Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O08
(292 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 38 0.004
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 38 0.004
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 38 0.004
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 38 0.004
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 38 0.004
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 38 0.004
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 38 0.004
L08238-1|AAA59592.1| 394|Homo sapiens MG44 protein. 30 1.2
AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP respons... 29 2.7
AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B p... 29 2.7
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr... 29 2.7
AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein pr... 29 2.7
AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-... 29 2.7
AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein. 29 2.7
U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silenc... 27 8.3
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 117 GHTYHLGACPVVEPMPGFEMHRLLGIWYVIQKTSTA---SSCITYNFT 251
G +HLG CP F++++ LG WY I+K T CI N++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS 67
>L08238-1|AAA59592.1| 394|Homo sapiens MG44 protein.
Length = 394
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 153 PQRGTLPGGMYAHKRLHRHLTAQLEALVCTF 61
P+ G LPG M RL HL A E+ VC +
Sbjct: 36 PRTGILPGEMAWISRLREHLGATAESQVCAY 66
>AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP response
element binding and betadogene protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 135 PGGMYAHKRLHRHLTAQLEALVC 67
PG MY H ++HR + L A+ C
Sbjct: 195 PGTMYQHIKMHRRILGHLSAVYC 217
>AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B
protein.
Length = 2269
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 135 PGGMYAHKRLHRHLTAQLEALVC 67
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
protein.
Length = 2320
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 135 PGGMYAHKRLHRHLTAQLEALVC 67
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein
protein.
Length = 2269
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 135 PGGMYAHKRLHRHLTAQLEALVC 67
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein
WDR9-form2 protein.
Length = 2199
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 135 PGGMYAHKRLHRHLTAQLEALVC 67
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein.
Length = 2269
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 135 PGGMYAHKRLHRHLTAQLEALVC 67
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silencer
factor protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 187 SNLCISNPGIG-STTGHAPRWYVCP*AAPQTP 95
S LC PG STT AP + P +P+TP
Sbjct: 24 STLCSPTPGPSWSTTAPAPNFTTLPHLSPETP 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,536,567
Number of Sequences: 237096
Number of extensions: 953969
Number of successful extensions: 2027
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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