Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N13
(274 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0200 + 13744735-13745037,13745071-13745610,13745704-137458... 31 0.095
12_01_0436 - 3436886-3437559,3438738-3438924 31 0.13
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 0.67
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090... 28 0.89
01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336... 28 1.2
12_01_0034 - 288931-289201,289284-289398,289524-289639,289805-28... 27 1.5
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 27 1.5
04_03_0343 + 14683782-14684222 27 2.0
10_08_0481 - 18209452-18209602,18209918-18210012 27 2.7
02_05_0879 - 32444967-32445250,32445643-32445674,32445752-324458... 27 2.7
12_01_0395 - 3117315-3118117,3118354-3118478,3118558-3118770,311... 26 3.6
04_01_0381 - 5061901-5061914,5062044-5062100,5062268-5063231 26 4.7
03_02_0678 + 10346785-10347149,10347665-10347727,10348445-10349477 26 4.7
11_03_0128 - 10437407-10438049,10438097-10438272 25 6.3
03_05_1060 - 30023407-30023553,30024274-30024390,30024958-300251... 25 6.3
03_03_0127 - 14669451-14670058,14671349-14672240 25 6.3
02_03_0403 + 18636953-18637004,18637088-18637299,18638852-186389... 25 6.3
01_06_1081 + 34394971-34395139,34395261-34395310,34396057-34396365 25 6.3
10_08_0445 + 17989438-17990895 25 8.3
09_01_0031 - 539564-539601,540458-540596 25 8.3
08_01_0376 - 3320621-3321151 25 8.3
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 25 8.3
01_07_0110 - 41134504-41135763 25 8.3
01_07_0108 - 41126074-41127342 25 8.3
>01_03_0200 +
13744735-13745037,13745071-13745610,13745704-13745862,
13748992-13749123,13749282-13749472,13749541-13749792,
13750248-13750323,13750411-13750602,13750688-13750689,
13753230-13753287,13753736-13754941
Length = 1036
Score = 31.5 bits (68), Expect = 0.095
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 150 RHTFTAPRVKKGKTPTATVGTSTNMQEHEEV-FYTIP 257
++T VKKGKTP T G T++Q E V F T+P
Sbjct: 18 KNTLNTQYVKKGKTPFKTYGKITSLQWDEFVKFKTLP 54
>12_01_0436 - 3436886-3437559,3438738-3438924
Length = 286
Score = 31.1 bits (67), Expect = 0.13
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 154 CLMSPGAQSPGLGWPFKNPSAW 89
CL P + G+GWP +P+AW
Sbjct: 249 CLWQPESGGGGMGWPATSPAAW 270
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 0.67
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 223 MLVDVPTVAVGVLPFFTRGAVNVCLMS 143
+ V + +V VGVL F+ GA N+C MS
Sbjct: 229 LTVPLASVLVGVLVFYYTGARNLCCMS 255
>01_07_0106 -
41107673-41107942,41108362-41108574,41108877-41109041,
41109431-41109649,41110205-41110324,41110427-41110489,
41111034-41111606,41111691-41111858,41112414-41112495,
41112667-41112743,41113031-41113101,41114315-41114363
Length = 689
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = -1
Query: 181 FFTRGAVNV---CLMSPGAQSPGLGWP 110
FF RG V + C+M+P Q GLG P
Sbjct: 460 FFIRGCVTILVPCVMAPSNQGQGLGHP 486
>01_05_0078 +
17931998-17932062,17933320-17933416,17933506-17933601,
17933957-17933988,17935143-17935595,17935831-17935975,
17936058-17936159,17937798-17937890,17939448-17939489,
17940092-17940202,17940446-17940517,17940596-17940714,
17940981-17941044,17941133-17942782
Length = 1046
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 EPDQAEG-FLKGQPRPGDCAPGDMRHTFTAPRVKKGKTPTATVGTSTNMQEHEEVF 245
+PD+ + FLK P+P C D T P ++GK +ST+ + + F
Sbjct: 183 KPDKKKARFLKDTPQPDPCLLKDASTGITKPAKEQGKLLVTMPSSSTSTKIPQSSF 238
>12_01_0034 -
288931-289201,289284-289398,289524-289639,289805-289939,
290062-290129,290374-290484
Length = 271
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 223 MLVDVPTVAVGVLPFFTRGAVNVCLMS 143
+ V + +V +GVL F+ GA N+C MS
Sbjct: 226 LTVPLASVLIGVLVFYYIGARNLCCMS 252
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 145 SPGAQSPGLGWPFKNPSAWSGSL 77
+PG Q+PG+ WP PS + L
Sbjct: 63 TPGHQTPGVAWPSPYPSGGASPL 85
>04_03_0343 + 14683782-14684222
Length = 146
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 118 GWPFKNPSAWSGSLADRDRSKA 53
GWP +P+A SG RDR +A
Sbjct: 120 GWPLGSPAAHSGGGDGRDRKEA 141
>10_08_0481 - 18209452-18209602,18209918-18210012
Length = 81
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 130 SPGLGWPFKNPSAWSGSLADRDRSK 56
SP L WP +P+ +G +A R+R +
Sbjct: 8 SPDLAWPRPDPAEAAGVVAQRERRR 32
>02_05_0879 -
32444967-32445250,32445643-32445674,32445752-32445809,
32445840-32445913,32446004-32446088,32447054-32447735
Length = 404
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 60 LRSLSAREPDQAEGFLKGQPRPGDCAPGDMRHTFTAPRVKKGKTPTATVGTSTNMQEHEE 239
L LSA P +A G + P P +P +FT P+V P +V + M + +
Sbjct: 332 LPPLSAPGPAEAGGAI---PPPNSGSPSVQGGSFTLPKVSTANGPAGSVSEAPWMNKPHQ 388
Query: 240 V 242
+
Sbjct: 389 I 389
>12_01_0395 -
3117315-3118117,3118354-3118478,3118558-3118770,
3118850-3120076,3120537-3120622,3121197-3121223
Length = 826
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 87 DQAEGFLKGQPRPGDCAPGDMRHTFTAPRVKKGKTPTATVGTSTNMQEHEEVFYTIPL 260
D+ E +KG G CAP D+ +T + K + + +++ +H+ Y+ P+
Sbjct: 385 DEEEEVIKGSTTTG-CAPNDVANTASQHVDAKDHHLQSRMAFASDFTKHQYYIYSEPM 441
>04_01_0381 - 5061901-5061914,5062044-5062100,5062268-5063231
Length = 344
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 220 LVDVPTVAV-GVLPFFTRGAVNVCLMSPGAQSP 125
L +PT+ + G+LP ++ + L SPGAQ P
Sbjct: 188 LPQLPTIQIPGLLPLPPLPSIPITLGSPGAQIP 220
>03_02_0678 + 10346785-10347149,10347665-10347727,10348445-10349477
Length = 486
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 148 MSPGAQSPGLGWPFKNPSAWSGSLADRDRSK 56
+SPG G+GWP A++ D+S+
Sbjct: 401 LSPGGSCSGIGWPGNVSYAFNNFYQQHDQSE 431
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 218 SRCPNSCRWCLTFLYSWGSKCVSHVTRST 132
SRCP+ + L SWGS C SH++ T
Sbjct: 230 SRCPSPTASSES-LGSWGSGCRSHLSSPT 257
>03_05_1060 -
30023407-30023553,30024274-30024390,30024958-30025129,
30026116-30026198,30026299-30026917,30027157-30027280,
30027637-30027745,30028214-30028399,30028716-30028763,
30028808-30028979,30029034-30029209
Length = 650
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 166 AVNVCLMSPGAQSPGLGWPFKNP 98
A N +S G +SPGL WP+ P
Sbjct: 355 AANRAPVSGGRRSPGLKWPWLCP 377
>03_03_0127 - 14669451-14670058,14671349-14672240
Length = 499
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 178 FTRGAVNVCLMSPGAQSPGLGWPFKNPSAWSGSLADRD 65
+T A+ V +SP A G P P W + AD+D
Sbjct: 186 WTAVALGVASLSPFALMFGAALPKIRPRRWRATAADKD 223
>02_03_0403 +
18636953-18637004,18637088-18637299,18638852-18638911,
18639078-18639158,18639273-18639473,18639575-18639670,
18639780-18639976,18640067-18640295
Length = 375
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 135 APGDMRHTFTAPRVKKGKTPTATVGTSTNMQE 230
A G RH P++K+ T GT N+ E
Sbjct: 273 ARGIFRHPAAVPKIKEANLSLLTYGTLNNVPE 304
>01_06_1081 + 34394971-34395139,34395261-34395310,34396057-34396365
Length = 175
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 1 ARGRGAENQRVRGVKSSEPYCGLYQQENPTKQKD 102
AR RG+ RG SS GLY++ +P ++
Sbjct: 141 ARRRGSGTSEPRGTASSSAGPGLYRKPSPPPSEE 174
>10_08_0445 + 17989438-17990895
Length = 485
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 120 RPGDCAPGDMRHTFTAPRVKKGKTPTATVGTS 215
RPGDC+P D+ ++ + A VG +
Sbjct: 158 RPGDCSPRDVSKALAGVVLQTPRGAAAAVGAA 189
>09_01_0031 - 539564-539601,540458-540596
Length = 58
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 120 RPGDCAPGDMRHTFTAPRVKKGKTPTATVGTSTN 221
+PG G+ RH P V KGK V T+++
Sbjct: 23 KPGGGELGEYRHVDVYPGVVKGKRGVMRVSTASS 56
>08_01_0376 - 3320621-3321151
Length = 176
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 238 SSCSCMLVDVPTVAVGVLPFFTRGAVNVCLMSPGAQSPGLGWPFKNPS 95
S C C+++ P V V L R A +CL + G +P L P ++P+
Sbjct: 5 SVCYCVILPQPLVLVLQLLDLLRHAFLLCLSALGLAAPPL--PDEHPA 50
>03_05_0530 -
25306788-25306919,25307446-25308037,25308152-25308975,
25309533-25309592,25310115-25310180,25310318-25310461,
25310616-25310756,25310898-25311056,25311818-25311884,
25311986-25312158,25312237-25312333,25312410-25312528,
25312867-25312951,25313120-25313321,25314456-25314633
Length = 1012
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 238 SSCSCMLVDVPTVAVGVLPFF 176
S C C+ + V V VG++P+F
Sbjct: 244 SICCCLYMMVSVVIVGLVPYF 264
>01_07_0110 - 41134504-41135763
Length = 419
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 117 PRPGDCAPGDMRHTFTAPRVKKGKTPTATV 206
P G CA G++ HT GK P V
Sbjct: 122 PVTGQCAAGNLAHTRFIANTTDGKNPLIQV 151
>01_07_0108 - 41126074-41127342
Length = 422
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 126 GDCAPGDMRHTFTAPRVKKGKTP 194
G CAPGD+ T A G P
Sbjct: 126 GRCAPGDLTRTALAADATNGSNP 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,623,199
Number of Sequences: 37544
Number of extensions: 137446
Number of successful extensions: 368
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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