Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N16
(409 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 176 1e-45
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 176 1e-45
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.091
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 28 0.49
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 0.85
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 27 1.5
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 1.5
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 6.0
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 25 6.0
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 6.0
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 24 7.9
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 24 7.9
SPAC19D5.02c |||peroxisomal membrane protein Pex22 |Schizosaccha... 24 7.9
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 24 7.9
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 24 7.9
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 176 bits (428), Expect = 1e-45
Identities = 84/130 (64%), Positives = 102/130 (78%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKSLVKNAIVVVDATPFRQWYESH*LLP 373
D+GNF+WGSE ++KTRII V Y+ SNNELVRT +L K+AIV +DA PFR WYE+H +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 374 LGRKKGAKLT 403
+G KG K T
Sbjct: 121 MG-SKGKKAT 129
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 176 bits (428), Expect = 1e-45
Identities = 84/130 (64%), Positives = 102/130 (78%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKSLVKNAIVVVDATPFRQWYESH*LLP 373
D+GNF+WGSE ++KTRII V Y+ SNNELVRT +L K+AIV +DA PFR WYE+H +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 374 LGRKKGAKLT 403
+G KG K T
Sbjct: 121 MG-SKGKKAT 129
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 30.7 bits (66), Expect = 0.091
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 26 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 199
RD +K + G K+ + EL +N + Q+ L+ S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 200 GNFAWGSECSTRKTRI 247
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 28.3 bits (60), Expect = 0.49
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +2
Query: 107 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 286
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 287 RTKSLVKNAIVVVDATPFRQWYE 355
S ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 0.85
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 116 WQPGDLTHTSSSYEWAHVC 60
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 1.5
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = -2
Query: 399 SLAPFF---LPSGSS*WLSYHCLKGVASTTTIAFFTKLLVRTNSLLEAL*TTSIIRVLRV 229
++A FF L + S W Y C++ TT + L + ++EAL S++ L
Sbjct: 503 NIALFFANLLSTDSIGWEVYDCVRLTEDDTTASSRIFLKIMFQEIVEALGLKSLVERLHD 562
Query: 228 EHSDP--HAKFPVSRRR 184
+ P H FPV R
Sbjct: 563 PNLVPYLHGLFPVDEAR 579
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 1.5
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +2
Query: 29 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 199
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 200 GNFAWGSECSTRKTRIIDVVYNASNN 277
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 24.6 bits (51), Expect = 6.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 319 DNSILYQALGTHQFIVRGIINNI 251
+NS+ +Q+ +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 24.6 bits (51), Expect = 6.0
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 168 LPPRDLTKWMRWG-PSL 121
L P+D+ KW RW PSL
Sbjct: 32 LSPQDILKWCRWTLPSL 48
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 6.0
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 29 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 208
+ W K T K+ +KRK L R A +L + + + S+GG +A + ++
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAKKNSSLD 90
Query: 209 AWGSE 223
A+ +E
Sbjct: 91 AFLNE 95
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 24.2 bits (50), Expect = 7.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 273 LEAL*TTSIIRVLRVEHSDPHAKFPVSRR 187
LE + T S +V R H DP K P RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 24.2 bits (50), Expect = 7.9
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 210 AKFPVSRRRA-RYLVLPPRDLTKW 142
AK P+ +RR + L+L RDLT W
Sbjct: 420 AKKPILKRRTPQELLLSGRDLTPW 443
>SPAC19D5.02c |||peroxisomal membrane protein Pex22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 223
Score = 24.2 bits (50), Expect = 7.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 352 IPLPERRGIHHDNSILYQALGTHQFIVRGIINNINNTSLAG*TFRSPCEVSSIKT 188
I +PE D+ I + L F+ G+ + NT LAG S ++ IKT
Sbjct: 40 IDIPEMTFRPSDSQIDWSNLSHSDFVQCGVYEDSTNTWLAG---ASKYKIDEIKT 91
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 24.2 bits (50), Expect = 7.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 5 EAKMGISRDHWHKRRATGGKRAPIRK 82
EAK G D H+R GKR I K
Sbjct: 370 EAKWGFRLDDIHRRTCFNGKRLYITK 395
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 24.2 bits (50), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 214 PCEVSSIKTQGTIFSVTTTGSD 149
P V+SIK GT FS G+D
Sbjct: 768 PTAVASIKVSGTEFSTLLHGND 789
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,833,503
Number of Sequences: 5004
Number of extensions: 37575
Number of successful extensions: 94
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 140222766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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