Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_O04
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 213 2e-56
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 28 1.8
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 3.1
U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical pr... 27 3.1
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 3.1
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 5.4
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 27 5.4
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 26 7.2
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 26 7.2
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 26 7.2
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 26 7.2
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 26 7.2
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 9.5
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 9.5
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 213 bits (521), Expect = 2e-56
Identities = 94/112 (83%), Positives = 100/112 (89%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHL 208
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E EHL
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQ 364
SSEALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQ
Sbjct: 61 SSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQ 112
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 216 RRWKQAVSVATSTS-----*RTAVKISSTSG*DYTPS 311
RRWK+ V +AT+TS R+ V+ +STS TP+
Sbjct: 504 RRWKKVVPIATNTSVSSSTPRSVVRTTSTSSVPTTPT 540
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 107 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 12
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 107 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 12
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 840 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 869
>U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical
protein C32D5.6 protein.
Length = 578
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 86 SRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEA 220
S+ RG+ + R++++ K +DD+ L L HLS A
Sbjct: 454 SKMVRGIVEDMDRVWEMKKSTCDIDDYCLYYFLKGVALRHLSLHA 498
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 107 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 12
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.6 bits (56), Expect = 5.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 YGLLPAPQNSD--ARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSY 63
Y L P PQ S +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 62 NIDN 51
+ N
Sbjct: 288 DHQN 291
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -3
Query: 154 CRSLFAQVENTDLWVRHT--PTKPRFRIRFILTISITSRWSAPHCVL--HKATL 5
C A + NTD + T P +PRFR ++T T + HC + H AT+
Sbjct: 234 CEQNSATLPNTDQQLSPTLSPNEPRFRN--LITSEPTPSFECKHCTIKFHDATM 285
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 314 HGRGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQN 210
HG G GT R + +CCN +G L P N
Sbjct: 183 HGIGAFGGNKGTGYGR--VPSSCCNEHGKLSYPNN 215
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 53 YRYCKNKPYPKSRFCRGVP--DPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALE 226
Y +C P RFCRG P + ++F VD P+ ++L Y H +A E
Sbjct: 958 YEWCGQ--CPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYL---RYNHSQEQACE 1012
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 53 YRYCKNKPYPKSRFCRGVP--DPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALE 226
Y +C P RFCRG P + ++F VD P+ ++L Y H +A E
Sbjct: 961 YEWCGQ--CPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYL---RYNHSQEQACE 1015
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 53 YRYCKNKPYPKSRFCRGVP--DPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALE 226
Y +C P RFCRG P + ++F VD P+ ++L Y H +A E
Sbjct: 958 YEWCGQ--CPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYL---RYNHSQEQACE 1012
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 89 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALEAGR 235
R C + K I D K+ A ++ + +++ EYE ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 107 PDPKIRIFDLGKKRATVDDFPLCVHLV 187
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 107 PDPKIRIFDLGKKRATVDDFPLCVHLV 187
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 25.8 bits (54), Expect = 9.5
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 273 LPQFFTRYLLQQIRPA--SSASELRCSYSSDTKCTHSGKSSTVALFLP 136
L +FF +L Q+IR A SS S S SS + S SS+ + + P
Sbjct: 212 LMEFFRYFLTQRIRHARDSSGSHESYSGSSSSSSYSSSDSSSYSSYTP 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,336,317
Number of Sequences: 27780
Number of extensions: 194497
Number of successful extensions: 558
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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