Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_N21
         (205 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   0.84 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   1.5  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               19   4.5  
AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced prot...    19   5.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    19   5.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   7.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 0.84
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 5  FGTRWIFT 28
          FGTRWIF+
Sbjct: 62 FGTRWIFS 69


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 144 FICLPFKIFFYKSKHCYRK 88
           F CL  ++F+Y+    Y+K
Sbjct: 275 FGCLSTRLFYYQLTDLYKK 293


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 142 KSPETAKCQR 171
           K+PETA C R
Sbjct: 31  KAPETALCAR 40


>AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 21

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 63  LRSVFSGIIFYNNA 104
           L+ + +G++ Y+NA
Sbjct: 8   LKGILNGVVNYHNA 21


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 23  FTIDFSIEQDF 55
           F +DFS+ +DF
Sbjct: 365 FGMDFSLNEDF 375


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 17  WIFTIDF 37
           WIFTI F
Sbjct: 375 WIFTISF 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,551
Number of Sequences: 438
Number of extensions: 883
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)