Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N19
(308 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 1.1
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 1.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 4.5
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 4.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 4.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 20 5.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 20 5.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.8
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 7.8
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 1.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 272 PCGAFASSPIGTPLHP---LCHRASERGSNWLSLNDSPQLNPVRHLEP 138
P G+ + G L P + + R +WL+ +SP +P L+P
Sbjct: 58 PVGSAVAGTAGGALFPGMAAAGKGAARSDDWLANANSPVGSPSAALQP 105
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 264 SAGSVLTICMLD 299
SAGS+L ICML+
Sbjct: 109 SAGSLLHICMLE 120
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase
domain protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 15 RGVRQDAFLIMNQLLLTFNAMDWR 86
R + Q AF NQL++ + W+
Sbjct: 18 RNLAQQAFAHSNQLIIDKSLKGWK 41
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 203 RGSNWLSLNDS 171
RG+ WLSL++S
Sbjct: 25 RGNTWLSLDNS 35
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 203 RGSNWLSLNDS 171
RG+ WLSL++S
Sbjct: 25 RGNTWLSLDNS 35
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 20.2 bits (40), Expect = 5.9
Identities = 4/9 (44%), Positives = 8/9 (88%)
Frame = +3
Query: 129 IWRWLKVPY 155
+WRW+++ Y
Sbjct: 58 LWRWIRLTY 66
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 20.2 bits (40), Expect = 5.9
Identities = 4/9 (44%), Positives = 8/9 (88%)
Frame = +3
Query: 129 IWRWLKVPY 155
+WRW+++ Y
Sbjct: 96 LWRWIRLTY 104
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 352 IRHKNSAANPPSGYIRSAFGTPI 374
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 352 IRHKNSAANPPSGYIRSAFGTPI 374
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 352 IRHKNSAANPPSGYIRSAFGTPI 374
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 352 IRHKNSAANPPSGYIRSAFGTPI 374
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 352 IRHKNSAANPPSGYIRSAFGTPI 374
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 352 IRHKNSAANPPSGYIRSAFGTPI 374
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 420 IRHKNSAANPPSGYIRSAFGTPI 442
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 299 IQHANGQH*PCGAFASSPIGTPL 231
I+H N P + S GTP+
Sbjct: 420 IRHKNSAANPPSGYIRSAFGTPI 442
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 19.8 bits (39), Expect = 7.8
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 134 PYYCMILHGSA*LFSLPPIHRIERK**LVHYQE 36
P Y + GS +++ HRI K LV + E
Sbjct: 59 PRYPLPYSGSKCTWTITSYHRINLKCSLVEFSE 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,355
Number of Sequences: 438
Number of extensions: 2074
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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