Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O09
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    25   0.42 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   0.97 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.9  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 247 SYPHHQRIKRKNRSHKKVSMKIQMLLK*NQKRNRTIRTR 363
           S   ++  + KNR ++K+  + + LL+    RNR  R+R
Sbjct: 5   SRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSR 43


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 155 VLFSNWWFQD*LWCWCSR 102
           V+F N   +D +WCW +R
Sbjct: 446 VMFFNMVTRDSVWCWDTR 463


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 244 KSYPHHQRIKRKNRSHKKVSMKIQML 321
           ++YPH+Q    K +  K+  M  Q L
Sbjct: 80  ENYPHYQMSGAKQKKKKRSLMGAQGL 105


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 135 PPVAEENKPAETATVEEPKEVQ 200
           PP  +E    E +  EE KEV+
Sbjct: 690 PPQVDEVDDKELSGAEEEKEVE 711


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,678
Number of Sequences: 438
Number of extensions: 1467
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)