Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O08
         (292 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    24   0.33 
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    24   0.33 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   0.76 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   0.76 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   1.8  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   2.3  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   3.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   3.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   5.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   7.1  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 104 WSRLWAYIPPGSVPRCGTD 160
           W+R   Y+P G++  CGTD
Sbjct: 190 WNR---YVPEGNMTACGTD 205


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 104 WSRLWAYIPPGSVPRCGTD 160
           W+R   Y+P G++  CGTD
Sbjct: 66  WNR---YVPEGNMTACGTD 81


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 0.76
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 56  IKNVQTNASNCAVRCLWSRLWAYIPPGSVP 145
           IKNV  ++++   + L      Y+PP  +P
Sbjct: 311 IKNVSRDSNSSDFKKLVDNWMTYMPPSGIP 340


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 0.76
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 56  IKNVQTNASNCAVRCLWSRLWAYIPPGSVP 145
           IKNV  ++++   + L      Y+PP  +P
Sbjct: 311 IKNVSRDSNSSDFKKLIDNWMTYMPPSGIP 340


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 260 ICPREIVSYAARCCRSLLYNVPYAE*PVHFKSRHRFHNGARSQ 132
           +  RE  +   R   +L+YN+       +F SR R H+   SQ
Sbjct: 740 VAQRERAADMKRRNGALIYNILPPHVAAYFLSRARHHDDLYSQ 782


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 59  KNVQTNASNCAVRCLWSR 112
           K +  N S CA+RCL  R
Sbjct: 72  KWLSINHSACAIRCLAQR 89


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 166 PGIGSTTGHAPRWYVC 119
           P + STTG +   Y C
Sbjct: 79  PSVASTTGFSKECYCC 94


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 166 PGIGSTTGHAPRWYVC 119
           P + STTG +   Y C
Sbjct: 79  PSVASTTGFSKECYCC 94


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 147 RGTLPGGMYAHKRLHR 100
           RG   GG+Y H+R  R
Sbjct: 8   RGIEHGGLYYHQRCSR 23


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 60  LMIY*TIPNTTVVYGGD 10
           +M+  T+P   VVY GD
Sbjct: 371 VMLTLTLPGIGVVYNGD 387


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 147 VVEPMPGFEMHRLLGIWYVI 206
           +V P P   +H LL + Y++
Sbjct: 38  LVYPEPNPSLHYLLALLYIL 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,593
Number of Sequences: 438
Number of extensions: 1632
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)