Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N10
(229 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 27 1.8
U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbona... 26 4.1
U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbona... 26 4.1
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 26 4.1
AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transpo... 26 4.1
AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transpo... 26 4.1
Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical pr... 25 5.5
AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical ... 25 5.5
AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical ... 25 5.5
AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical... 25 5.5
AF016683-3|AAB66193.1| 497|Caenorhabditis elegans Hypothetical ... 25 5.5
AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical ... 25 5.5
AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical ... 25 5.5
U41550-7|AAA83288.1| 103|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z81047-8|CAB02830.2| 323|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 25 9.6
>Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical
protein F49A5.4 protein.
Length = 308
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 123 AEENQFIVDDVSKIIKEAIENSIGGAAYQDNKV 221
A EN+F+ + II E SIGG AY D+ +
Sbjct: 228 ANENRFVYN----IIPPGTETSIGGVAYSDDSL 256
>U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform b protein.
Length = 883
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = -3
Query: 224 IYFIVLVSGASN*IFNSLFDYLTHIVYNE--------LIFFCQIVTFFHLHDLNATISIP 69
++FI +V A+N L Y+T +Y E LIFF ++V F HL + + +I
Sbjct: 535 LFFISIVGAATN--CAHLIHYVT--IYTEDIFCALISLIFFSEVVEFIHLQEEHNSIENL 590
Query: 68 SY 63
Y
Sbjct: 591 KY 592
>U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform a protein.
Length = 956
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = -3
Query: 224 IYFIVLVSGASN*IFNSLFDYLTHIVYNE--------LIFFCQIVTFFHLHDLNATISIP 69
++FI +V A+N L Y+T +Y E LIFF ++V F HL + + +I
Sbjct: 535 LFFISIVGAATN--CAHLIHYVT--IYTEDIFCALISLIFFSEVVEFIHLQEEHNSIENL 590
Query: 68 SY 63
Y
Sbjct: 591 KY 592
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -1
Query: 85 QRFQSQVISKQLNTN*YKNNKIFDAS 8
Q++ +Q ++Q+N+N Y N ++D S
Sbjct: 239 QQYNNQYNNQQMNSNGYNNQPMYDQS 264
>AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion
transporter ABTS-4b protein.
Length = 936
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = -3
Query: 224 IYFIVLVSGASN*IFNSLFDYLTHIVYNE--------LIFFCQIVTFFHLHDLNATISIP 69
++FI +V A+N L Y+T +Y E LIFF ++V F HL + + +I
Sbjct: 535 LFFISIVGAATN--CAHLIHYVT--IYTEDIFCALISLIFFSEVVEFIHLQEEHNSIENL 590
Query: 68 SY 63
Y
Sbjct: 591 KY 592
>AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion
transporter ABTS-4a protein.
Length = 956
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = -3
Query: 224 IYFIVLVSGASN*IFNSLFDYLTHIVYNE--------LIFFCQIVTFFHLHDLNATISIP 69
++FI +V A+N L Y+T +Y E LIFF ++V F HL + + +I
Sbjct: 535 LFFISIVGAATN--CAHLIHYVT--IYTEDIFCALISLIFFSEVVEFIHLQEEHNSIENL 590
Query: 68 SY 63
Y
Sbjct: 591 KY 592
>Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical
protein K02B7.1 protein.
Length = 742
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 188 NLCAQNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 223
>AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical
protein W03G1.4 protein.
Length = 805
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 188 NLCAQNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 223
>AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical
protein C17B7.7 protein.
Length = 805
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 188 NLCAQNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 223
>AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical
protein K02E7.3 protein.
Length = 805
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 188 NLCAQNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 223
>AF016683-3|AAB66193.1| 497|Caenorhabditis elegans Hypothetical
protein K09F6.2 protein.
Length = 497
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 174 NLCALNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 209
>AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical
protein R09E12.6 protein.
Length = 805
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 188 NLCAQNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 223
>AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical
protein Y55F3C.6 protein.
Length = 805
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 78 NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENS 188
N C +E+ +C D+ E+ Q I D+ K + E I NS
Sbjct: 188 NLCAQNIELCKCEDMQEKCQLIFGDLKKWL-EVILNS 223
>U41550-7|AAA83288.1| 103|Caenorhabditis elegans Hypothetical
protein R04A9.1 protein.
Length = 103
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = -3
Query: 158 THIVYNELIFFCQIVTFFHLHDLNATISIPS 66
+H++Y E++F ++ + + NA +++PS
Sbjct: 24 SHLIYAEMLFRILLIVTIIVTNSNAWVTVPS 54
>Z81047-8|CAB02830.2| 323|Caenorhabditis elegans Hypothetical
protein C41G6.10 protein.
Length = 323
Score = 24.6 bits (51), Expect = 9.6
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Frame = -3
Query: 209 LVSGASN*IFNSLFDYLTHIVYNELIFFCQ------IVTFFHLH----DLNATISIPSYL 60
+ +G SN I + +F +HI+ +FF I+ F H +L +T S+P+++
Sbjct: 75 ICAGYSNGILSKVFKLHSHILMTLFVFFLSLQINTLIICFLRKHKAIMNLRSTSSVPNWI 134
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 96 MEVKECNDLAEENQFIVDD 152
ME ++ N LA +NQ +VDD
Sbjct: 17 METQQKNSLAPQNQQLVDD 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,729,988
Number of Sequences: 27780
Number of extensions: 76924
Number of successful extensions: 198
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 12,740,198
effective HSP length: 55
effective length of database: 11,212,298
effective search space used: 224245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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