Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N12
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0335 + 4409387-4410156,4410598-4410706 32 0.13
01_06_0852 + 32463784-32463834,32463957-32464628,32465515-324656... 30 0.53
12_02_0982 - 25031778-25032122,25032388-25032534,25032693-250337... 29 0.93
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768... 28 1.6
11_02_0053 - 7797580-7798731 28 2.1
02_02_0355 + 9312814-9313650 28 2.1
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 27 2.8
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 27 3.8
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 27 3.8
02_05_0339 - 28094581-28094817,28095011-28096381,28097713-280979... 27 5.0
02_03_0081 - 14970024-14970098,14970194-14970310,14970456-149708... 27 5.0
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 26 6.6
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 26 6.6
02_05_0302 + 27698734-27699026,27699277-27699355,27699524-27699868 26 6.6
12_02_0727 - 22564183-22564815,22564906-22565073,22565264-225653... 26 8.7
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 26 8.7
06_02_0334 + 14582925-14583404,14583533-14583540,14584070-145845... 26 8.7
>04_01_0335 + 4409387-4410156,4410598-4410706
Length = 292
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 148 INGDTDDIQHDKDKTQKKTAKHDSGV--------ADLEKVTDYAEEKEISSQDI 285
I+ DDIQH KD + T+ D G A LE++ Y E + +S+ D+
Sbjct: 93 IDAGFDDIQHKKDAQEASTSVEDEGFKNVGGNYGAGLERIQFYDEGRNLSANDV 146
>01_06_0852 +
32463784-32463834,32463957-32464628,32465515-32465627,
32465999-32466261,32466803-32466924,32467176-32467253,
32467353-32467409,32467590-32467658,32467903-32467947,
32468303-32468398
Length = 521
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 112 LLIQLTKMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEKE 267
++ Q + D+E +GD + K+K++K +AD E +TD+ + E
Sbjct: 467 VVAQPESLEDDEDDGDDAEDAEGKEKSKKDQLSLKEAIADSENLTDFLMDFE 518
>12_02_0982 -
25031778-25032122,25032388-25032534,25032693-25033718,
25033758-25034227,25034393-25034471
Length = 688
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 142 EEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEKEISSQDISGALSLIGDRRN 321
E+ + D+DD D + + A D+GV D + A E E + D G + ++ D
Sbjct: 242 EDDDDDSDDHDGGPDDAEDEAAVQDAGVVD-DSGPGVAVELEHEAADQGGGVRVVDDSDG 300
Query: 322 KEAA 333
+ AA
Sbjct: 301 EGAA 304
>02_04_0480 -
23274945-23275196,23275558-23275623,23276709-23276851,
23276947-23277063,23277219-23278683,23279561-23280730
Length = 1070
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 136 ADEEINGDTDDIQHDKDKTQKKTAKHD 216
ADEE +DD++ D+ +KK ++HD
Sbjct: 123 ADEEKRKSSDDMRDGDDEEKKKRSRHD 149
>11_02_0053 - 7797580-7798731
Length = 383
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 HDKDKTQKKTAKHDSGVADL-EKVTDYAEEKEISSQDISGALSLIGDR 315
HDK K KTA+ VAD + + D +EE++ + G ++ GDR
Sbjct: 197 HDKHKNALKTAEAYDAVADAWDPLPDMSEERD----ECDGMATVAGDR 240
>02_02_0355 + 9312814-9313650
Length = 278
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 148 INGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEKE 267
++GD DD++H T + A D D V D E ++
Sbjct: 8 LHGDGDDVEHAAAMTMTEAAPRDDEPGDRRDVDDENERRQ 47
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 238 KVTDYAEEK-EISSQDISGALSLIGDR-RNKEAAE 336
K+ DY ++K E++ +DIS LIGD + KE E
Sbjct: 215 KLADYIKDKSELAEKDISKLADLIGDEDKAKEVVE 249
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 109 CLLIQLTKMADEEINGDTDDIQHDKDKTQKKTA-KHDSGVADLEKVTDYAEEKEISSQ 279
C+L L ++ +GD D Q+ ++ T++ +A K + + D +V + AE K+ + +
Sbjct: 377 CMLHFLQMQIEDRFHGDEDINQNIQENTEQASAEKGAAEIPDKMEVEEKAEGKDTAGE 434
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/51 (19%), Positives = 29/51 (56%)
Frame = +1
Query: 184 DKTQKKTAKHDSGVADLEKVTDYAEEKEISSQDISGALSLIGDRRNKEAAE 336
++ + +KH + +LEK +E E ++ D++ ++++ + +N ++E
Sbjct: 425 EEKEMLVSKHSKCLTELEKAQSSVKELESTNGDLNDKIAVLQNEKNSLSSE 475
>02_05_0339 -
28094581-28094817,28095011-28096381,28097713-28097922,
28098047-28098283,28098677-28099041,28099661-28099970
Length = 909
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 211 HDSGVADLEKVTDYAEEKEISSQDISGALSLIGDRRNKEAA 333
H+SGVA + + D ++ E+S + +G L + R E A
Sbjct: 652 HNSGVAFYQNLLDQVQDNEVSWEPYNGLLMSMPRRVRAERA 692
>02_03_0081 -
14970024-14970098,14970194-14970310,14970456-14970836,
14971345-14971424,14971925-14972075
Length = 267
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 121 QLTKMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEKEIS 273
QL ++A EE NG + K +TQK + + D + T + K+ S
Sbjct: 160 QLGEVASEEANGSLHTARLKKKETQKCSTRRKKNWLDKQHPTKKKQVKDCS 210
>11_04_0474 +
18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 181 KDKTQKKTAKHDSGVADLEKVTDYAEEKEISSQDISGALSLIGDRRNKEAAE 336
+D K + GVAD + ++AE + + G +S I R+NK E
Sbjct: 667 RDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVS-INSRKNKAVDE 717
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 139 DEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEKEISSQD 282
DEE +GD DD + + + + D G D E ++ KE S +
Sbjct: 67 DEEEDGDEDDDDEEYSDEEGEDDEDDEGEEDEEDGSEPKRRKEKGSSE 114
>02_05_0302 + 27698734-27699026,27699277-27699355,27699524-27699868
Length = 238
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 211 HDSGVADLEKVTDYAEEKEISSQDISGALSLIGDRRNKEAA 333
H+SGVA + D ++ E+S + +G L + R E A
Sbjct: 56 HNSGVAFYRNLLDQVQDNEVSWESYNGLLMSMPRRVRAERA 96
>12_02_0727 -
22564183-22564815,22564906-22565073,22565264-22565382,
22565796-22565898,22566702-22566974,22567088-22567279,
22568289-22568615
Length = 604
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 121 QLTKMADEEINGDTDDIQHDKDKTQKKTAKH----DSGVADLEKVTDYAEEKEISSQ 279
QL ++ EE++ D D D+ + + A + D V LE +TD E SSQ
Sbjct: 456 QLVSISMEELDLQESDNDDDTDRGENEPALNETDEDQAVELLETLTDNPHEPSSSSQ 512
>08_01_0519 -
4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 154 GDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEKEISSQDISGALSLIGD 312
GD D ++ D + A H++ D E EIS ++G LIGD
Sbjct: 244 GDHDAMEMDNTNEGNQAATHET-----TNFKDGVETPEISPNSVNGNSQLIGD 291
>06_02_0334 +
14582925-14583404,14583533-14583540,14584070-14584561,
14584733-14585087,14585338-14585505
Length = 500
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 112 LLIQLTKMADEEINGDTDDIQHDKDKTQK 198
L I L + + + G + QHDK++T+K
Sbjct: 408 LTIPLQTIEESRVGGTYRETQHDKERTKK 436
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,809,089
Number of Sequences: 37544
Number of extensions: 100128
Number of successful extensions: 368
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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