Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O09
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 35 0.019
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 35 0.019
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 35 0.019
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 35 0.019
U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical pr... 30 0.70
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 0.93
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 29 1.6
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical pr... 27 3.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 3.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 3.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 3.7
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 27 3.7
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 27 3.7
Z22178-4|CAA80156.1| 359|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z82077-1|CAB63330.1| 124|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 6.5
Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical pr... 26 8.7
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 26 8.7
U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 26 8.7
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 26 8.7
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 26 8.7
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 35.1 bits (77), Expect = 0.019
Identities = 28/72 (38%), Positives = 30/72 (41%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
E PVAEE PAE A VEEP V E T EEPL + +V E
Sbjct: 188 EEPVAEETAPAEEAAVEEP--VVEE-------AAPVEEAPEAEETAPAEEPLIEVAVEEA 238
Query: 312 PNATEVKSETEP 347
P V E EP
Sbjct: 239 PAEEPVAEEAEP 250
Score = 29.9 bits (64), Expect = 0.70
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 EP-PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNE 308
EP PVAE AE A EEP E +PE T PT +E EP E+V E
Sbjct: 513 EPEPVAEAEPEAEPAVEEEPAE-EPE---------PAADETATEPTAEEAEP---EAVEE 559
Query: 309 NPNATEVKSE 338
+ TEV E
Sbjct: 560 SIEKTEVVEE 569
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKE--EEPLSQES-- 299
+ P EE KP E A EEP + T P ++ EEP+ +E+
Sbjct: 156 DEPAPEEEKPQEEAPAEEPAPAEEA--PQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAP 213
Query: 300 VNENPNATEVKSETEP 347
V E P A E EP
Sbjct: 214 VEEAPEAEETAPAEEP 229
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 35.1 bits (77), Expect = 0.019
Identities = 28/72 (38%), Positives = 30/72 (41%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
E PVAEE PAE A VEEP V E T EEPL + +V E
Sbjct: 138 EEPVAEETAPAEEAAVEEP--VVEE-------AAPVEEAPEAEETAPAEEPLIEVAVEEA 188
Query: 312 PNATEVKSETEP 347
P V E EP
Sbjct: 189 PAEEPVAEEAEP 200
Score = 29.9 bits (64), Expect = 0.70
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 EP-PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNE 308
EP PVAE AE A EEP E +PE T PT +E EP E+V E
Sbjct: 463 EPEPVAEAEPEAEPAVEEEPAE-EPE---------PAADETATEPTAEEAEP---EAVEE 509
Query: 309 NPNATEVKSE 338
+ TEV E
Sbjct: 510 SIEKTEVVEE 519
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKE--EEPLSQES-- 299
+ P EE KP E A EEP + T P ++ EEP+ +E+
Sbjct: 106 DEPAPEEEKPQEEAPAEEPAPAEEA--PQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAP 163
Query: 300 VNENPNATEVKSETEP 347
V E P A E EP
Sbjct: 164 VEEAPEAEETAPAEEP 179
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 35.1 bits (77), Expect = 0.019
Identities = 28/72 (38%), Positives = 30/72 (41%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
E PVAEE PAE A VEEP V E T EEPL + +V E
Sbjct: 188 EEPVAEETAPAEEAAVEEP--VVEE-------AAPVEEAPEAEETAPAEEPLIEVAVEEA 238
Query: 312 PNATEVKSETEP 347
P V E EP
Sbjct: 239 PAEEPVAEEAEP 250
Score = 29.9 bits (64), Expect = 0.70
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 EP-PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNE 308
EP PVAE AE A EEP E +PE T PT +E EP E+V E
Sbjct: 513 EPEPVAEAEPEAEPAVEEEPAE-EPE---------PAADETATEPTAEEAEP---EAVEE 559
Query: 309 NPNATEVKSE 338
+ TEV E
Sbjct: 560 SIEKTEVVEE 569
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKE--EEPLSQES-- 299
+ P EE KP E A EEP + T P ++ EEP+ +E+
Sbjct: 156 DEPAPEEEKPQEEAPAEEPAPAEEA--PQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAP 213
Query: 300 VNENPNATEVKSETEP 347
V E P A E EP
Sbjct: 214 VEEAPEAEETAPAEEP 229
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 35.1 bits (77), Expect = 0.019
Identities = 28/72 (38%), Positives = 30/72 (41%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
E PVAEE PAE A VEEP V E T EEPL + +V E
Sbjct: 188 EEPVAEETAPAEEAAVEEP--VVEE-------AAPVEEAPEAEETAPAEEPLIEVAVEEA 238
Query: 312 PNATEVKSETEP 347
P V E EP
Sbjct: 239 PAEEPVAEEAEP 250
Score = 29.9 bits (64), Expect = 0.70
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 EP-PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNE 308
EP PVAE AE A EEP E +PE T PT +E EP E+V E
Sbjct: 513 EPEPVAEAEPEAEPAVEEEPAE-EPE---------PAADETATEPTAEEAEP---EAVEE 559
Query: 309 NPNATEVKSE 338
+ TEV E
Sbjct: 560 SIEKTEVVEE 569
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +3
Query: 132 EPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKE--EEPLSQES-- 299
+ P EE KP E A EEP + T P ++ EEP+ +E+
Sbjct: 156 DEPAPEEEKPQEEAPAEEPAPAEEA--PQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAP 213
Query: 300 VNENPNATEVKSETEP 347
V E P A E EP
Sbjct: 214 VEEAPEAEETAPAEEP 229
>U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical
protein R03H10.1 protein.
Length = 379
Score = 29.9 bits (64), Expect = 0.70
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 258 PPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQ 377
PP D EPL +E+ N + + + EP KD++ W++
Sbjct: 337 PPKD---EPLEKENCKTTSNRSRLFKKNEPTKKDSSIWKR 373
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.5 bits (63), Expect = 0.93
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 133 NHQLLKRTNLQKQQP*KNRKKFSPNFRVKLKKRIQKMKSYPHHQRIK-RKNRSHKKVS-M 306
N + LKR KQQ + K+ + +F + +++Q+ K + +++ K ++ ++H++
Sbjct: 244 NQEKLKREEEIKQQNQEREKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERR 303
Query: 307 KIQMLLK*NQ-KRNRTIR 357
K++ L + N NRT R
Sbjct: 304 KLEKLKRENNTPTNRTKR 321
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 258 PPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRE 383
PPT E E + Q + + E+K + E N + W + +
Sbjct: 235 PPTSDEREQVEQRLLLRPSSGMEIKKDLETTNSFVSSWAREQ 276
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 252 PTPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETE 389
P P +EEE +E E P A E + E E ++ + + E E
Sbjct: 343 PVEPEPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEE 388
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 255 TPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETE 389
T T +E E + +E E P TE EP + T + TE
Sbjct: 2974 TTTTTEEPEAVIEEPTTEEPTTTEEPITEEPTEEPTTTEEPTTTE 3018
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 255 TPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETE 389
T T +E E + +E E P TE EP + T + TE
Sbjct: 2974 TTTTTEEPEAVIEEPTTEEPTTTEEPITEEPTEEPTTTEEPTTTE 3018
>Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical
protein C17E4.10 protein.
Length = 414
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 267 DKEEEPLSQESVNENPNATEVKSETEPNNK 356
+KEEE L +E + + PN V+ E N+
Sbjct: 145 EKEEEVLKEEKIIDKPNVETVEEHKENKNE 174
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +3
Query: 138 PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNENPN 317
PV E N P TVE+ V+ + S L DK ++ + EN +
Sbjct: 6932 PVPEANAPTVEPTVEKLAPVESKETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDD 6991
Query: 318 ATEVKSETEPNNKDTND 368
++K E + K ND
Sbjct: 6992 --KLKQEADAKLKKEND 7006
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 147 EENKPAETATVEEPKEVQP-----EF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
++ K AETA++E+ KE + L + K+ E +ESV+E
Sbjct: 9924 QKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEK 9983
Query: 312 PNATEVKSETEPNN 353
P +K +TE ++
Sbjct: 9984 PKKKVLKKKTEKSD 9997
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +3
Query: 138 PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNENPN 317
PV E N P TVE+ V+ + S L DK ++ + EN +
Sbjct: 6952 PVPEANAPTVEPTVEKLAPVESKETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDD 7011
Query: 318 ATEVKSETEPNNKDTND 368
++K E + K ND
Sbjct: 7012 --KLKQEADAKLKKEND 7026
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 147 EENKPAETATVEEPKEVQP-----EF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
++ K AETA++E+ KE + L + K+ E +ESV+E
Sbjct: 9944 QKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEK 10003
Query: 312 PNATEVKSETEPNN 353
P +K +TE ++
Sbjct: 10004 PKKKVLKKKTEKSD 10017
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +3
Query: 138 PVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNENPN 317
PV E N P TVE+ V+ + S L DK ++ + EN +
Sbjct: 6952 PVPEANAPTVEPTVEKLAPVESKETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDD 7011
Query: 318 ATEVKSETEPNNKDTND 368
++K E + K ND
Sbjct: 7012 --KLKQEADAKLKKEND 7026
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 147 EENKPAETATVEEPKEVQP-----EF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNEN 311
++ K AETA++E+ KE + L + K+ E +ESV+E
Sbjct: 9944 QKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEK 10003
Query: 312 PNATEVKSETEPNN 353
P +K +TE ++
Sbjct: 10004 PKKKVLKKKTEKSD 10017
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 255 TPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETE 389
T T +E E + +E E P TE EP + T + TE
Sbjct: 524 TTTTTEEPEAVIEEPTTEEPTTTEEPITEEPTEEPTTTEEPTTTE 568
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = +3
Query: 129 LEPPVAEENKPAETATVEEPKEVQPEF*SXXXXXXXXXXXLPTPPTDKEEEPLSQESVNE 308
+EP KP E T EEP E PT P+ E + E
Sbjct: 471 MEPVDEITQKPTEAPTTEEPTTTTTEE-PTTTTTTEEPTEAPTEPSPTTVEATEASTTPE 529
Query: 309 NPNATEVKS--ETEPNNK 356
++E + +EPN K
Sbjct: 530 ASTSSETSTTENSEPNQK 547
>Z22178-4|CAA80156.1| 359|Caenorhabditis elegans Hypothetical
protein F54C8.4 protein.
Length = 359
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 255 TPPTDKEEEPLSQESVNENPNATEVKSETEP 347
TPP E P +E E+ E ++ETEP
Sbjct: 281 TPPEPSEGTPQEEEEFEEDFEEIEEETETEP 311
>Z82077-1|CAB63330.1| 124|Caenorhabditis elegans Hypothetical
protein W09C5.4 protein.
Length = 124
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 196 FSPNFRVKLKKRIQKMKSYPHHQRIKRKNRSH--KKVSMKIQML 321
+SP + L K++ K++ H+R + + H K+ K+QML
Sbjct: 45 YSPEEAMDLVKQVIKVREQRRHRRHRHHGQKHCGTKIVRKLQML 88
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 273 EEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETELLK 398
EE LSQ+S +E PN KS+T + Q + L++
Sbjct: 1627 EERRLSQKSFDEQPNIPAPKSDTSDYYQLRESLQMTQERLIE 1668
>Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical
protein T28F4.3 protein.
Length = 490
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 130 WNHQLLKRTNLQKQ-QP*KNRKKFSPNFRVKLKKRIQKMKSYPH 258
W+ +LK+ + + +N K++ PN + +++ Y H
Sbjct: 49 WSQNVLKKAKISNMTREFRNNKEYKPNVTTSISEKMMDKNRYRH 92
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/50 (22%), Positives = 28/50 (56%)
Frame = +1
Query: 238 KMKSYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTRTIGSKEKQ 387
K + P ++ KRK +S+KK+ + + + +++ + ++R+R +Q
Sbjct: 794 KFGNMPSYREEKRKRKSNKKIYGALNRITEADERDSTSLRSRDSAGGSQQ 843
>U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical
protein T14A8.2 protein.
Length = 202
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 123 LILEPPVAEENKPAETATVEEPKEVQP 203
++ + P EE+KP E ATV E QP
Sbjct: 134 VLSKEPEVEESKPIEAATVVSAVEDQP 160
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/50 (22%), Positives = 28/50 (56%)
Frame = +1
Query: 238 KMKSYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTRTIGSKEKQ 387
K + P ++ KRK +S+KK+ + + + +++ + ++R+R +Q
Sbjct: 794 KFGNMPSYREEKRKRKSNKKIYGALNRITEADERDSTSLRSRDSAGGSQQ 843
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 190 KKFSPNFRVKLKKRIQKMKSYPHHQRIKRKNRSHK 294
KKF P +R+ K++ QR +RKNR K
Sbjct: 83 KKFEPKYRLVRMGLATKVEKPGRKQRKERKNRQKK 117
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 249 LPTPPTDKEEEPLSQESVNENPNATEVKSETEPNNKDTNDWQQRETE 389
LP D E L + +E P EVKSE + K+ ++++ E
Sbjct: 141 LPAQIIDGMERALLEFGTDEEPAKGEVKSEKKEEKKEEAKKEEKKVE 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,173,380
Number of Sequences: 27780
Number of extensions: 116801
Number of successful extensions: 688
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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