Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_N15
         (388 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00043-6|AAC77507.1|  487|Caenorhabditis elegans Hypothetical pr...    75   1e-14
AF022967-12|AAB69873.2|  467|Caenorhabditis elegans Hypothetical...    27   3.5  
Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    27   4.6  
AC006675-1|AAK84559.1|  334|Caenorhabditis elegans Serpentine re...    27   4.6  
Z93385-7|CAN86625.1|  556|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    27   6.1  
U29488-2|AAA68774.2|  422|Caenorhabditis elegans Hypothetical pr...    26   8.1  

>U00043-6|AAC77507.1|  487|Caenorhabditis elegans Hypothetical
           protein T26A5.4 protein.
          Length = 487

 Score = 75.4 bits (177), Expect = 1e-14
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
 Frame = +1

Query: 22  HALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPL-DYNKG-PQLLQYVAKTIWQ 195
           HA  LA+ GF V +I + ++ P  +I  +P I+I  + P  D+    P  +Q   K  W 
Sbjct: 32  HAKMLADEGFDVKLIGFFDSIPGEQIMNHPRIKIVGIPPPPDFMDSLPAFVQLPLKLFWN 91

Query: 196 SISLLLTLFISGKCHYL---LCQNPPAIPTLPICSVYCLVARVQLIIDWHNYGYSLM 357
            I+L L L        L   L QNPPA+PT+ +C ++ +    +  IDWHNY YS++
Sbjct: 92  FITLFLALAFQTSAFNLRIILMQNPPALPTMIVCFMFSIFKFAKFSIDWHNYMYSIL 148


>AF022967-12|AAB69873.2|  467|Caenorhabditis elegans Hypothetical
           protein C13A2.1 protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 58  NIITYVETTPLTEITENPNIQISKLHPLDYN 150
           N+IT+++T    +I E+PN +   + PL YN
Sbjct: 320 NVITHIKTVDWVDIIEDPN-EKQVVEPLYYN 349


>Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical
           protein K05C4.9 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 115 IQISKLHPLDYNKGPQLLQYVAKTIWQSISLLLTLFIS 228
           + ++ +H  D+  G    QY+  +IW +I  L+TL +S
Sbjct: 418 VLLNFIHNFDH-LGSNFTQYLRNSIWSAIQTLVTLDLS 454


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 75  GNYTAHRNNRKPQYSNFKTASIRLQQRPSITSIC 176
           G Y+    N  P YS +K   ++  + PS+ + C
Sbjct: 221 GQYSTQTTNNYPPYSLYKVEELKRDRIPSMAARC 254


>AC006675-1|AAK84559.1|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein33 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 292 HCIWVMLEWLVGS 254
           HC W+  EWL GS
Sbjct: 55  HCFWITCEWLSGS 67


>Z93385-7|CAN86625.1|  556|Caenorhabditis elegans Hypothetical
           protein M01E5.3b protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 60  HYYLCGNYTAHRNNRKPQYSNFKTASIRLQQR 155
           HY    N  AH+  R+P ++NF  A   + QR
Sbjct: 426 HYRRHMNAQAHQQQREPSWNNFANAPPAIIQR 457


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +1

Query: 67  TYVETTPLTEITEN--PNIQISKLHPLDYNKGPQLLQYVAKTIWQSISLLLTLFISGKCH 240
           TY+ T P   + EN   N   + ++ + +N     +    K +W      +T  +S    
Sbjct: 560 TYINTIPSMTLIENNLTNFSFNNINSM-FNCELPTIPASPKLLWPFSRKSITCNLSDCVL 618

Query: 241 YLLCQNPPAIPTLPICSVYC 300
                 P A   L +CS+YC
Sbjct: 619 LTFVCIPSAFANLLLCSLYC 638


>U29488-2|AAA68774.2|  422|Caenorhabditis elegans Hypothetical
           protein C56C10.6 protein.
          Length = 422

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 189 MAKHKFAFNLIYKWKMPLFAV-SEPTSHSNIT 281
           M+K KFA+N  + W+MP+    S+ T   ++T
Sbjct: 294 MSKGKFAWNDPFDWEMPISTTPSKSTPSKSVT 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,349,141
Number of Sequences: 27780
Number of extensions: 193957
Number of successful extensions: 516
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)