Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_O07
         (191 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   1.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   4.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   4.1  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    19   4.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   4.1  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    19   7.1  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    18   9.4  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    18   9.4  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    18   9.4  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    18   9.4  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    18   9.4  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 60  HFFVINMSI*NVVMLF 107
           + FVIN++I N +M+F
Sbjct: 88  NLFVINLAISNFLMMF 103


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 180 LYIVKPTTIIHFLYY 136
           LYIV P T+I+ + +
Sbjct: 50  LYIVLPITVIYAVIF 64


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 129 RNKTIDV*RALRH 91
           +N  +DV +ALRH
Sbjct: 71  KNAEVDVQKALRH 83


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 60  HFFVINMSI*NVVMLF 107
           + FVIN++I + +M+F
Sbjct: 54  NLFVINLAISDFLMMF 69


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 65  LCNQYVDLKCRNAL-YTSIVLFLCL*Y 142
           +CN YVD     A  Y  +++ +C  Y
Sbjct: 807 VCNSYVDASYMIAFAYPIMLIVVCTVY 833


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +1

Query: 25 NENKTMMKPHVC 60
          N  + ++KPH+C
Sbjct: 31 NCKRHVIKPHIC 42


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 181 TIHSKANNY 155
           TIH+  NNY
Sbjct: 89  TIHNNNNNY 97


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 181 TIHSKANNY 155
           TIH+  NNY
Sbjct: 89  TIHNNNNNY 97


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 181 TIHSKANNY 155
           TIH+  NNY
Sbjct: 89  TIHNNNNNY 97


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 181 TIHSKANNY 155
           TIH+  NNY
Sbjct: 89  TIHNNNNNY 97


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 181 TIHSKANNY 155
           TIH+  NNY
Sbjct: 322 TIHNNNNNY 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,397
Number of Sequences: 438
Number of extensions: 964
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)