-TEVKSETEPNNKDTND 368
N ++ TEP + T D
Sbjct: 235 NEHLHAENNTEPFVEKTQD 253
>10_02_0143 +
5795028-5795108,5795197-5795403,5795878-5795976,
5796136-5796224,5797876-5797992,5798262-5798367,
5798522-5798606,5798699-5798808,5799335-5799465,
5799686-5799782,5800310-5800603
Length = 471
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 249 LPTPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTN-DW 371
+PTPPTD S NP A + S ++ D + DW
Sbjct: 48 IPTPPTDSGAPACSLLRAAPNPKAAKAASSDASSSLDFDVDW 89
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 193 KFSPNFRVKLKKRIQKMKSYPHHQRIKRKNRSHKKVSMKIQML 321
+ +P+ +K KK+ +K K ++ K+K + KK ++ M+
Sbjct: 363 RLNPSKTIKRKKKKKKKKKKKKKKKKKKKKKKKKKKKLRFVMI 405
>06_02_0211 -
13043968-13044646,13044752-13045037,13045903-13045979,
13046039-13046139,13046348-13046412,13048296-13048581
Length = 497
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 273 EEEPLSQESVNENPNATEVKSETEPNNKDTND 368
EEE +E+V+ +P+ +E++ E EP ++ D
Sbjct: 12 EEEEEEEEAVDYSPHRSELEPEPEPESETDAD 43
>01_01_0165 - 1410137-1410924,1411774-1411933
Length = 315
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 193 KFSPNFRVKLKKRIQKMKSYPHHQRIKRKN 282
KFSP ++K K ++ K + Q KRKN
Sbjct: 283 KFSPELKLKPKSKLVPRKKWQKAQARKRKN 312
>09_06_0348 +
22452219-22452360,22452791-22452912,22453342-22453436,
22453691-22453844,22453952-22454014,22454329-22454478,
22454650-22454982,22455086-22455820
Length = 597
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 255 TPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDT 362
TPP+D +E + + V + A E+ +ETE ++++
Sbjct: 166 TPPSDFADEIMYDDGVIQMDGADELATETETKDEES 201
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +3
Query: 138 PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNENPN 317
P+A E A V+E + ++ E LP P EE+P+ +E V +
Sbjct: 249 PLAPEQNSAHEEPVQEEQGIEVEV-PAETVEAVAQECLPDPDAVVEEKPVQEEEVGRSDL 307
Query: 318 ATEVK 332
+ V+
Sbjct: 308 SVPVR 312
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 258 PPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETE 389
P ++ E+E ES+ E+ E SE + + W++ E E
Sbjct: 945 PESESEDEDSDSESLVESDEDDEDDSEEDSEEEKGKTWEELERE 988
>12_01_0144 -
1097579-1097604,1097940-1098127,1098567-1098720,
1098825-1099092,1099310-1099550,1099669-1099833,
1099898-1100298
Length = 480
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 297 SVNENPNATEVKSETEPNNKDTNDWQQRE 383
++NEN N T ++ T +NK N++ RE
Sbjct: 342 NINENDNPTHLEDVTFRDNKLKNEFAMRE 370
>08_01_0137 - 1083622-1084239
Length = 205
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -1
Query: 282 VLPLYPLVVWVTFHLLYPLF*FHSKIRAE 196
+LP+ P + WV +++L P +++R+E
Sbjct: 99 LLPIAPAIAWVLYNILQPALNQLNRMRSE 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,053,015
Number of Sequences: 37544
Number of extensions: 121054
Number of successful extensions: 543
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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