Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O06
(345 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 186 4e-48
03_01_0547 + 4093196-4093657,4094267-4095148 186 4e-48
03_01_0544 + 4082528-4082989,4083585-4084466 186 4e-48
03_01_0543 + 4076981-4077442,4078145-4079026 186 4e-48
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 109 4e-25
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 109 4e-25
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 69 7e-13
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 62 9e-11
02_04_0462 + 23131433-23132836 50 6e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 49 1e-06
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 1e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 44 4e-05
03_05_0511 + 25056018-25059107 40 5e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 39 0.001
02_04_0148 - 20198407-20201424 39 0.001
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 38 0.002
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 37 0.004
04_01_0103 + 1082077-1082167,1083037-1085477 34 0.034
02_04_0017 + 18937774-18937864,18938505-18940945 34 0.034
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 32 0.14
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 0.18
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 30 0.56
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 30 0.56
01_06_0662 + 30987187-30987277,30987825-30990214 29 0.74
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 3.9
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 3.9
11_06_0412 - 23235670-23236512,23236804-23237838 27 5.2
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 27 5.2
07_01_0220 - 1631395-1631496,1632063-1634036 24 5.9
12_02_1174 - 26696869-26698191 26 6.9
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 26 9.1
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 26 9.1
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 26 9.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 186 bits (453), Expect = 4e-48
Identities = 86/96 (89%), Positives = 88/96 (91%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
DKLKAERERGITIDIALWKFET KYY T+IDAPGHR
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHR 96
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 186 bits (453), Expect = 4e-48
Identities = 86/96 (89%), Positives = 88/96 (91%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
DKLKAERERGITIDIALWKFET KYY T+IDAPGHR
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHR 96
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 186 bits (453), Expect = 4e-48
Identities = 86/96 (89%), Positives = 88/96 (91%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
DKLKAERERGITIDIALWKFET KYY T+IDAPGHR
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHR 96
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 186 bits (453), Expect = 4e-48
Identities = 86/96 (89%), Positives = 88/96 (91%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
DKLKAERERGITIDIALWKFET KYY T+IDAPGHR
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHR 96
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 109 bits (263), Expect = 4e-25
Identities = 46/89 (51%), Positives = 66/89 (74%)
Frame = +2
Query: 77 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 256
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 257 ERGITIDIALWKFETGKYYVTIIDAPGHR 343
ERG+T+ +A+ ET KY V ++D+PGH+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHK 336
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 109 bits (263), Expect = 4e-25
Identities = 46/89 (51%), Positives = 66/89 (74%)
Frame = +2
Query: 77 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 256
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 257 ERGITIDIALWKFETGKYYVTIIDAPGHR 343
ERG+T+ +A+ ET KY V ++D+PGH+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHK 336
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 69.3 bits (162), Expect = 7e-13
Identities = 31/77 (40%), Positives = 51/77 (66%)
Frame = +2
Query: 104 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 283
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 284 LWKFETGKYYVTIIDAP 334
FET TI+DAP
Sbjct: 64 RAHFETETTRFTILDAP 80
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 62.5 bits (145), Expect = 9e-11
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +2
Query: 200 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHK 323
>02_04_0462 + 23131433-23132836
Length = 467
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/96 (32%), Positives = 45/96 (46%)
Frame = +2
Query: 53 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 232
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGH 340
+D ER RGITI+ A ++ET + +D PGH
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGH 143
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 48.8 bits (111), Expect = 1e-06
Identities = 32/93 (34%), Positives = 43/93 (46%)
Frame = +2
Query: 62 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 241
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEAGKAKAVAFDEIDK 107
Query: 242 LKAERERGITIDIALWKFETGKYYVTIIDAPGH 340
E+ RGITI A ++ET K + +D PGH
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGH 140
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.4 bits (110), Expect = 1e-06
Identities = 33/87 (37%), Positives = 44/87 (50%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
NI + H+DSGK+T T ++Y G I E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 260 RGITIDIALWKFETGKYYVTIIDAPGH 340
+GITI A Y V IID PGH
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGH 146
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 43.6 bits (98), Expect = 4e-05
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +2
Query: 74 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 253
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 254 RERGITIDIALWKFETGKYYVTIIDAPGH 340
+ERGITI K+ + IID PGH
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGH 179
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 39.9 bits (89), Expect = 5e-04
Identities = 26/87 (29%), Positives = 39/87 (44%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
N ++ HVD GK+T HL+ CG + G ++ +D L E+
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 260 RGITIDIALWKFETGKYYVTIIDAPGH 340
R IT+ A G + V +ID+PGH
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGH 85
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 39.1 bits (87), Expect = 0.001
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 260 RGITIDIAL----WKFETGKYYVTIIDAPGH 340
RGITI + + Y + +ID PGH
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGH 153
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 38.7 bits (86), Expect = 0.001
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 260 RGITI---DIALWK--FETGKYYVTIIDAPGH 340
R IT+ IAL + + G + V +ID+PGH
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGH 97
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
N+ VI HVD GK+T L+ +CG + +D + ERE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG-------------------ADIPHERAMDSISLERE 106
Query: 260 RGITIDIALWKFETGKYYVTIIDAPGH 340
RGITI + + + ++D PGH
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGH 133
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 260 RGITI 274
RGIT+
Sbjct: 103 RGITV 107
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 33.9 bits (74), Expect = 0.034
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 223
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 224 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGH 340
+ + E ++ + + + +Y + +ID+PGH
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGH 108
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 33.9 bits (74), Expect = 0.034
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 223
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 224 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGH 340
+ + E ++ + + + +Y + +ID+PGH
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGH 108
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 31.9 bits (69), Expect = 0.14
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 247
N+ VI HVD GKST T L+ G I + + + A E +G + K + L
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGI--SLY 78
Query: 248 AERERGITIDIALWKFE----TGKYYVTIIDAPGH 340
E D AL FE Y + +ID+PGH
Sbjct: 79 YE-----MTDAALRSFEGKRDGNSYLINLIDSPGH 108
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.5 bits (68), Expect = 0.18
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 259
NI ++ HVD GK+T ++ + + + + QE ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 260 RGITIDIALWKFETGKYYVTIIDAPGH 340
RGITI + IID PGH
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGH 192
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 29.9 bits (64), Expect = 0.56
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 260 AHARPLVCPIPKRI*RNPYPFPGLPSR 180
A ARP + P+P+R + +PFP P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 29.9 bits (64), Expect = 0.56
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 260 RGITIDIALWKFETGKYYVTIIDAPGHR 343
+G T+++ FET TI+DAPGH+
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHK 42
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.5 bits (63), Expect = 0.74
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 247
N+ V+ HVD GKST T L+ G I + + + + E +G + K + +
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKSTGISLYYE 80
Query: 248 AERERGITIDIALWKFETGKYYVTIIDAPGH 340
E ++ + +Y + +ID+PGH
Sbjct: 81 MSDE---SLKSYKGDRDGNEYLINLIDSPGH 108
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 68 KVHINIVVIGHVDSG 112
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +2
Query: 101 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 280
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 281 AL 286
+
Sbjct: 488 TI 489
>11_06_0412 - 23235670-23236512,23236804-23237838
Length = 625
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 155 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 277
+ K+T++ + A+EM KG + V DKL E ++ + D
Sbjct: 500 VSKKTLQDTVQCAREMLKGCNSFQSVYDKLMEEPQKALVPD 540
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 248 PLVCPIPKRI*RNPYPFPGLPSRTFRWY 165
PL+ P P R+ PF +P+R+F WY
Sbjct: 46 PLL-PSPPRLPPLLVPFAAVPARSFSWY 72
>07_01_0220 - 1631395-1631496,1632063-1634036
Length = 691
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 322 DGDIVFAGFELPESNIDGDTTLTLG 248
D VF+GF +DG T+T G
Sbjct: 27 DDQFVFSGFSGANVTLDGTATVTAG 51
Score = 20.6 bits (41), Expect(2) = 5.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 217 EGTLTHFLGFLLELFDGT 164
+GT T G LLEL +GT
Sbjct: 43 DGTATVTAGGLLELTNGT 60
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 161 KRTIEKFEKEAQEMGK 208
KR EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 50 PKMGKEKVHINIVVIGHVDSGKST 121
P++ + INI IGHV GKST
Sbjct: 52 PEVISRQATINIGTIGHVAHGKST 75
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 259 AWYHHRYCSLEVRNRQILCHHHRR 330
A +HHR S R + HHHRR
Sbjct: 13 AAHHHRLSSSSPAARTRVVHHHRR 36
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 25.8 bits (54), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 200 FPGLPSRTFRWYVCRYH 150
FP +P R FRW+V H
Sbjct: 31 FPPMPIRRFRWWVDELH 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,903,451
Number of Sequences: 37544
Number of extensions: 196994
Number of successful extensions: 563
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -