Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N17
(442 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 94 4e-20
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 94 4e-20
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 85 2e-17
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 85 2e-17
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 79 1e-15
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 79 1e-15
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 79 1e-15
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 70 7e-13
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 70 7e-13
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 70 7e-13
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 61 3e-10
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 61 4e-10
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 61 4e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 60 5e-10
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 54 6e-08
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 53 1e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 51 3e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 50 6e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 50 7e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 50 7e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 50 7e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 47 5e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 47 5e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 47 7e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 47 7e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 47 7e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 47 7e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 47 7e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 47 7e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 47 7e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 47 7e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 47 7e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 47 7e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 47 7e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 47 7e-06
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 46 9e-06
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 9e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 45 3e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 5e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 44 5e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 1e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 2e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 8e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 8e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 8e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 39 0.001
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 39 0.001
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 39 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.002
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.002
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.002
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.002
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 37 0.006
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 37 0.006
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 37 0.006
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 37 0.006
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.013
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.023
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 35 0.030
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.040
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.040
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.040
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 34 0.040
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 34 0.053
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 34 0.053
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.070
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.070
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 33 0.12
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 32 0.16
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 0.86
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 29 1.1
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 29 1.1
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 29 1.1
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 2.0
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 28 2.6
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 2.6
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 28 2.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 2.6
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 3.5
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 27 4.6
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 27 4.6
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 6.0
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 94.3 bits (224), Expect = 4e-20
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +1
Query: 178 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 357
D+ + G D K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 358 FKAPDSIDKVMAAGEHTINSKKVDPKKA 441
F P S+DKV+ EH ++ KK+DPK A
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVA 120
Score = 64.1 bits (149), Expect = 4e-11
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 109 FAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDD------DRKLFVGGLSWETSDKELRD 270
F + D LN G D P R +K+F+GGLS ++ ++++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 271 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
+F YG++E + D T R RGF F+ F + + DKV H IN K V+ KKA
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 94.3 bits (224), Expect = 4e-20
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +1
Query: 178 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 357
D+ + G D K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 358 FKAPDSIDKVMAAGEHTINSKKVDPKKA 441
F P S+DKV+ EH ++ KK+DPK A
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVA 120
Score = 64.1 bits (149), Expect = 4e-11
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 109 FAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDD------DRKLFVGGLSWETSDKELRD 270
F + D LN G D P R +K+F+GGLS ++ ++++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 271 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
+F YG++E + D T R RGF F+ F + + DKV H IN K V+ KKA
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +1
Query: 127 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESIN 306
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ YGE+
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 307 VKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
VK D GRSRGFAF+ F + +AA E TI K V+ K A
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Score = 67.3 bits (157), Expect = 5e-12
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 387
+++K+FVGGL + S+++LR HF +G+++ I D T R FAFIVF+ +S DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 388 MAAGEHTINSKKVDPKKA 441
+ + T +++ D KKA
Sbjct: 168 SSQTKQTFGTRECDVKKA 185
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +1
Query: 127 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESIN 306
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ YGE+
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 307 VKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
VK D GRSRGFAF+ F + +AA E TI K V+ K A
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Score = 67.3 bits (157), Expect = 5e-12
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 387
+++K+FVGGL + S+++LR HF +G+++ I D T R FAFIVF+ +S DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 388 MAAGEHTINSKKVDPKKA 441
+ + T +++ D KKA
Sbjct: 168 SSQTKQTFGTRECDVKKA 185
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 79.0 bits (186), Expect = 1e-15
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 151 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 330
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 331 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 98
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPKK 438
F DS+D+ + H +N + D +K
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 79.0 bits (186), Expect = 1e-15
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 151 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 330
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 331 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 98
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPKK 438
F DS+D+ + H +N + D +K
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 79.0 bits (186), Expect = 1e-15
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 151 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 330
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 331 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 98
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPKK 438
F DS+D+ + H +N + D +K
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 70.1 bits (164), Expect = 7e-13
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +1
Query: 214 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 393
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 394 AGEHTINSKKVDPKKA 441
H + K VD K+A
Sbjct: 109 DRPHKLGGKTVDSKRA 124
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 70.1 bits (164), Expect = 7e-13
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +1
Query: 214 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 393
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 394 AGEHTINSKKVDPKKA 441
H + K VD K+A
Sbjct: 129 DRPHKLGGKTVDSKRA 144
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 70.1 bits (164), Expect = 7e-13
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +1
Query: 214 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 393
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 394 AGEHTINSKKVDPKKA 441
H + K VD K+A
Sbjct: 130 DRPHKLGGKTVDSKRA 145
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 190 EAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 369
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 370 DSIDKVMAAGEHTINSKKVD 429
D +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 60.9 bits (141), Expect = 4e-10
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +1
Query: 262 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPKK 438
F DS+D+ + H +N + D +K
Sbjct: 123 TFDDHDSVDQCVLQKSHMVNGHRCDVRK 150
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 60.9 bits (141), Expect = 4e-10
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +1
Query: 262 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 441
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPKK 438
F DS+D+ + H +N + D +K
Sbjct: 123 TFDDHDSVDQCVLQKSHMVNGHRCDVRK 150
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 60.5 bits (140), Expect = 5e-10
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
K+FVGGL + TSDK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 397 GEHTINSKKVD 429
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +1
Query: 118 DITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIE 297
+I N++N G G + D +++GGLS+ S+ ++ FS YGE+
Sbjct: 6 NIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVM 65
Query: 298 SINVKTDPNTGRSRGFAFIVFK 363
+IN+ D +TG+S+GFAF+ +K
Sbjct: 66 NINLIRDKDTGKSKGFAFLCYK 87
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 53.6 bits (123), Expect = 6e-08
Identities = 20/81 (24%), Positives = 44/81 (54%)
Frame = +1
Query: 184 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK 363
+AE + D R ++VG + W+++ E+ +HF+ G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 364 APDSIDKVMAAGEHTINSKKV 426
+S+ + ++K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +1
Query: 181 NSAEAPGRDDD--RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
N AE P +D R LFVG +++ETS+ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 355 VF 360
+
Sbjct: 150 EY 151
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 399
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 400 EHTINSKKVDPK 435
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 34.7 bits (76), Expect = 0.030
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 399
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 400 EHTINSKKVDPK 435
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 34.7 bits (76), Expect = 0.030
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.2 bits (117), Expect = 3e-07
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 145 GNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPN 324
G GGG G++ + + L V LS T++K+LRD F +GEI ++ D
Sbjct: 53 GGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRP 112
Query: 325 TGRSRGFAFIVF 360
+G SRGF FI F
Sbjct: 113 SGNSRGFGFIYF 124
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 50.4 bits (115), Expect = 6e-07
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 211 DRKLFVGGLSWETSDKELRDHFSAY-GEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 387
D +FVG L +E ++ L FSA G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 388 MAAGEHTINSKKVD 429
+A TI +K D
Sbjct: 303 LALSMETIKMEKRD 316
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 31.1 bits (67), Expect = 0.37
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 393
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 31.1 bits (67), Expect = 0.37
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 393
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 31.1 bits (67), Expect = 0.37
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 393
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
++VG ++T+++EL + FS+ G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 49.2 bits (112), Expect = 1e-06
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 190 EAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 369
E D + ++VG + + + +E+ HF G + + ++ D +G +GFA++ F
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEK 129
Query: 370 DSIDKVMAAGEHTINSK--KVDPKK 438
+ + +A + + + KVDPK+
Sbjct: 130 EGMQNALAMTDSLLRGRQIKVDPKR 154
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 47.2 bits (107), Expect = 5e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 184 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVF 360
SA D +FVG L E +K L D FSA+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 361 KAPDSIDKVMAA 396
+ ++ D + A
Sbjct: 150 ASFEASDTALEA 161
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 202 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 381
R+ D ++VGGL + S+ L + G + S+N+ D T +GF F+ F + D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 47.2 bits (107), Expect = 5e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 184 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVF 360
SA D +FVG L E +K L D FSA+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 361 KAPDSIDKVMAA 396
+ ++ D + A
Sbjct: 160 ASFEASDTALEA 171
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 202 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 381
R+ D ++VGGL + S+ L + G + S+N+ D T +GF F+ F + D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 46.8 bits (106), Expect = 7e-06
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 169 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFA 348
D A + DD+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G A
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCA 167
Query: 349 FIVFK 363
F+ +K
Sbjct: 168 FVKYK 172
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.8 bits (106), Expect = 7e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPK 435
F+ P+ + +NSK V K
Sbjct: 363 CFEKPEEATSAVT----EMNSKMVCSK 385
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 274 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
F+ +G I S V T G+S+GF F+ F P+ + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 46.8 bits (106), Expect = 7e-06
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 169 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFA 348
D A + DD+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G A
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCA 167
Query: 349 FIVFK 363
F+ +K
Sbjct: 168 FVKYK 172
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.8 bits (106), Expect = 7e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPK 435
F+ P+ + +NSK V K
Sbjct: 303 CFEKPEEATSAVT----EMNSKMVCSK 325
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 274 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
F+ +G I S V T G+S+GF F+ F P+ + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.8 bits (106), Expect = 7e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPK 435
F+ P+ + +NSK V K
Sbjct: 300 CFEKPEEATSAVT----EMNSKMVCSK 322
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 274 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
F+ +G I S V T G+S+GF F+ F P+ + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.8 bits (106), Expect = 7e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 355 VFKAPDSIDKVMAAGEHTINSKKVDPK 435
F+ P+ + +NSK V K
Sbjct: 363 CFEKPEEATSAVT----EMNSKMVCSK 385
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 274 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
F+ +G I S V T G+S+GF F+ F P+ + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 46.4 bits (105), Expect = 9e-06
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 199 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDS 375
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 376 IDKVMAAGEHTINSKKV 426
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 46.4 bits (105), Expect = 9e-06
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 199 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDS 375
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 376 IDKVMAAGEHTINSKKV 426
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++VG + ++ +++E+ ++F+A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 130 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 294
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 136 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
Query: 295 ESINVKTDPNTGRSRGFAFIVFKAPD 372
E +++KT NT +AF++F+ D
Sbjct: 196 EEVDIKTPINT--DAAYAFVMFQTVD 219
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 214 RKLFVGGL-SWETSDKE-LRDHFSAYGEIESIN 306
R+LFVGGL SW DKE L+ F +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 130 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 294
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 136 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
Query: 295 ESINVKTDPNTGRSRGFAFIVFKAPD 372
E +++KT NT +AF++F+ D
Sbjct: 196 EEVDIKTPINT--DAAYAFVMFQTVD 219
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 214 RKLFVGGL-SWETSDKE-LRDHFSAYGEIESIN 306
R+LFVGGL SW DKE L+ F +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 130 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 294
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 113 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 172
Query: 295 ESINVKTDPNTGRSRGFAFIVFKAPD 372
E +++KT NT +AF++F+ D
Sbjct: 173 EEVDIKTPINT--DAAYAFVMFQTVD 196
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 214 RKLFVGGL-SWETSDKE-LRDHFSAYGEIESIN 306
R+LFVGGL SW DKE L+ F +G +E+I+
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
++VG ++T++ +L ++FS G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 163 GGDGQDNSAEAPGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSR 339
G DG+ A RD L V G+ ++T+D+ + +F G + +K + G S+
Sbjct: 155 GRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSK 213
Query: 340 GFAFIVFKAPDSIDKVMAAGEHTINSKKVDPK 435
GF F+ + +KV+A +H I+ ++ D K
Sbjct: 214 GFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVK 245
Score = 36.7 bits (81), Expect = 0.007
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 169 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFS--AYGEIESINVKTDPNTGRS-R 339
DG+D GR ++FVG L+ + + +LR F A IE+ V TD + R
Sbjct: 248 DGRDKQ----GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFR 302
Query: 340 GFAFIVFKAPDSIDKVMAAGEHTINSKKV 426
GFAF+ + ++ +++++ G T+N V
Sbjct: 303 GFAFVTLSSAEAAERIVSKGSLTVNGLSV 331
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI 378
D R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F +S+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 193 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 372
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ D
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 373 SIDK 384
K
Sbjct: 179 DAQK 182
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI 378
D R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F +S+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 193 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 372
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ D
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 373 SIDK 384
K
Sbjct: 324 DAQK 327
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 199 GRD-DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
G D R +FVG +S++ S+ +R FS G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 154 EHGGGDGQDNSAEAPGRD---DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPN 324
EHG + E R+ + +LF+ L + T + +L+ F YGE+ + V D
Sbjct: 256 EHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK 315
Query: 325 TGRSRGFAFIVFKAPDS 375
TG +GFA + F P++
Sbjct: 316 TGACKGFAIVEFVFPEA 332
Score = 40.3 bits (90), Expect = 6e-04
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
+L V L ++++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 397 GEHT-INSKKV 426
T NSKK+
Sbjct: 63 SNQTFFNSKKL 73
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 387
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/116 (18%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +1
Query: 97 NNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRK------LFVGGLSWETSDK 258
+N +F +I ++ + ++ +++A P ++++K +F+G + + ++ +
Sbjct: 10 SNSHFEMEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIE 69
Query: 259 ELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKV 426
E+ +HF G+I + D T + + FA+I F SI+ + S+ +
Sbjct: 70 EIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPI 125
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 387
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 7e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 202 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 381
R D+ V L E ++ ELRD F G + I + D TG +GFAF+ F++ D
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 382 KVMA 393
+ +A
Sbjct: 232 RAIA 235
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 166 GDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGF 345
G G D A AP + L + LS++T+ +LR F YG+I +++ D + +S+GF
Sbjct: 4 GGGGDRRA-APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Query: 346 AFIVF 360
F+ F
Sbjct: 63 GFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 166 GDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGF 345
G G D A AP + L + LS++T+ +LR F YG+I +++ D + +S+GF
Sbjct: 4 GGGGDRRA-APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Query: 346 AFIVF 360
F+ F
Sbjct: 63 GFVRF 67
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 214 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
R L+VGG + + ++K L F +G++ +I++ D +G+ RGF F+ F
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/116 (18%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +1
Query: 97 NNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRK------LFVGGLSWETSDK 258
++++F +I ++ + ++ +++A P ++++K +F+G + + ++ +
Sbjct: 16 SSNSFEMEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIE 75
Query: 259 ELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKV 426
E+ +HF G I + D T + + FA+I F SI+ + S+ +
Sbjct: 76 EVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPI 131
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 393
+FVG LS + S++ L+ F+ +GE+ V D T +S+G+ F+ F + + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIA 194
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINV 309
D+ ++VG +S +T+D +LRD FS YG+I + +
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 39.9 bits (89), Expect = 8e-04
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 196 PGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + +S
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 376 IDKVMAA-GEHTINSKKVDPKKA 441
+K AA E + + ++ ++A
Sbjct: 103 CEKARAALHESHVQGRIIEVRRA 125
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.9 bits (89), Expect = 8e-04
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRG 342
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 39.9 bits (89), Expect = 8e-04
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 196 PGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + +S
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 376 IDKVMAA-GEHTINSKKVDPKKA 441
+K AA E + + ++ ++A
Sbjct: 103 CEKARAALHESHVQGRIIEVRRA 125
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 399
+FV + E ++ ++ D FS YG+I++I++ D TG +G+A + ++ ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 400 EHT 408
T
Sbjct: 117 NDT 119
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 390
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + + ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P +
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 160
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 375
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P +
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 205 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 385 VMA 393
+A
Sbjct: 347 AIA 349
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 205 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 385 VMA 393
+A
Sbjct: 347 AIA 349
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 205 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 385 VMA 393
+A
Sbjct: 322 AIA 324
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 205 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 385 VMA 393
+A
Sbjct: 325 AIA 327
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 178 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 357
D S + D R+L V + ++ + +L F G + ++V+ N S+GF F+
Sbjct: 88 DRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVT 145
Query: 358 FKAPDSIDKVMAA-GEHTINSKKVD 429
+ PD D+ A TI ++V+
Sbjct: 146 MQNPDDADRARAEFNGTTIEGRRVE 170
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 178 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 357
D S + D R+L V + ++ + +L F G + ++V+ N S+GF F+
Sbjct: 88 DRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVT 145
Query: 358 FKAPDSIDKVMAA-GEHTINSKKVD 429
+ PD D+ A TI ++V+
Sbjct: 146 MQNPDDADRARAEFNGTTIEGRRVE 170
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 232 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 411
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 412 NSKKVD 429
S+ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 232 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 411
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 412 NSKKVD 429
S+ ++
Sbjct: 68 GSRYIE 73
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.9 bits (79), Expect = 0.013
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 369
+ + +F+ LS++T ++ +++ S +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.1 bits (77), Expect = 0.023
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 163 GGDGQDNSAEAPG-RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSR 339
GG D A G +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 340 GFAFIVF 360
G+AF+ +
Sbjct: 242 GYAFVTY 248
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 34.7 bits (76), Expect = 0.030
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +1
Query: 142 NGNSEHGGGDGQDNSA---EAPGRDD-----DRKLFVGGLSWETSDKELRDHFSAYG 288
N EHG + ++ E P RD RK+FVGG+ W+ ++ L+D F +G
Sbjct: 263 NFQQEHGNKNRDSDATWFGELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.040
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.040
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.3 bits (75), Expect = 0.040
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.040
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSIDKVMAA 396
L + L + +E+R F++ GEIES + D TG+S G+ F+ + + D++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 397 GEHTINSKKV 426
+ +K +
Sbjct: 104 NGLRLQNKTI 113
Score = 33.9 bits (74), Expect = 0.053
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 381
L+V G+ + EL F +G+I + + +D TG S+G F+ F D D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 33.9 bits (74), Expect = 0.053
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 193 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGR-SRGFAFIVFK 363
APG +D R +FV L + T++ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIR---QAIEGVASIRFARKANSDLVHRGFAYVVME 640
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.053
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +1
Query: 130 DNQLNGNSEHGGGDGQDNSA-EAPGRDDDRK-LFVGGLSWETSDKELRDHFSAYGEIES- 300
D +G GGG N + GR + ++ +FV G+S ++ + D FS G+I
Sbjct: 171 DGPPSGGGYGGGGAASGNREFGSDGRVELKETVFVQGISTTANEAYIADVFSTCGDIAKN 230
Query: 301 -----INVKTDPNTGRSRGFAFIVF 360
I + TD NTG +G I F
Sbjct: 231 DRGPRIKIYTDRNTGEPKGECMITF 255
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 33.5 bits (73), Expect = 0.070
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKELRDHFSAYGEIESI-----NVKTD-----PNTGRSRGFAFIV 357
DDRK+ V +S + + +L+ FS YG+I S KT P R+ G A I
Sbjct: 110 DDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATIT 169
Query: 358 FKAPDSIDKVMAA 396
FK + D+ A
Sbjct: 170 FKKSEHADRAKNA 182
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.5 bits (73), Expect = 0.070
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 175 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 354
Q+ A+ P + +R L++ L ++ + +E+ + F +G + I V NT +RG AF+
Sbjct: 7 QNRGAKLPP-EVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFV 62
Query: 355 VFK 363
V++
Sbjct: 63 VYE 65
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Frame = +1
Query: 208 DDRKLFVGGLSWET-------SDKELRDHFSAYGEIESI----NVKTDPNTGRSRGFAFI 354
++RK+++GG++ E ++ E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 355 VFKAPDSIDKVMAA 396
+ + + A
Sbjct: 384 TMRNKAGVKAIFEA 397
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.16
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = +1
Query: 208 DDRKLFVGGLSWETSDKEL-RDHFSAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 363
++R+++VG + ++ ++KEL D + Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.28
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 205 DDDRKLFVGGLSWETSDKELRDHFSA-YGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 381
D R +F+GG+ T ++L YG++ + + DP +G A + F +
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 382 KVMAAG----EHTINSKKVDPK 435
+ ++ H N+K+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 214 RKLFVGGLSWETSDKELRDHFSAYGEI 294
RK+F+GGL + S++++ F A+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 31.1 bits (67), Expect = 0.37
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 124 TTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI 303
T + + NS GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 304 N--VKTDPNTGRSRGFAFIVFKAPDSI 378
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 0.86
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 163 GGDGQDNSAEAPGRDDDRK 219
GGDGQ NSA+ DDDR+
Sbjct: 894 GGDGQTNSADVTVNDDDRE 912
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 375
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 376 IDKVMAA 396
+ K+M+A
Sbjct: 266 VIKLMSA 272
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 375
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 376 IDKVMAA 396
+ K+M+A
Sbjct: 266 VIKLMSA 272
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 375
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 376 IDKVMAA 396
+ K+M+A
Sbjct: 266 VIKLMSA 272
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 397 GEHTINSKKV 426
H +N K++
Sbjct: 54 --HDLNGKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 397 GEHTINSKKV 426
H +N K++
Sbjct: 54 --HDLNGKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 397 GEHTINSKKV 426
H +N K++
Sbjct: 54 --HDLNGKEL 61
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 76 KII*VMANNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 255
KI + N+ + ++ DNQ +E +NS E + R +++ G S +T
Sbjct: 66 KIANAVKNSGSGIISVSEDNQKIRRNEEN--PVPENSLEYWQKIKHRTVYMKGFSTDTQL 123
Query: 256 KELRDHFSAYGEIESINV-KTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
++ + +GE E++ + + P +G FI +K + + A
Sbjct: 124 DDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTREEAEAAQKA 171
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 223 FVGGLSWETSDKELRDHFSAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPDSIDKVM 390
+VG L W T+D +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEI 294
+LFVG L E + EL++ FS +G+I
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEI 294
+LFVG L E + EL++ FS +G+I
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEI 294
+LFVG L E + EL++ FS +G+I
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 214 RKLFVGGLSWETSDKELRDHFSAYGEIE 297
RK+FVGGL + ++ + FS YG ++
Sbjct: 88 RKVFVGGLPSCVKESDILNFFSRYGRLQ 115
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 100 NDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 255
ND + + +N N N+ +GG G N+ G +++ G +WE+++
Sbjct: 430 NDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNN-GNDGNNWESNN 480
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 100 NDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 255
ND + + +N N N+ +GG G N+ G +++ G +WE+++
Sbjct: 430 NDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNN-GNDGNNWESNN 480
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 27.5 bits (58), Expect = 4.6
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +1
Query: 91 MANNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVG-GLSWETSDKELR 267
M+ ND + I N+LNG+ +H + E +D+D +E S+++L+
Sbjct: 155 MSQNDEQNEKIIEKNKLNGDQDHNDVMNRLEELEKLEQDNDEMEEAPIPKPFEVSNEDLQ 214
Query: 268 DHFSAYGEIESI-NVKTDPNTGRSR 339
D G++E + V+ DP + R
Sbjct: 215 D----LGKLEEVEEVEQDPTDKKLR 235
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 220 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 360
L+VG LS+ T + ++ + F G++ + + D GF F+ +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEY 85
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +1
Query: 217 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 396
++++G L SD+++ F YG++ + +K GF F+ F+ D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMK--------NGFGFVDFQDQRDADDAV-- 52
Query: 397 GEHTINSKKV 426
H +N K++
Sbjct: 53 --HDLNGKEL 60
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 208 DDRKLFVGGLSWET-SDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 384
+ ++LFV + + KEL+ +F AYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 385 VM 390
++
Sbjct: 87 LL 88
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 88 VMANNDNFAQDITTDNQLNGNS 153
VM NND+FAQ + + N + NS
Sbjct: 93 VMQNNDSFAQHMQSSNTIEYNS 114
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 88 VMANNDNFAQDITTDNQLNGNS 153
VM NND+FAQ + + N + NS
Sbjct: 79 VMQNNDSFAQHMQSSNTIEYNS 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,933,286
Number of Sequences: 27780
Number of extensions: 202079
Number of successful extensions: 826
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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