Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O06
(345 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 206 8e-56
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 206 8e-56
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 86 1e-19
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 53 8e-10
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.33
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.44
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.1
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.1
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 5.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.4
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 5.4
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 20 7.2
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 20 9.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 9.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 206 bits (502), Expect = 8e-56
Identities = 94/96 (97%), Positives = 95/96 (98%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHR
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHR 96
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 206 bits (502), Expect = 8e-56
Identities = 94/96 (97%), Positives = 95/96 (98%)
Frame = +2
Query: 56 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHR
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHR 96
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 86.2 bits (204), Expect = 1e-19
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +2
Query: 227 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 343
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHR
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHR 39
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 53.2 bits (122), Expect = 8e-10
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 275 DIALWKFETGKYYVTIIDAPGHR 343
DIALWKFET KYYVTIIDAPGHR
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHR 23
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.33
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 68 KVHINIVVIGHVDSGKST 121
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.44
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 77 INIVVIGHVDSGKST 121
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 158 DKRTIEKFEKEAQEMG 205
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 158 DKRTIEKFEKEAQEMG 205
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 158 DKRTIEKFEKEAQEMG 205
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 5.4
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 173 RWYVCRYHRIC 141
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 5.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 141 TNAVVSTNVPSKSSRRKPRKWVRVPSNTLGYWTN 242
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 232 YPSVFEGTLTHFLG 191
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 322 DGDIVFAGFELPESNIDGDTT 260
DG I A F + + I GD T
Sbjct: 121 DGHIKIADFGMCKEGISGDKT 141
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 19.8 bits (39), Expect = 9.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 120 QQLVT*STNAVVSTNVPSKSSRRKPRKWVRVPS 218
++L+T VV N+ K S +PR+ + S
Sbjct: 26 KRLITGDEKWVVYNNIKRKRSWSRPRESAQTTS 58
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 325 DDGDIVFAGFELPESNIDGD 266
D+GD +FA +++ +GD
Sbjct: 351 DNGDRIFAEYDIINIQENGD 370
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,752
Number of Sequences: 438
Number of extensions: 1994
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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