Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N22
(106 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 0.60
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 0.80
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 1.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 2.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 2.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 2.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 2.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 2.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 2.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 2.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 2.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 2.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 3.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 3.2
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 20 3.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 3.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 5.6
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 18 9.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 18 9.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 18 9.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 18 9.8
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 18 9.8
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 0.60
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 19 PGQEWPKRNSVQQPKPDVRLDD 84
PG+ WP + ++Q +P R DD
Sbjct: 916 PGRAWPGDSDIRQ-RPIPRSDD 936
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 0.80
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLN 64
NY+ N N+ LY N+N
Sbjct: 96 NYNNNYNNYNKKLYYNIN 113
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 40 RNSVQQPKPDVRLDDSEREEF 102
RNS + P P + D SE E +
Sbjct: 1334 RNSRRTPVPRLAQDSSEDESY 1354
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NYS N N YNN ++
Sbjct: 90 NYSNYNNYNNNNNYNNYKKL 109
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLNRM 70
NY+ N N YNN ++
Sbjct: 333 NYNNNYNNYNNNNYNNYKKL 352
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 2 HEVNYSPGKNGQNETLYNNLNRM 70
H V Y PG+N + L L+R+
Sbjct: 363 HNVVYRPGENPVTQRLPAVLSRI 385
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.8 bits (39), Expect = 3.2
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 1 ARGELQPGQEWPKRNSVQQPKPDVR 75
A+GE G W N PK D R
Sbjct: 800 AQGEKPIGILWNMNNKRLDPKSDSR 824
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 30
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
Frame = -3
Query: 44 FRFG-HSCPGC 15
F +G HSC GC
Sbjct: 19 FHYGVHSCEGC 29
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
Frame = -3
Query: 44 FRFG-HSCPGC 15
F +G HSC GC
Sbjct: 77 FHYGVHSCEGC 87
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 11 NYSPGKNGQNETLYNNLN 64
NY+ N + LY N+N
Sbjct: 339 NYNNNYNNNYKKLYYNIN 356
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -3
Query: 56 CCTEFRFGHSCPG 18
C FG+ CPG
Sbjct: 194 CMAGRLFGYLCPG 206
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 2 HEVNYSPGKN 31
H V Y PG+N
Sbjct: 394 HNVVYRPGEN 403
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 2 HEVNYSPGKN 31
H V Y PG+N
Sbjct: 414 HNVVYRPGEN 423
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 2 HEVNYSPGKN 31
H V Y PG+N
Sbjct: 363 HNVVYRPGEN 372
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/18 (33%), Positives = 9/18 (50%)
Frame = +2
Query: 2 HEVNYSPGKNGQNETLYN 55
+ +Y P Q E L+N
Sbjct: 23 YSASYPPQNRSQEEDLWN 40
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.306 0.129 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,926
Number of Sequences: 438
Number of extensions: 424
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 15
effective length of database: 139,773
effective search space used: 2655687
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.4 bits)
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